Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_G13
(572 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g21580.1 68417.m03122 oxidoreductase, zinc-binding dehydrogen... 59 2e-09
At5g51970.2 68418.m06450 sorbitol dehydrogenase, putative / L-id... 45 4e-05
At5g51970.1 68418.m06449 sorbitol dehydrogenase, putative / L-id... 45 4e-05
At3g56460.1 68416.m06279 oxidoreductase, zinc-binding dehydrogen... 42 4e-04
At1g49670.1 68414.m05570 ARP protein (REF) identical to ARP prot... 40 9e-04
At4g13010.1 68417.m02030 oxidoreductase, zinc-binding dehydrogen... 39 0.002
At1g22430.1 68414.m02804 alcohol dehydrogenase, putative similar... 39 0.002
At5g24760.2 68418.m02922 alcohol dehydrogenase, putative similar... 38 0.004
At5g24760.1 68418.m02923 alcohol dehydrogenase, putative similar... 38 0.004
At5g43940.1 68418.m05376 alcohol dehydrogenase class III / gluta... 38 0.006
At4g22110.2 68417.m03197 alcohol dehydrogenase, putative similar... 37 0.008
At4g22110.1 68417.m03196 alcohol dehydrogenase, putative similar... 37 0.008
At5g61510.1 68418.m07718 NADP-dependent oxidoreductase, putative... 37 0.011
At1g22440.1 68414.m02805 alcohol dehydrogenase, putative similar... 37 0.011
At3g15090.1 68416.m01908 oxidoreductase, zinc-binding dehydrogen... 36 0.025
At1g72680.1 68414.m08405 cinnamyl-alcohol dehydrogenase, putativ... 36 0.025
At3g45770.2 68416.m04947 oxidoreductase, zinc-binding dehydrogen... 35 0.034
At3g45770.1 68416.m04948 oxidoreductase, zinc-binding dehydrogen... 35 0.034
At1g77120.1 68414.m08982 alcohol dehydrogenase (ADH) identical t... 34 0.077
At1g64710.1 68414.m07337 alcohol dehydrogenase, putative similar... 33 0.14
At1g32780.1 68414.m04041 alcohol dehydrogenase, putative similar... 33 0.14
At2g21890.1 68415.m02601 mannitol dehydrogenase, putative simila... 33 0.18
At2g21730.1 68415.m02585 mannitol dehydrogenase, putative simila... 33 0.18
At1g23740.1 68414.m02996 oxidoreductase, zinc-binding dehydrogen... 33 0.18
At5g42250.1 68418.m05143 alcohol dehydrogenase, putative similar... 32 0.31
At4g39330.1 68417.m05568 mannitol dehydrogenase, putative nearly... 32 0.31
At4g37970.1 68417.m05366 mannitol dehydrogenase, putative simila... 32 0.31
At4g34230.1 68417.m04864 cinnamyl-alcohol dehydrogenase, putativ... 31 0.41
At3g19450.1 68416.m02466 cinnamyl-alcohol dehydrogenase (CAD) id... 31 0.41
At3g46100.1 68416.m04988 histidyl-tRNA synthetase / histidine--t... 29 2.9
At2g35380.1 68415.m04337 peroxidase 20 (PER20) (P20) identical t... 29 2.9
At5g64840.1 68418.m08157 ABC transporter family protein 28 5.1
At5g05560.1 68418.m00604 E3 ubiquitin ligase, putative E3, ubiqu... 28 5.1
At4g37980.1 68417.m05367 mannitol dehydrogenase, putative (ELI3-... 28 5.1
At5g63620.2 68418.m07988 oxidoreductase, zinc-binding dehydrogen... 27 6.7
At5g63620.1 68418.m07987 oxidoreductase, zinc-binding dehydrogen... 27 6.7
At1g63630.1 68414.m07195 pentatricopeptide (PPR) repeat-containi... 27 6.7
