Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_G13
         (572 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92834-3|CAB07384.1|  328|Caenorhabditis elegans Hypothetical pr...    40   0.001
Z70782-4|CAA94842.1|  347|Caenorhabditis elegans Hypothetical pr...    38   0.007
U18781-1|AAB03374.1|  384|Caenorhabditis elegans alcohol dehydro...    37   0.009
AC006663-4|AAF39899.1|  384|Caenorhabditis elegans Hypothetical ...    37   0.009
AC006663-3|AAL32231.1|  386|Caenorhabditis elegans Hypothetical ...    37   0.009
AC025722-1|AAK68507.1|  554|Caenorhabditis elegans Hypothetical ...    36   0.027
Z70782-3|CAA94841.1|  347|Caenorhabditis elegans Hypothetical pr...    35   0.047
Z81570-2|CAB04604.1|  349|Caenorhabditis elegans Hypothetical pr...    32   0.25 
Z82081-5|CAB04958.1|  344|Caenorhabditis elegans Hypothetical pr...    32   0.33 
U10401-9|AAA19054.4|  771|Caenorhabditis elegans Hypothetical pr...    30   1.0  
U97011-2|AAB52325.2|  689|Caenorhabditis elegans Hypothetical pr...    28   4.1  
Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical pr...    28   5.4  
U88172-11|AAB42257.1|  390|Caenorhabditis elegans Hypothetical p...    28   5.4  
U88172-10|AAM97988.1|  437|Caenorhabditis elegans Hypothetical p...    28   5.4  
AF125951-1|AAD14690.3|  326|Caenorhabditis elegans Hypothetical ...    27   7.2  
AC024844-8|AAK29951.1|  421|Caenorhabditis elegans Hypothetical ...    27   7.2  
AF194964-1|AAF28314.1|  632|Caenorhabditis elegans polo-like kin...    27   9.5  
AF067618-4|AAY44003.1|  381|Caenorhabditis elegans Hypothetical ...    27   9.5  
AC024201-9|AAF36014.1|  632|Caenorhabditis elegans Polo kinase p...    27   9.5  

>Z92834-3|CAB07384.1|  328|Caenorhabditis elegans Hypothetical
           protein F39B2.3 protein.
          Length = 328

 Score = 39.9 bits (89), Expect = 0.001
 Identities = 24/56 (42%), Positives = 33/56 (58%)
 Frame = +3

Query: 405 PKTPFILGFECAGEIEQVGENVTNFKVGDQVVALPEYRAWAELVSVPAXYVYALPE 572
           P  P++ G + AG +E VGE+V N KVGD+V    E  + AE V+V     + LPE
Sbjct: 64  PNLPYVPGKDGAGFVELVGESVKNVKVGDRVWYGSEADSTAEYVAVNRP--FELPE 117



 Score = 34.7 bits (76), Expect = 0.047
 Identities = 16/51 (31%), Positives = 29/51 (56%)
 Frame = +2

Query: 242 MRAVVLTGFGGLKTVKILKKPEPTVGEGEVLIRVKACGLNFQDLIVRQGRH 394
           MRA V+  FG    ++ ++   P + + +VL+R  A G+N  D  +R G++
Sbjct: 10  MRAAVVRRFGAPDVIEAVESDMPRLEKNQVLVRNYAAGVNPVDTYIRAGQY 60


>Z70782-4|CAA94842.1|  347|Caenorhabditis elegans Hypothetical
           protein R04B5.6 protein.
          Length = 347

 Score = 37.5 bits (83), Expect = 0.007
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = +3

Query: 408 KTPFILGFECAGEIEQVGENVTNFKVGDQVVALP 509
           K P +LG E +G + ++G  V  FKVGD++   P
Sbjct: 59  KEPMVLGHESSGVVSEIGSEVKGFKVGDRIAMEP 92


>U18781-1|AAB03374.1|  384|Caenorhabditis elegans alcohol
           dehydrogenase protein.
          Length = 384

 Score = 37.1 bits (82), Expect = 0.009
 Identities = 17/31 (54%), Positives = 20/31 (64%)
 Frame = +3

