Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_G11
(625 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g36640.1 68415.m04494 late embryogenesis abundant protein (EC... 36 0.029
At3g55050.2 68416.m06114 serine/threonine protein phosphatase 2C... 34 0.088
At3g55050.1 68416.m06113 serine/threonine protein phosphatase 2C... 34 0.088
At2g38040.2 68415.m04670 acetyl co-enzyme A carboxylase carboxyl... 31 0.82
At2g38040.1 68415.m04669 acetyl co-enzyme A carboxylase carboxyl... 31 0.82
At5g20440.1 68418.m02430 mob1/phocein family protein contains Pf... 30 1.4
At2g19950.1 68415.m02332 expressed protein contains 2 transmembr... 29 3.3
At4g27595.1 68417.m03964 protein transport protein-related low s... 28 4.4
At1g62380.1 68414.m07038 1-aminocyclopropane-1-carboxylate oxida... 28 4.4
At5g46070.1 68418.m05665 guanylate-binding family protein contai... 28 5.8
At5g20490.1 68418.m02435 myosin, putative similar to myosin (GI:... 28 5.8
At3g58840.1 68416.m06558 expressed protein 28 5.8
At2g32240.1 68415.m03940 expressed protein contains Pfam profile... 27 7.7
At2g06750.1 68415.m00753 hypothetical protein similar to At5g282... 27 7.7
>At2g36640.1 68415.m04494 late embryogenesis abundant protein
(ECP63) / LEA protein nearly identical to to LEA protein
in group 3 [Arabidopsis thaliana] GI:1526424; contains
Pfam profile PF02987: Late embryogenesis abundant
protein
Length = 448
Score = 35.5 bits (78), Expect = 0.029
Identities = 18/78 (23%), Positives = 37/78 (47%)
Frame = +2
Query: 299 DANGKAXEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESXKLAXXV 478
+A GKA E + +++N+E+ E R+ ++ L+E+ A Q Q++ +
Sbjct: 284 EAKGKAVETKDTAKENMEKAGEVTRQKMEEMRLEGKELKEEAGAKAQEASQKTRESTESG 343
Query: 479 SSNVQXTNEKLAPKINAA 532
+ + T + A + N A
Sbjct: 344 AQKAEETKDSAAVRGNEA 361
>At3g55050.2 68416.m06114 serine/threonine protein phosphatase 2C
(PP2C6) identical to Ser/Thr protein phosphatase 2C
(PP2C6) (GI:15020818) [Arabidopsis thaliana]; similar to
protein phosphatase 2C (GI:3608412) [Mesembryanthemum
crystallinum]; contains Pfam PF00481 : Protein
phosphatase 2C domain; contains TIGRFAM TIGR01573 :
CRISPR-associated protein Cas2
Length = 384
Score = 33.9 bits (74), Expect = 0.088
Identities = 21/70 (30%), Positives = 31/70 (44%)
Frame = +2
Query: 311 KAXEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESXKLAXXVSSNV 490
KA + + +IE EELR HPD + N L+ K+ V+ +Q S +
Sbjct: 188 KAVQLSTEHNASIESVREELRLLHPD-DPNIVVLKHKVW-RVKGIIQVSRSIGDAYLKRA 245
Query: 491 QXTNEKLAPK 520
+ E L PK
Sbjct: 246 EFNQEPLLPK 255
>At3g55050.1 68416.m06113 serine/threonine protein phosphatase 2C
(PP2C6) identical to Ser/Thr protein phosphatase 2C
(PP2C6) (GI:15020818) [Arabidopsis thaliana]; similar to
protein phosphatase 2C (GI:3608412) [Mesembryanthemum
crystallinum]; contains Pfam PF00481 : Protein
phosphatase 2C domain; contains TIGRFAM TIGR01573 :
CRISPR-associated protein Cas2
Length = 384
Score = 33.9 bits (74), Expect = 0.088
Identities = 21/70 (30%), Positives = 31/70 (44%)