At5g63560.1 68418.m07977 transferase family protein similar to h... 27 8.9
>At4g21580.1 68417.m03122 oxidoreductase, zinc-binding dehydrogenase
family protein Pig3 Homo sapiens, PID:G2754812; contains
Pfam zinc-binding dehydrogenase domain PF00107
Length = 325
Score = 58.8 bits (136), Expect = 2e-09
Identities = 28/56 (50%), Positives = 37/56 (66%)
Frame = +3
Query: 402 PPKTPFILGFECAGEIEQVGENVTNFKVGDQVVALPEYRAWAELVSVPAXYVYALP 569
PP + LG EC+G IE VG+ V+ +KVGDQV AL +AE VSVPA ++ +P
Sbjct: 54 PPGSSPYLGLECSGTIESVGKGVSRWKVGDQVCALLSGGGYAEKVSVPAGQIFPIP 109
Score = 37.1 bits (82), Expect = 0.008
Identities = 22/63 (34%), Positives = 35/63 (55%)
Frame = +2
Query: 242 MRAVVLTGFGGLKTVKILKKPEPTVGEGEVLIRVKACGLNFQDLIVRQGRHRLSTEDSFH 421
M+A+V++ G + +++ +P V + EVLIRV A LN D + R G + S +
Sbjct: 1 MKAIVISEPGKPEVLQLRDVADPEVKDDEVLIRVLATALNRADTLQRLGLYNPPPGSSPY 60
Query: 422 LGL 430
LGL
Sbjct: 61 LGL 63
>At5g51970.2 68418.m06450 sorbitol dehydrogenase, putative /
L-iditol 2-dehydrogenase, putative similar to
NAD-dependent sorbitol dehydrogenase from Malus x
domestica [gi:4519539]
Length = 364
Score = 44.8 bits (101), Expect = 4e-05
Identities = 19/39 (48%), Positives = 24/39 (61%)
Frame = +3
Query: 408 KTPFILGFECAGEIEQVGENVTNFKVGDQVVALPEYRAW 524
K P ++G ECAG IE+VGE V + VGD+V P W
Sbjct: 72 KEPMVIGHECAGIIEEVGEEVKHLVVGDRVALEPGISCW 110
>At5g51970.1 68418.m06449 sorbitol dehydrogenase, putative /
L-iditol 2-dehydrogenase, putative similar to
NAD-dependent sorbitol dehydrogenase from Malus x
domestica [gi:4519539]
Length = 364
Score = 44.8 bits (101), Expect = 4e-05
Identities = 19/39 (48%), Positives = 24/39 (61%)
Frame = +3
Query: 408 KTPFILGFECAGEIEQVGENVTNFKVGDQVVALPEYRAW 524
K P ++G ECAG IE+VGE V + VGD+V P W
Sbjct: 72 KEPMVIGHECAGIIEEVGEEVKHLVVGDRVALEPGISCW 110
>At3g56460.1 68416.m06279 oxidoreductase, zinc-binding dehydrogenase
family protein low similarity to probable NADP-dependent
oxidoreductase (zeta-crystallin homolog) P1
[SP|Q39172][gi:886428] and P2 [SP|Q39173][gi:886430],
zeta-crystallin / quinone reductase (NADPH) - Mus
musculus, PIR:A54932; contains Pfam profile PF00107:
oxidoreductase, zinc-binding dehydrogenase family
Length = 348
Score = 41.5 bits (93), Expect = 4e-04
Identities = 17/56 (30%), Positives = 33/56 (58%)
Frame = +3
Query: 405 PKTPFILGFECAGEIEQVGENVTNFKVGDQVVALPEYRAWAELVSVPAXYVYALPE 572
P PFI G + +G ++ +G VT F+VGD+V + + ++A+ + ++ +PE
Sbjct: 66 PPLPFIPGSDYSGIVDAIGPAVTKFRVGDRVCSFADLGSFAQFIVADQSRLFLVPE 121
>At1g49670.1 68414.m05570 ARP protein (REF) identical to ARP protein
GB:CAA89858 GI:886434 from [Arabidopsis thaliana];
contains Pfam profile PF00107: oxidoreductase,
zinc-binding dehydrogenase family
Length = 629
Score = 40.3 bits (90), Expect = 9e-04
Identities = 22/55 (40%), Positives = 32/55 (58%)
Frame = +3
Query: 405 PKTPFILGFECAGEIEQVGENVTNFKVGDQVVALPEYRAWAELVSVPAXYVYALP 569
PK PF GFE G I VGE+V N +VG A+ + A++E + V + +V +P
Sbjct: 346 PKLPFDAGFEGVGLIAAVGESVKNLEVGTP-AAVMTFGAYSEYMIVSSKHVLPVP 399
>At4g13010.1 68417.m02030 oxidoreductase, zinc-binding dehydrogenase
