Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_G07
         (653 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    22   3.8  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   6.7  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   8.9  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   8.9  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   8.9  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   8.9  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    21   8.9  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    21   8.9  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    21   8.9  

>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 11/36 (30%), Positives = 16/36 (44%)
 Frame = -3

Query: 441 FNDHTFGTPIXYCVVDKLVESSTNGKYSGNGMHDYK 334
           F  H     I +  V    +S+ NG+   N +H YK
Sbjct: 118 FGAHWMKESISFAKVKLTNKSNGNGQIMLNSLHKYK 153


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -1

Query: 260 YVISANSTVVDNNIPS 213
           YVI  N+ V+  NIPS
Sbjct: 133 YVIRGNTAVLKCNIPS 148


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -2

Query: 76  LLKNNQELLGCVLC 35
           L K  + ++GCVLC
Sbjct: 787 LQKATEHVIGCVLC 800


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -2

Query: 76  LLKNNQELLGCVLC 35
           L K  + ++GCVLC
Sbjct: 787 LQKATEHVIGCVLC 800


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -2

Query: 76  LLKNNQELLGCVLC 35
           L K  + ++GCVLC
Sbjct: 787 LQKATEHVIGCVLC 800


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -2

Query: 76  LLKNNQELLGCVLC 35
           L K  + ++GCVLC
Sbjct: 787 LQKATEHVIGCVLC 800


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +1

Query: 7   FKISDSAVKNIIHNLTTLG 63
           F+I +S  KNII +L  +G
Sbjct: 204 FRIEESEEKNIIVSLRQIG 222


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +1

Query: 4   FFKISDSAVKNIIHNLTTLGYFLIK 78
           FF I+ + +  II N+TT    +I+
Sbjct: 318 FFSINKTTLLQIIGNVTTFFIIIIQ 342


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +1

Query: 7   FKISDSAVKNIIHNLTTLG 63
           F+I +S  KNII +L  +G
Sbjct: 204 FRIEESEEKNIIVSLRQIG 222


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,886
Number of Sequences: 336
Number of extensions: 3242
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)