Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_G11
(625 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_8304| Best HMM Match : PLAT (HMM E-Value=0) 32 0.33
SB_44862| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.43
SB_52732| Best HMM Match : M (HMM E-Value=0.019) 31 0.76
SB_22653| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_17610| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_22570| Best HMM Match : Filament (HMM E-Value=0.1) 29 3.1
SB_3185| Best HMM Match : Sec63 (HMM E-Value=0) 29 4.1
SB_44315| Best HMM Match : M (HMM E-Value=2.2e-10) 28 5.4
SB_25881| Best HMM Match : SNARE (HMM E-Value=9.8) 28 5.4
SB_4910| Best HMM Match : HECT (HMM E-Value=5.8e-33) 28 5.4
SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20) 28 5.4
SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30) 28 7.1
SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_43708| Best HMM Match : TPR_2 (HMM E-Value=0.011) 28 7.1
SB_35649| Best HMM Match : M (HMM E-Value=6e-09) 27 9.4
SB_13066| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_320| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
>SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3760
Score = 33.9 bits (74), Expect = 0.11
Identities = 25/98 (25%), Positives = 45/98 (45%), Gaps = 12/98 (12%)
Frame = +2
Query: 305 NGKAXEAL---EQSRQNIERTAEELRKAHPDVEK------NATALREKLQAAVQNTVQES 457
NGKA E + E+ IE E++RKA+ ++EK + + +L + ++N + E
Sbjct: 1930 NGKATEMVKKNEEKNNEIEEMREKMRKANEEIEKILSKNSKLSDILNELNSGIENILNEE 1989
Query: 458 XKLAXXVSSNVQXTNEK---LAPKINAAYDDFAXNTQE 562
+ +Q EK L ++N ++ N QE
Sbjct: 1990 TLSDSDPNVKLQKLREKFENLEKQVNNVKEEAEKNVQE 2027
>SB_8304| Best HMM Match : PLAT (HMM E-Value=0)
Length = 1182
Score = 32.3 bits (70), Expect = 0.33
Identities = 18/70 (25%), Positives = 31/70 (44%)
Frame = +2
Query: 299 DANGKAXEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESXKLAXXV 478
D K + +E+ +Q+ +E VE+N +EK AVQN + E ++A
Sbjct: 552 DKQEKENKQVEEEQQDEPVKQDEQENRDEPVEQNEQEKQEKALDAVQNIINEELRMAAAE 611
Query: 479 SSNVQXTNEK 508
+ N+K
Sbjct: 612 ERKKEIENKK 621
>SB_44862| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 438
Score = 31.9 bits (69), Expect = 0.43
Identities = 17/50 (34%), Positives = 22/50 (44%)
Frame = -3
Query: 371 GAPRPCARCSASTVPKPXWPCRSRLRALPWRLLAKALSCCSTDSEPSFQA 222
G PC+RC + P P R + WR LA ALS +T + A
Sbjct: 95 GQNNPCSRCGLLSCPTTTSP-EKRRKTPSWRTLAPALSPSATQPAACYDA 143
>SB_52732| Best HMM Match : M (HMM E-Value=0.019)
Length = 1366
Score = 31.1 bits (67), Expect = 0.76
Identities = 30/112 (26%), Positives = 50/112 (44%), Gaps = 10/112 (8%)
Frame = +2
Query: 320 EALEQSRQNIERTAEE-LRKAHPDVEKNATALR---------EKLQAAVQNTVQESXKLA 469
E EQ+RQ +E T + + H +VE + L+ EKL Q TVQ+ +
Sbjct: 700 EDAEQARQALEETMHTTIEELHEEVETLRSRLQDVGQAKLEAEKLVQDTQATVQQQSEEV 759
Query: 470 XXVSSNVQXTNEKLAPKINAAYDDFAXNTQEVIXXXQEAANAKQ*ASILNSH 625
+SS++ N +LA N ++ + Q + A+ Q AS+ S+
Sbjct: 760 RSLSSDIDRLNLQLAEAGNLREENASLRQQLLDTEHTRASIEAQVASMQESN 811
>SB_22653| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 737
Score = 30.7 bits (66), Expect = 1.0
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +1
Query: 127 KDIEHHTKEFHKTLEQQFNSLTKSKDAQDFSKAWKDGSESVLQQLN 264
+ IEH + K +QQF+S K+ D D S K+ + ++ L+
Sbjct: 468 RSIEHKIQRLEKKFDQQFSSTEKNMDKNDSSLPKKEIFQQIVTDLS 513
>SB_17610| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 132
Score = 30.7 bits (66), Expect = 1.0
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -3
Query: 359 PCARCSASTVPKPXWPCRSRLRALPWRLLAKALSCCSTDSEPSFQALL 216
P +RC + P P + R + L WR LA ALS +T + A L
Sbjct: 54 PWSRCGLLSCPTTTSPAKRR-KTLSWRTLAPALSPSATQPDACCDAAL 100
>SB_22570| Best HMM Match : Filament (HMM E-Value=0.1)
Length = 601
Score = 29.1 bits (62), Expect = 3.1
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +2
Query: 326 LEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESXKL 466
L Q R+N E + L+ +EK +LR++L V Q + +L
Sbjct: 103 LTQERENYETREKTLQSKITSIEKENNSLRDELNKTVSELTQTTAEL 149
>SB_3185| Best HMM Match : Sec63 (HMM E-Value=0)
Length = 2590
Score = 28.7 bits (61), Expect = 4.1
Identities = 19/68 (27%), Positives = 29/68 (42%)
Frame = +2
Query: 326 LEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESXKLAXXVSSNVQXTNE 505
L++ IE+ ++L A EKN L E +A+QNT+Q + +
Sbjct: 253 LQEYTDEIEKLKKDLFAAR---EKNGIFLSEDSYSAMQNTIQSQTSRITHFETRLPEMEA 309
Query: 506 KLAPKINA 529
A KI A