family protein low similarity to probable NADP-dependent
oxidoreductase (zeta-crystallin homolog) P1
[SP|Q39172][gi:886428] and P2 [SP|Q39173][gi:886430];
contains Pfam profile PF00107: oxidoreductase,
zinc-binding dehydrogenase family
Length = 329
Score = 39.1 bits (87), Expect = 0.002
Identities = 18/35 (51%), Positives = 23/35 (65%)
Frame = +3
Query: 402 PPKTPFILGFECAGEIEQVGENVTNFKVGDQVVAL 506
P K P I + AGE+ +VG V NFK GD+VVA+
Sbjct: 62 PRKFPCIPATDVAGEVVEVGSGVKNFKAGDKVVAV 96
>At1g22430.1 68414.m02804 alcohol dehydrogenase, putative similar to
alcohol dehydrogenase ADH GI:7705214 from [Lycopersicon
esculentum]; contains Pfam zinc-binding dehydrogenase
domain PF00107
Length = 388
Score = 39.1 bits (87), Expect = 0.002
Identities = 19/39 (48%), Positives = 23/39 (58%)
Frame = +3
Query: 414 PFILGFECAGEIEQVGENVTNFKVGDQVVALPEYRAWAE 530
P ILG E G +E +GENV FK GD V LP + + E
Sbjct: 71 PRILGHEAVGVVESIGENVDGFKQGD--VVLPVFHPYCE 107
>At5g24760.2 68418.m02922 alcohol dehydrogenase, putative similar to
alcohol dehydrogenase from Solanum tuberosum
[SP|p14673]; contains Pfam zinc-binding dehydrogenase
domain PF00107
Length = 352
Score = 38.3 bits (85), Expect = 0.004
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = +3
Query: 390 AIDSPPKTPFILGFECAGEIEQVGENVTNFKVGDQVVAL 506
A +S P I G E AG +E +GE VT F+ GD V+A+
Sbjct: 30 AWESQSLLPRIFGHEAAGIVESIGEGVTEFEKGDHVLAV 68
>At5g24760.1 68418.m02923 alcohol dehydrogenase, putative similar to
alcohol dehydrogenase from Solanum tuberosum
[SP|p14673]; contains Pfam zinc-binding dehydrogenase
domain PF00107
Length = 381
Score = 38.3 bits (85), Expect = 0.004
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = +3
Query: 390 AIDSPPKTPFILGFECAGEIEQVGENVTNFKVGDQVVAL 506
A +S P I G E AG +E +GE VT F+ GD V+A+
Sbjct: 59 AWESQSLLPRIFGHEAAGIVESIGEGVTEFEKGDHVLAV 97
>At5g43940.1 68418.m05376 alcohol dehydrogenase class III /
glutathione-dependent formaldehyde dehydrogenase /
GSH-FDH (ADHIII) identical to gi:1143388
Length = 379
Score = 37.5 bits (83), Expect = 0.006
Identities = 19/36 (52%), Positives = 23/36 (63%)
Frame = +3
Query: 414 PFILGFECAGEIEQVGENVTNFKVGDQVVALPEYRA 521
P ILG E AG +E VGE VT + GD V+ P Y+A
Sbjct: 64 PCILGHEAAGIVESVGEGVTEVQAGDHVI--PCYQA 97
>At4g22110.2 68417.m03197 alcohol dehydrogenase, putative similar to
alcohol dehydrogenase ADH GI:7705214 from [Lycopersicon
esculentum]; contains Pfam zinc-binding dehydrogenase
domain PF00107
Length = 389
Score = 37.1 bits (82), Expect = 0.008
Identities = 22/48 (45%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +3
Query: 393 IDSPP--KTPFILGFECAGEIEQVGENVTNFKVGDQVVALPEYRAWAE 530
IDS P + P ILG E G IE +GE+V F+ GD V LP + E
Sbjct: 63 IDSGPLARFPRILGHEAVGVIESIGEHVNGFQQGD--VVLPVFHPHCE 108
>At4g22110.1 68417.m03196 alcohol dehydrogenase, putative similar to
alcohol dehydrogenase ADH GI:7705214 from [Lycopersicon
esculentum]; contains Pfam zinc-binding dehydrogenase
domain PF00107
Length = 389