Query: 414 PFILGFECAGEIEQVGENVTNFKVGDQVVAL 506
           P +LG E +G +E VGE VT F  GD VV L
Sbjct: 65  PVVLGHEGSGIVESVGEGVTGFAPGDHVVPL 95


>AC006663-4|AAF39899.1|  384|Caenorhabditis elegans Hypothetical
           protein H24K24.3a protein.
          Length = 384

 Score = 37.1 bits (82), Expect = 0.009
 Identities = 17/31 (54%), Positives = 20/31 (64%)
 Frame = +3

Query: 414 PFILGFECAGEIEQVGENVTNFKVGDQVVAL 506
           P +LG E +G +E VGE VT F  GD VV L
Sbjct: 65  PVVLGHEGSGIVESVGEGVTGFAPGDHVVPL 95


>AC006663-3|AAL32231.1|  386|Caenorhabditis elegans Hypothetical
           protein H24K24.3b protein.
          Length = 386

 Score = 37.1 bits (82), Expect = 0.009
 Identities = 17/31 (54%), Positives = 20/31 (64%)
 Frame = +3

Query: 414 PFILGFECAGEIEQVGENVTNFKVGDQVVAL 506
           P +LG E +G +E VGE VT F  GD VV L
Sbjct: 67  PVVLGHEGSGIVESVGEGVTGFAPGDHVVPL 97


>AC025722-1|AAK68507.1|  554|Caenorhabditis elegans Hypothetical
           protein Y50D4C.2 protein.
          Length = 554

 Score = 35.5 bits (78), Expect = 0.027
 Identities = 16/31 (51%), Positives = 20/31 (64%)
 Frame = +3

Query: 414 PFILGFECAGEIEQVGENVTNFKVGDQVVAL 506
           P +LG E +G +E VG+ VT F  GD VV L
Sbjct: 238 PVVLGHEGSGIVESVGKGVTGFAPGDHVVPL 268


>Z70782-3|CAA94841.1|  347|Caenorhabditis elegans Hypothetical
           protein R04B5.5 protein.
          Length = 347

 Score = 34.7 bits (76), Expect = 0.047
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = +3

Query: 408 KTPFILGFECAGEIEQVGENVTNFKVGDQVVALP 509
           K P I+G E +G + +VG  V + KVGD++   P
Sbjct: 59  KEPMIVGHETSGIVSEVGNEVKHLKVGDRIAMEP 92


>Z81570-2|CAB04604.1|  349|Caenorhabditis elegans Hypothetical
           protein K12G11.3 protein.
          Length = 349

 Score = 32.3 bits (70), Expect = 0.25
 Identities = 12/27 (44%), Positives = 20/27 (74%)
 Frame = +3

Query: 414 PFILGFECAGEIEQVGENVTNFKVGDQ 494
           P + G E AG + Q+G+NVT +++GD+
Sbjct: 64  PLVGGHEGAGSVVQIGKNVTGWQLGDK 90


>Z82081-5|CAB04958.1|  344|Caenorhabditis elegans Hypothetical
           protein W09H1.5 protein.
          Length = 344

 Score = 31.9 bits (69), Expect = 0.33
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = +3

Query: 405 PKTPFILGFECAGEIEQVGENVTNFKVGDQVV 500
           P  P + G E  G++  VG NV++ KVGD V+
Sbjct: 73  PALPAVGGNEGFGKVISVGSNVSSIKVGDHVI 104


>U10401-9|AAA19054.4|  771|Caenorhabditis elegans Hypothetical
           protein T20B12.1 protein.
          Length = 771

 Score = 30.3 bits (65), Expect = 1.0
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = -1

Query: 506 KSHHLIAHLKIGDIFANLLDFTSAFEAQDERSLR 405
           K +  + H+ +GDI  NL  FT A E  D+R+ R
Sbjct: 419 KPNDSMLHVYLGDITRNLEYFTKAIELSDDRNAR 452


>U97011-2|AAB52325.2|  689|Caenorhabditis elegans Hypothetical
           protein F31F7.2 protein.
          Length = 689