Sbjct: 310 DFAAKIEA 317
>SB_44315| Best HMM Match : M (HMM E-Value=2.2e-10)
Length = 2155
Score = 28.3 bits (60), Expect = 5.4
Identities = 23/88 (26%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Frame = +2
Query: 341 QNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESXKLAXXVSSNVQXTNEKLAPK 520
++I+ EL K + D+E+ T LRE L++ V++ + +LA + +Q L +
Sbjct: 1407 ESIQAEKSELGKRNWDLEEIVTNLREDLESLVKHRAELEEQLA-NFGAPLQTNVSHLRTE 1465
Query: 521 I-NAAYDDFAXNTQEVIXXXQEAANAKQ 601
I ++A DD + + AKQ
Sbjct: 1466 ISSSAGDDSCSSAAVSFDLKAKLKEAKQ 1493
>SB_25881| Best HMM Match : SNARE (HMM E-Value=9.8)
Length = 251
Score = 28.3 bits (60), Expect = 5.4
Identities = 10/35 (28%), Positives = 21/35 (60%)
Frame = +2
Query: 350 ERTAEELRKAHPDVEKNATALREKLQAAVQNTVQE 454
+RT EE+R+ D+++ +RE + + +N Q+
Sbjct: 172 KRTVEEIRRLDSDIQQRVVKIREDIATSGENIQQQ 206
>SB_4910| Best HMM Match : HECT (HMM E-Value=5.8e-33)
Length = 958
Score = 28.3 bits (60), Expect = 5.4
Identities = 18/53 (33%), Positives = 26/53 (49%)
Frame = -3
Query: 305 SRLRALPWRLLAKALSCCSTDSEPSFQALLKSCASFDLVSELNCCSKVLWNSL 147
S L + W L + + C + D PS L +C D +SE + C K LW +L
Sbjct: 420 SALSLITWNELERGI-CGNPDVSPS--VLKSACKYGDDLSESSECIKFLWAAL 469
>SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20)
Length = 3489
Score = 28.3 bits (60), Expect = 5.4
Identities = 23/103 (22%), Positives = 49/103 (47%)
Frame = +2
Query: 293 LGDANGKAXEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESXKLAX 472
L + N K +ALE+ R+ ++ +E ++ D+E+ L ++ + +E+ +L
Sbjct: 1961 LAEQNEKLKDALEELREAVQHLWDEKKEKERDIEQ----LNSQISSGDVQGYEETEELKA 2016
Query: 473 XVSSNVQXTNEKLAPKINAAYDDFAXNTQEVIXXXQEAANAKQ 601
+ S ++ N KL +D A +++VI +E A +
Sbjct: 2017 QL-SQLRDQNNKLD-------NDLASQSRDVITLKEENDKANE 2051
>SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30)
Length = 3071
Score = 27.9 bits (59), Expect = 7.1
Identities = 22/91 (24%), Positives = 44/91 (48%)
Frame = +2
Query: 320 EALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESXKLAXXVSSNVQXT 499
E L++ ++RTAE LRK D+E +++ L+ V+ ++E+ L + S ++ +
Sbjct: 721 ENLKRELGEVKRTAENLRK---DLEGRDEVIKQ-LRPKVKELLEENDSLKVELES-LKQS 775
Query: 500 NEKLAPKINAAYDDFAXNTQEVIXXXQEAAN 592
E L + D + +E+ +E N
Sbjct: 776 YEDLEEQYRVVEDKYLSAQKELKVLNEEGDN 806
>SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2520
Score = 27.9 bits (59), Expect = 7.1
Identities = 14/50 (28%), Positives = 27/50 (54%)
Frame = +2
Query: 305 NGKAXEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQE 454
N + EAL+ + + +E+ + +K+ TAL+E+L + VQ +E
Sbjct: 642 NNELNEALQAAETKNKAMEKEIDALKQNKDKDVTALKEELTSEVQKYKEE 691
>SB_43708| Best HMM Match : TPR_2 (HMM E-Value=0.011)
Length = 270
Score = 27.9 bits (59), Expect = 7.1
Identities = 19/56 (33%), Positives = 28/56 (50%)
Frame = +2
Query: 278 VSRAALGDANGKAXEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNT 445
V+ ALGD + EAL + + T E LR H + ALR+ + A++NT
Sbjct: 5 VTHEALGDTH----EALRDTHDALRDTHEALRDTHEALRDTHEALRD-IHEALRNT 55
>SB_35649| Best HMM Match : M (HMM E-Value=6e-09)
Length = 1279
Score = 27.5 bits (58), Expect = 9.4
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +2
Query: 329 EQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQN 442
++ + + E+ AEE +KA D + L+EKL AA+++
Sbjct: 356 KELKNSEEQKAEEEKKAKRDANDHVNQLQEKLGAAMRD 393
>SB_13066| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 27.5 bits (58), Expect = 9.4
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +2
Query: 293 LGDANGKAXEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQA 430
LG ++G E +E+ + I T +RK+ PD + L E L+A
Sbjct: 568 LGASDG---ENVEEDSKEIHLTCHSMRKSPPDTHTTSVELIESLEA 610
>SB_320| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1040
Score = 27.5 bits (58), Expect = 9.4
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +2
Query: 326 LEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESXKL 466
LE + + R A E R DVE+ + +RE V+NT E ++
Sbjct: 714 LETQMEILTRQASEYRGKLVDVEEKPSRVREVHSELVENTFAEEAQI 760
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,720,982
Number of Sequences: 59808
Number of extensions: 229926
Number of successful extensions: 984
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 876
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 975
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1548368000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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