Score = 37.1 bits (82), Expect = 0.008
Identities = 22/48 (45%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +3
Query: 393 IDSPP--KTPFILGFECAGEIEQVGENVTNFKVGDQVVALPEYRAWAE 530
IDS P + P ILG E G IE +GE+V F+ GD V LP + E
Sbjct: 63 IDSGPLARFPRILGHEAVGVIESIGEHVNGFQQGD--VVLPVFHPHCE 108
>At5g61510.1 68418.m07718 NADP-dependent oxidoreductase, putative
similar to zeta-crystallin homolog TED2 from Zinnia
elegans [gi:531096]; contains Pfam zinc-binding
dehydrogenase domain PF00107
Length = 406
Score = 36.7 bits (81), Expect = 0.011
Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = +3
Query: 378 FVRXAIDSPPKTPFILGFECAGEIEQVGENVTNFKVGDQVV-ALPEYRAWAELVSVPAXY 554
+ R + P PF G E GE+ VG +T +GD V A A+AE +PA
Sbjct: 128 YFRKGVYKPASMPFTPGMEAVGEVVAVGSGLTGRMIGDLVAYAGNPMGAYAEEQILPADK 187
Query: 555 VYALP 569
V +P
Sbjct: 188 VVPVP 192
Score = 31.1 bits (67), Expect = 0.55
Identities = 16/40 (40%), Positives = 26/40 (65%), Gaps = 3/40 (7%)
Frame = +2
Query: 287 KILKKPEPTVGE---GEVLIRVKACGLNFQDLIVRQGRHR 397
++LK + VGE GE+ ++ KA GLNF D+ R+G ++
Sbjct: 96 EVLKWEDVEVGEPKEGEIRVKNKAIGLNFIDVYFRKGVYK 135
>At1g22440.1 68414.m02805 alcohol dehydrogenase, putative similar to
alcohol dehydrogenase ADH GI:7705214 from [Lycopersicon
esculentum]; contains Pfam zinc-binding dehydrogenase
domain PF00107
Length = 386
Score = 36.7 bits (81), Expect = 0.011
Identities = 21/48 (43%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +3
Query: 393 IDSPP--KTPFILGFECAGEIEQVGENVTNFKVGDQVVALPEYRAWAE 530
+DS P + P ILG E G +E +GE V FK GD V LP + E
Sbjct: 60 LDSGPLARFPRILGHEAVGVVESIGEKVDGFKQGD--VVLPVFHPQCE 105
>At3g15090.1 68416.m01908 oxidoreductase, zinc-binding dehydrogenase
family protein low similarity to NOGO-interacting
mitochondrial protein from Mus musculus [gi:14522884];
contains Pfam profile: PF00107 zinc-binding
dehydrogenases
Length = 366
Score = 35.5 bits (78), Expect = 0.025
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +2
Query: 245 RAVVLTGFGGLKTVKILKK-PEPTVGEGEVLIRVKACGLNFQDLIVRQGRHR 397
RAV+L FGG + ++ + P P + EVL++ KA +N D +R G R
Sbjct: 33 RAVILPRFGGPEVFELRENVPVPNLNPNEVLVKAKAVSVNPLDCRIRAGYGR 84
Score = 31.5 bits (68), Expect = 0.41
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +3
Query: 405 PKTPFILGFECAGEIEQVGENVTNFKVGDQV 497
P P I+G + +GE+ +G +V + KVG +V
Sbjct: 89 PHLPIIVGRDVSGEVAAIGTSVKSLKVGQEV 119
>At1g72680.1 68414.m08405 cinnamyl-alcohol dehydrogenase, putative
similar to cinnamyl-alcohol dehydrogenase GB:AAC35846
[Medicago sativa], SP|Q08350 [Picea abies]
Length = 355
Score = 35.5 bits (78), Expect = 0.025
Identities = 16/30 (53%), Positives = 19/30 (63%)
Frame = +3
Query: 408 KTPFILGFECAGEIEQVGENVTNFKVGDQV 497
K P + G E AG + +VG NV FKVGD V
Sbjct: 63 KYPLVPGHEIAGIVTKVGPNVQRFKVGDHV 92
>At3g45770.2 68416.m04947 oxidoreductase, zinc-binding dehydrogenase
family protein similar to nuclear receptor binding
factor-1 NRBF-1 - Rattus norvegicus, EMBL:AB015724;
contains Pfam zinc-binding dehydrogenase domain PF00107
Length = 297