Frame = +2
Query: 311 KAXEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESXKLAXXVSSNV 490
KA + + +IE EELR HPD + N L+ K+ V+ +Q S +
Sbjct: 188 KAVQLSTEHNASIESVREELRLLHPD-DPNIVVLKHKVW-RVKGIIQVSRSIGDAYLKRA 245
Query: 491 QXTNEKLAPK 520
+ E L PK
Sbjct: 246 EFNQEPLLPK 255
>At2g38040.2 68415.m04670 acetyl co-enzyme A carboxylase
carboxyltransferase alpha subunit family contains Pfam
profile: PF03255: Acetyl co-enzyme A carboxylase
carboxyltransferase alpha subunit
Length = 769
Score = 30.7 bits (66), Expect = 0.82
Identities = 17/89 (19%), Positives = 39/89 (43%)
Frame = +2
Query: 326 LEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESXKLAXXVSSNVQXTNE 505
L+ +QN + TAE++ A+ ++++ L +++ + ++ V+ + V+
Sbjct: 627 LDAVKQNQKDTAEQIYAANENLQEKLEKLNQEITSKIEEVVRTPEIKSMVELLKVETAKA 686
Query: 506 KLAPKINAAYDDFAXNTQEVIXXXQEAAN 592
P + AY Q++ EA N
Sbjct: 687 SKTPGVTEAYQKIEALEQQIKQKIAEALN 715
>At2g38040.1 68415.m04669 acetyl co-enzyme A carboxylase
carboxyltransferase alpha subunit family contains Pfam
profile: PF03255: Acetyl co-enzyme A carboxylase
carboxyltransferase alpha subunit
Length = 769
Score = 30.7 bits (66), Expect = 0.82
Identities = 17/89 (19%), Positives = 39/89 (43%)
Frame = +2
Query: 326 LEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESXKLAXXVSSNVQXTNE 505
L+ +QN + TAE++ A+ ++++ L +++ + ++ V+ + V+
Sbjct: 627 LDAVKQNQKDTAEQIYAANENLQEKLEKLNQEITSKIEEVVRTPEIKSMVELLKVETAKA 686
Query: 506 KLAPKINAAYDDFAXNTQEVIXXXQEAAN 592
P + AY Q++ EA N
Sbjct: 687 SKTPGVTEAYQKIEALEQQIKQKIAEALN 715
>At5g20440.1 68418.m02430 mob1/phocein family protein contains Pfam
profile: PF03637 mob1/phocein family
Length = 217
Score = 29.9 bits (64), Expect = 1.4
Identities = 12/51 (23%), Positives = 25/51 (49%)
Frame = +2
Query: 335 SRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESXKLAXXVSSN 487
S N+ RT ++ HP+ + + +RE + + ++E+ +L V N
Sbjct: 9 SSNNVVRTVPSKKRKHPEYKSKGSQIRELISGIRSDNLREAVRLPQGVDIN 59
>At2g19950.1 68415.m02332 expressed protein contains 2 transmembrane
domains; weak similarity to HPSR2 - heavy chain
potential motor protein (GI:871048) [Giardia
intestinalis]
Length = 702
Score = 28.7 bits (61), Expect = 3.3
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +2
Query: 281 SRAALGDANGKAXEALEQSRQNIERTAEELRKAHPDVEKNATALREK 421
++AAL + + +AL + ER AEE R AH + K A RE+
Sbjct: 368 NQAALNEGKLSSLQALREELATTERRAEEERSAH-NATKMAAMERER 413
>At4g27595.1 68417.m03964 protein transport protein-related low
similarity to SP|P25386 Intracellular protein transport
protein USO1 {Saccharomyces cerevisiae}
Length = 1212
Score = 28.3 bits (60), Expect = 4.4
Identities = 25/75 (33%), Positives = 34/75 (45%), Gaps = 3/75 (4%)
Frame = +2
Query: 299 DANGKAXEAL---EQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESXKLA 469
D K E+L E QNI + AEELR D K E+L AA ++ V++ KL
Sbjct: 647 DQLSKVKESLVDKETKLQNIIQEAEELRVKEIDYLKKI----EELSAAKESLVEKETKLL 702
Query: 470 XXVSSNVQXTNEKLA 514
V + +LA
Sbjct: 703 STVQEAEELRRRELA 717
>At1g62380.1 68414.m07038 1-aminocyclopropane-1-carboxylate oxidase,
