Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_G05
         (649 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_06_0327 - 33158131-33158315,33158586-33158639,33159149-331591...    33   0.15 
07_03_0329 + 16840051-16840917,16840999-16841342,16841444-168415...    32   0.34 
03_06_0243 + 32598782-32598793,32599037-32599123,32601052-326012...    32   0.34 
03_06_0476 + 34199577-34199638,34200267-34200397,34200535-342006...    29   2.4  

>03_06_0327 - 33158131-33158315,33158586-33158639,33159149-33159180,
            33159275-33159369,33159466-33159539,33159643-33159778,
            33159874-33159937,33160017-33160079,33160160-33160299,
            33160487-33160627,33160747-33160868,33160947-33161112,
            33161194-33161313,33161580-33161651,33161787-33161843,
            33162036-33162152,33162231-33162369,33162794-33162900,
            33162972-33163081,33163172-33163305,33163397-33163546,
            33163635-33163840,33166123-33166818
          Length = 1059

 Score = 33.5 bits (73), Expect = 0.15
 Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
 Frame = +3

Query: 390  QHGRCEPITIQFCQKLRYNQTIFPNILNQARQEDAAANMLLFTTLIKLNCSP-DLRFFLC 566
            + G   P+T    QK R++  +FP +  +    D + N+L  T + +  C P +  F+LC
Sbjct: 874  EEGYLPPVTFVVVQK-RHHTRLFPEVHGRRDMTDKSGNILPGTVVDRQICHPTEFDFYLC 932

Query: 567  S 569
            S
Sbjct: 933  S 933


>07_03_0329 + 16840051-16840917,16840999-16841342,16841444-16841574,
            16841671-16841792,16841877-16841983,16842104-16842236,
            16842342-16842458,16842560-16842667,16842716-16842742,
            16842759-16842830,16843462-16843584,16843671-16843833,
            16844140-16844264,16844355-16844489,16844574-16844677,
            16844772-16844834,16844930-16844993,16845186-16845318,
            16845414-16845487,16845603-16845697,16845799-16845830,
            16846201-16846355
          Length = 1097

 Score = 32.3 bits (70), Expect = 0.34
 Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
 Frame = +3

Query: 411  ITIQFCQKLRYNQTIFPNILNQARQEDAAANMLLFTTLIKLNCSP-DLRFFLCS 569
            IT    QK R++  +FPN  N  R  D   N+   T +  + C P +  FFLCS
Sbjct: 947  ITFIVVQK-RHHTRLFPNNYNDPRGMDGTGNVRPGTVVDTVICHPREFDFFLCS 999


>03_06_0243 +
           32598782-32598793,32599037-32599123,32601052-32601257,
           32601342-32601453,32601628-32601724,32601815-32601924,
           32601996-32602153,32602559-32602697,32602776-32602892,
           32603084-32603140,32603280-32603351,32603617-32603736,
           32603818-32603983,32604067-32604188,32604373-32604447,
           32604636-32604775,32604860-32604922,32605002-32605065,
           32605161-32605296,32605401-32605474,32605570-32605664,
           32605761-32605792,32606344-32606474,32606595-32606827,
           32606916-32607723,32607815-32607967
          Length = 1192

 Score = 32.3 bits (70), Expect = 0.34
 Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
 Frame = +3

Query: 390 QHGRCEPITIQFCQKLRYNQTIFPNILNQARQEDAAANMLLFTTLIKLNCSP-DLRFFLC 566
           + G   P+T    QK R++  +FP +  +    D + N+L  T   +  C P +  F+LC
Sbjct: 645 EEGYLPPVTFVVVQK-RHHTRLFPEVHGRRDMTDKSGNILPGTVKDRQICHPTEFYFYLC 703

Query: 567 S 569
           S
Sbjct: 704 S 704


>03_06_0476 +
           34199577-34199638,34200267-34200397,34200535-34200698,
           34201007-34201117,34201308-34201387,34201489-34201639,
           34201736-34201829,34202421-34202509,34203672-34203745,
           34203859-34204021,34204445-34204530,34205011-34205094,
           34205186-34205366,34205837-34205887
          Length = 506

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +2

Query: 134 HNMLISNKRHFKRDKYLHVTWVKIPQF 214
           HN++ S   HF  D  LH  WV++ QF
Sbjct: 158 HNVIESKPDHFLDDLRLHNPWVELKQF 184


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,640,746
Number of Sequences: 37544
Number of extensions: 253428
Number of successful extensions: 443
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 428
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 443
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1608522592
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)