Score = 35.1 bits (77), Expect = 0.034
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +3
Query: 405 PKTPFILGFECAGEIEQVGENVTNFKVGDQVVALP 509
P P + G+E GE+ VG NV F GD V+ P
Sbjct: 22 PPVPAVGGYEGVGEVYAVGSNVNGFSPGDWVIPSP 56
>At3g45770.1 68416.m04948 oxidoreductase, zinc-binding dehydrogenase
family protein similar to nuclear receptor binding
factor-1 NRBF-1 - Rattus norvegicus, EMBL:AB015724;
contains Pfam zinc-binding dehydrogenase domain PF00107
Length = 375
Score = 35.1 bits (77), Expect = 0.034
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +3
Query: 405 PKTPFILGFECAGEIEQVGENVTNFKVGDQVVALP 509
P P + G+E GE+ VG NV F GD V+ P
Sbjct: 100 PPVPAVGGYEGVGEVYAVGSNVNGFSPGDWVIPSP 134
>At1g77120.1 68414.m08982 alcohol dehydrogenase (ADH) identical to
alcohol dehydrogenase GI:469467 from (Arabidopsis
thaliana)
Length = 379
Score = 33.9 bits (74), Expect = 0.077
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +3
Query: 405 PKTPFILGFECAGEIEQVGENVTNFKVGDQVVAL 506
P P I G E G +E VGE VT+ + GD V+ +
Sbjct: 61 PLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPI 94
>At1g64710.1 68414.m07337 alcohol dehydrogenase, putative similar to
alcohol dehydrogenase GI:551257 from [Nicotiana tabacum]
Length = 396
Score = 33.1 bits (72), Expect = 0.14
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = +3
Query: 414 PFILGFECAGEIEQVGENVTNFKVGDQVVAL 506
P ILG E AG +E VGE V GD V+ +
Sbjct: 81 PRILGHEAAGIVESVGEGVEEMMAGDHVLPI 111
>At1g32780.1 68414.m04041 alcohol dehydrogenase, putative similar to
alcohol dehydrogenase GB:CAA37333 GI:297178 from
[Solanum tuberosum]; contains Pfam zinc-binding
dehydrogenase domain PF00107
Length = 394
Score = 33.1 bits (72), Expect = 0.14
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = +3
Query: 414 PFILGFECAGEIEQVGENVTNFKVGDQVV 500
P ILG E G +E VGE V + K GD V+
Sbjct: 66 PRILGHEAVGIVESVGEGVKDVKEGDYVI 94
>At2g21890.1 68415.m02601 mannitol dehydrogenase, putative similar
to ELI3-2 (SP|Q02972), sinapyl alcohol dehydrogenase
(Populus tremuloides) (gi:14279694); contains Pfam
zinc-binding dehydrogenase domain PF00107
Length = 375
Score = 32.7 bits (71), Expect = 0.18
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +3
Query: 414 PFILGFECAGEIEQVGENVTNFKVGDQV 497
P I G E G +VG+NVT FK GD+V
Sbjct: 61 PIIPGHEIVGIATKVGKNVTKFKEGDRV 88
>At2g21730.1 68415.m02585 mannitol dehydrogenase, putative similar
to ELI3-2 (SP|Q02972), sinapyl alcohol dehydrogenase
(Populus tremuloides) (gi:14279694); contains Pfam
zinc-binding dehydrogenase domain PF00107
Length = 376
Score = 32.7 bits (71), Expect = 0.18
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +3
Query: 414 PFILGFECAGEIEQVGENVTNFKVGDQV 497
P I G E G +VG+NVT FK GD+V
Sbjct: 61 PIIPGHEIVGIATKVGKNVTKFKEGDRV 88
>At1g23740.1 68414.m02996 oxidoreductase, zinc-binding dehydrogenase
family protein contains Pfam profile PF00107:
oxidoreductase, zinc-binding dehydrogenase family
Length = 386
Score = 32.7 bits (71), Expect = 0.18