putative / ACC oxidase, putative nearly identical to ACC
oxidase (ACC ox1) GI:587086 from [Brassica oleracea]
Length = 320
Score = 28.3 bits (60), Expect = 4.4
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +1
Query: 118 DFFKDIEHHTKEFHKTL-EQQFNSLTKSKDAQDFSKAWKD 234
D IE TK+ +KT EQ+FN + KSK + +D
Sbjct: 47 DLMDKIEKMTKDHYKTCQEQKFNDMLKSKGLDNLETEVED 86
>At5g46070.1 68418.m05665 guanylate-binding family protein contains
Pfam domains PF02263: Guanylate-binding protein,
N-terminal domain and PF02841: Guanylate-binding
protein, C-terminal domain
Length = 1060
Score = 27.9 bits (59), Expect = 5.8
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Frame = +2
Query: 341 QNIERTAEELRKAHPDVEKNATALREKLQAA---VQNTVQE 454
+++E+ +E RKAH + A AL +LQAA V N QE
Sbjct: 876 KSLEKLLDEERKAHIAANRRAEALSLELQAAQAHVDNLQQE 916
>At5g20490.1 68418.m02435 myosin, putative similar to myosin
(GI:433663) [Arabidopsis thaliana]; myosin-like protein
my5, common sunflower, PIR:T14279
Length = 1545
Score = 27.9 bits (59), Expect = 5.8
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = +2
Query: 320 EALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQ 451
EAL+ S Q + AE LRKA + E + L +L+ A + Q
Sbjct: 997 EALKASLQAERQAAENLRKAFSEAEARNSELATELENATRKADQ 1040
>At3g58840.1 68416.m06558 expressed protein
Length = 318
Score = 27.9 bits (59), Expect = 5.8
Identities = 15/51 (29%), Positives = 23/51 (45%)
Frame = +2
Query: 311 KAXEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESXK 463
KA + + + E+ AE LRK +VEK L K+ ++E K
Sbjct: 128 KALAEIVEKLEGCEKEAEGLRKDRAEVEKRVRDLERKIGVLEVREMEEKSK 178
>At2g32240.1 68415.m03940 expressed protein contains Pfam profile:
PF04508 viral A-type inclusion protein repeat
Length = 775
Score = 27.5 bits (58), Expect = 7.7
Identities = 24/104 (23%), Positives = 43/104 (41%), Gaps = 3/104 (2%)
Frame = +2
Query: 323 ALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESXKLAXXVSSNVQXTN 502
ALE ++ E + D+ K T+ EKLQ+ + + +E+ + V++ Q T
Sbjct: 476 ALEAEKEQTANELEASKTTIEDLTKQLTSEGEKLQSQISSHTEENNQ----VNAMFQSTK 531
Query: 503 EKLAPKINAAYDDFAXNTQEVIXXXQEAANAKQ*A---SILNSH 625
E+L I + + + E + A S+L SH
Sbjct: 532 EELQSVIAKLEEQLTVESSKADTLVSEIEKLRAVAAEKSVLESH 575
>At2g06750.1 68415.m00753 hypothetical protein similar to At5g28270,
At2g12100, At2g05450, At1g45090, At2g16180
Length = 435
Score = 27.5 bits (58), Expect = 7.7
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -3
Query: 287 PWRLLAKALSCCSTDSEPSFQALLKSCASF 198
PW+ LA AL + SF L CASF
Sbjct: 133 PWKKLALALIIIVVEGRTSFLLTLDRCASF 162
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,367,709
Number of Sequences: 28952
Number of extensions: 154125
Number of successful extensions: 687
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 670
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 687
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1265787216
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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