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 11/41 (26%), Positives = 23/41 (56%)
 Frame = +3

Query: 411 TPFILGFECAGEIEQVGENVTNFKVGDQVVALPEYRAWAEL 533
           TP I  F+   EI+ + + ++  K+G   VA+ ++  W+ +
Sbjct: 98  TPQITSFQHRAEIDFLRQVMSTMKMGSSKVAMAQFTPWSRI 138


>Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical
           protein C34F6.1 protein.
          Length = 1043

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 11/34 (32%), Positives = 21/34 (61%)
 Frame = +1

Query: 118 RRRDSSTGEDPDRKWCY*NTARGNARKIYRGEKG 219
           +RRD+  G++   +W + N A+   R +Y+G +G
Sbjct: 241 QRRDTGEGDELVARWYFDNQAKECRRFLYKGIRG 274


>U88172-11|AAB42257.1|  390|Caenorhabditis elegans Hypothetical
           protein ZK354.2a protein.
          Length = 390

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 13/26 (50%), Positives = 18/26 (69%)
 Frame = -3

Query: 333 RTSPSPTVGSGFLSILTVLRPPKPVS 256
           RT+P  T  +GF  +LTV+R PK V+
Sbjct: 262 RTTPETT--AGFFDLLTVIREPKDVA 285


>U88172-10|AAM97988.1|  437|Caenorhabditis elegans Hypothetical
           protein ZK354.2b protein.
          Length = 437

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 13/26 (50%), Positives = 18/26 (69%)
 Frame = -3

Query: 333 RTSPSPTVGSGFLSILTVLRPPKPVS 256
           RT+P  T  +GF  +LTV+R PK V+
Sbjct: 262 RTTPETT--AGFFDLLTVIREPKDVA 285


>AF125951-1|AAD14690.3|  326|Caenorhabditis elegans Hypothetical
           protein D2063.1 protein.
          Length = 326

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 13/43 (30%), Positives = 25/43 (58%)
 Frame = +2

Query: 245 RAVVLTGFGGLKTVKILKKPEPTVGEGEVLIRVKACGLNFQDL 373
           RA++   +GG   +K L  P+P   E E+L++++  G+   D+
Sbjct: 11  RALIFESYGGPLEIKQLPIPQP--NEDELLVKMEYSGICHSDV 51


>AC024844-8|AAK29951.1|  421|Caenorhabditis elegans Hypothetical
           protein Y65B4A.9 protein.
          Length = 421

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = -3

Query: 333 RTSPSPTVGSGFLSILTVLRPPKPVS 256
           RT+P  T  +GF  +LT++R PK V+
Sbjct: 262 RTTPETT--AGFFDLLTIIREPKDVA 285


>AF194964-1|AAF28314.1|  632|Caenorhabditis elegans polo-like kinase
           2 protein.
          Length = 632

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +3

Query: 453 QVGENVTNFKVGDQVVALPEYRAW 524
           Q G+ VT  KVGD +  LP  R W
Sbjct: 488 QAGQQVTR-KVGDDLARLPTLRVW 510


>AF067618-4|AAY44003.1|  381|Caenorhabditis elegans Hypothetical
           protein F56H1.6 protein.
          Length = 381

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
 Frame = +2

Query: 284 VKILKKPEPTVGE-GEVLIRVKACGLNFQDLIVRQGRHR 397
           V++ + P P + + G+VL++VKA  +N  D+ + QG  R
Sbjct: 29  VELKEVPLPVINKPGQVLLKVKAASVNPIDVDMSQGYGR 67


>AC024201-9|AAF36014.1|  632|Caenorhabditis elegans Polo kinase
           protein 2 protein.
          Length = 632

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +3

Query: 453 QVGENVTNFKVGDQVVALPEYRAW 524
           Q G+ VT  KVGD +  LP  R W
Sbjct: 488 QAGQQVTR-KVGDDLARLPTLRVW 510


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,282,044
Number of Sequences: 27780
Number of extensions: 211147
Number of successful extensions: 513
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 492
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 513
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1184216096
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)