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +2
Query: 242 MRAVVLTGFGGLKTVKILKK-PEPTVGEGEVLIRVKACGLNFQDLIVRQGRHR 397
M+A V + +GG+ +K+ P + E +VLI+V A LN D RQG+ +
Sbjct: 78 MKAWVYSDYGGVDVLKLESNIVVPEIKEDQVLIKVVAAALNPVDAKRRQGKFK 130
>At5g42250.1 68418.m05143 alcohol dehydrogenase, putative similar to
alcohol dehydrogenase ADH GI:7705214 from [Lycopersicon
esculentum]; contains Pfam zinc-binding dehydrogenase
domain PF00107
Length = 390
Score = 31.9 bits (69), Expect = 0.31
Identities = 16/33 (48%), Positives = 18/33 (54%)
Frame = +3
Query: 402 PPKTPFILGFECAGEIEQVGENVTNFKVGDQVV 500
P P ILG E G +E VGENV GD V+
Sbjct: 69 PACFPRILGHEAIGVVESVGENVKEVVEGDTVL 101
>At4g39330.1 68417.m05568 mannitol dehydrogenase, putative nearly
identical to SP|P42734, probable mannitol dehydrogenase
Length = 360
Score = 31.9 bits (69), Expect = 0.31
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +3
Query: 414 PFILGFECAGEIEQVGENVTNFKVGDQV 497
P + G E G +VG+NVT FK GD+V
Sbjct: 67 PVVPGHEIVGIATKVGKNVTKFKEGDRV 94
>At4g37970.1 68417.m05366 mannitol dehydrogenase, putative similar
to ELI3-2 (SP|Q02972), sinapyl alcohol dehydrogenase
(Populus tremuloides) (gi:14279694); contains Pfam
zinc-binding dehydrogenase domain PF00107
Length = 363
Score = 31.9 bits (69), Expect = 0.31
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +3
Query: 414 PFILGFECAGEIEQVGENVTNFKVGDQV 497
P + G E GE+ ++G V+ F +GD+V
Sbjct: 68 PLVPGHEIIGEVSEIGNKVSKFNLGDKV 95
>At4g34230.1 68417.m04864 cinnamyl-alcohol dehydrogenase, putative
similar to cinnamyl alcohol dehydrogenase, Nicotiana
tabacum [SP|P30359], Populus deltoides, PATCHX:G288753
Length = 357
Score = 31.5 bits (68), Expect = 0.41
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +3
Query: 414 PFILGFECAGEIEQVGENVTNFKVGDQV 497
P + G E GE+ +VG +V+ F VGD V
Sbjct: 64 PMVPGHEVVGEVVEVGSDVSKFTVGDIV 91
>At3g19450.1 68416.m02466 cinnamyl-alcohol dehydrogenase (CAD)
identical to SP|P48523 Cinnamyl-alcohol dehydrogenase
(EC 1.1.1.195) (CAD) [Arabidopsis thaliana]
Length = 365
Score = 31.5 bits (68), Expect = 0.41
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +3
Query: 414 PFILGFECAGEIEQVGENVTNFKVGDQV 497
P + G E GE+ +VG +V+ F VGD V
Sbjct: 65 PMVPGHEVVGEVLEVGSDVSKFTVGDVV 92
>At3g46100.1 68416.m04988 histidyl-tRNA synthetase / histidine--tRNA
ligase identical to histidyl-tRNA synthetase
[Arabidopsis thaliana] GI:3659909
Length = 486
Score = 28.7 bits (61), Expect = 2.9
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = -3
Query: 540 QIPARPKRGTREEPPLDRPP*NW--*HFRQLARFH 442
+I P +GTR+ PP D NW HF++++R +
Sbjct: 66 KIDVNPPKGTRDFPPEDMRLRNWLFNHFKEVSRLY 100
>At2g35380.1 68415.m04337 peroxidase 20 (PER20) (P20) identical to
SP|Q9SLH7 Peroxidase 20 precursor (EC 1.11.1.7) (Atperox
P20) (ATP28a) {Arabidopsis thaliana}
Length = 336
Score = 28.7 bits (61), Expect = 2.9
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +2
Query: 302 PEPTVGEGEVLIRVKACGLNFQDLIVRQGRHRL 400
P P ++I K GLN QDLI G H +
Sbjct: 167 PAPNSSLDSLIINFKQQGLNIQDLIALSGAHTI 199
>At5g64840.1 68418.m08157 ABC transporter family protein
Length = 692
Score = 27.9 bits (59), Expect = 5.1
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = -3
Query: 375 IKSWKFRPQAFTRIRTSPSPTVGSGFLSILTVLRPPKPVST 253
+ S R FT +RTSP P S F+ I ++ P + +ST
Sbjct: 7 LHSLDLRSTFFTGLRTSPIP---SNFIKISSISNPRRDIST 44
>At5g05560.1 68418.m00604 E3 ubiquitin ligase, putative E3, ubiquitin
ligase; contains similarity to Apc1/Tsg24 protein, the
largest subunit of human anaphase-promoting complex
(APC/C) GI:11967711 from [Homo sapiens]
Length = 1678
Score = 27.9 bits (59), Expect = 5.1
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +1
Query: 445 KSSKLAKMSPILRWAIKWWLFPSTAL 522
K+SKL K IL W +KW+ PS ++
Sbjct: 1608 KNSKLQKDIIILSWYLKWFNVPSPSI 1633
>At4g37980.1 68417.m05367 mannitol dehydrogenase, putative (ELI3-1)
identical to GI:16267
Length = 357
Score = 27.9 bits (59), Expect = 5.1
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +3
Query: 414 PFILGFECAGEIEQVGENVTNFKVGDQV 497
P + G E G + +VG V F GD+V
Sbjct: 63 PLVPGHEIVGVVTEVGAKVKKFNAGDKV 90
>At5g63620.2 68418.m07988 oxidoreductase, zinc-binding dehydrogenase
family protein contains PFAM zinc-binding dehydrogenase
domain PF00107
Length = 427
Score = 27.5 bits (58), Expect = 6.7
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 308 PTVGEGEVLIRVKACGLNFQDLIVRQG 388
P E+LI+ KACG+ DL V +G
Sbjct: 76 PRPKSNEILIKTKACGVCHSDLHVMKG 102
>At5g63620.1 68418.m07987 oxidoreductase, zinc-binding dehydrogenase
family protein contains PFAM zinc-binding dehydrogenase
domain PF00107
Length = 427
Score = 27.5 bits (58), Expect = 6.7
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 308 PTVGEGEVLIRVKACGLNFQDLIVRQG 388
P E+LI+ KACG+ DL V +G
Sbjct: 76 PRPKSNEILIKTKACGVCHSDLHVMKG 102
>At1g63630.1 68414.m07195 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 257
Score = 27.5 bits (58), Expect = 6.7
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +1
Query: 433 NALVKSSKLAKMSPILRWAIKWWLFPST 516
NA VK K+++ I + ++W +FP+T
Sbjct: 88 NAFVKERKVSEAEEIYKEMLRWSIFPTT 115
>At5g63560.1 68418.m07977 transferase family protein similar to
hypersensitivity-related gene product HSR201 - Nicotiana
tabacum, EMBL:X95343; contains Pfam transferase family
domain PF00248
Length = 426
Score = 27.1 bits (57), Expect = 8.9
Identities = 14/49 (28%), Positives = 23/49 (46%)
Frame = +3
Query: 384 RXAIDSPPKTPFILGFECAGEIEQVGENVTNFKVGDQVVALPEYRAWAE 530
R ++ PP + F+C G + +G N F D + A+ +WAE
Sbjct: 134 RNILEIPPVVVQVTNFKCGGFVLGLGMNHNMF---DGIAAMEFLNSWAE 179
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,964,234
Number of Sequences: 28952
Number of extensions: 209656
Number of successful extensions: 632
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 608
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 632
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1112061928
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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