Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_G05
(649 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81128-1|CAB03398.1| 568|Caenorhabditis elegans Hypothetical pr... 98 4e-21
AF013953-1|AAC47750.1| 568|Caenorhabditis elegans mom-5 protein. 98 4e-21
U43316-1|AAC46993.1| 525|Caenorhabditis elegans transmembrane r... 66 2e-11
DQ178242-1|ABA18181.1| 578|Caenorhabditis elegans Frizzled homo... 66 2e-11
AF016413-2|ABA54421.1| 578|Caenorhabditis elegans Caenorhabditi... 66 2e-11
AF016413-1|ABA54422.1| 550|Caenorhabditis elegans Caenorhabditi... 66 2e-11
AC006736-2|AAF60493.1| 529|Caenorhabditis elegans Abnormal cell... 66 2e-11
AC006736-1|AAF60492.1| 525|Caenorhabditis elegans Abnormal cell... 66 2e-11
AB026113-1|BAA84678.1| 550|Caenorhabditis elegans Cfz2 protein. 66 2e-11
U63557-1|AAC47301.1| 558|Caenorhabditis elegans transmembrane r... 66 3e-11
AC024201-2|AAK82924.1| 556|Caenorhabditis elegans Abnormal cell... 66 3e-11
AC024201-1|AAF36028.1| 558|Caenorhabditis elegans Abnormal cell... 66 3e-11
AC084197-27|AAG23467.2| 314|Caenorhabditis elegans Hypothetical... 56 3e-08
AC087081-12|AAK66039.2| 324|Caenorhabditis elegans Hypothetical... 28 5.0
Z77739-1|CAB01298.1| 46|Caenorhabditis elegans PP1-like Ser/Th... 27 8.7
>Z81128-1|CAB03398.1| 568|Caenorhabditis elegans Hypothetical
protein T23D8.1 protein.
Length = 568
Score = 98.3 bits (234), Expect = 4e-21
Identities = 47/114 (41%), Positives = 64/114 (56%)
Frame = +3
Query: 300 KHYVIIFSLLCLFALTKGSRXIVYQGDSLPQHGRCEPITIQFCQKLRYNQTIFPNILNQA 479
+H +I+F CL A + S + + +CE ITI C+ L YNQT+FPN+L
Sbjct: 3 RHILILFLFGCLSADQRLSSTSISSMNGFSTTRKCEHITIPMCKNLDYNQTVFPNLLGHT 62
Query: 480 RQEDAAANMLLFTTLIKLNCSPDLRFFLCSVYAPVCTILDSAIPPWSSFM*SCK 641
Q +A + F LIK+ CS D+R FLC+VYAPVCT+L+ I P S K
Sbjct: 63 TQSEAGPAIAQFNPLIKVKCSEDIRLFLCTVYAPVCTVLEKPIQPCRELCLSAK 116
>AF013953-1|AAC47750.1| 568|Caenorhabditis elegans mom-5 protein.
Length = 568
Score = 98.3 bits (234), Expect = 4e-21
Identities = 47/114 (41%), Positives = 64/114 (56%)
Frame = +3
Query: 300 KHYVIIFSLLCLFALTKGSRXIVYQGDSLPQHGRCEPITIQFCQKLRYNQTIFPNILNQA 479
+H +I+F CL A + S + + +CE ITI C+ L YNQT+FPN+L
Sbjct: 3 RHILILFLFGCLSADQRLSSTSISSMNGFSTTRKCEHITIPMCKNLDYNQTVFPNLLGHT 62
Query: 480 RQEDAAANMLLFTTLIKLNCSPDLRFFLCSVYAPVCTILDSAIPPWSSFM*SCK 641
Q +A + F LIK+ CS D+R FLC+VYAPVCT+L+ I P S K
Sbjct: 63 TQSEAGPAIAQFNPLIKVKCSEDIRLFLCTVYAPVCTVLEKPIQPCRELCLSAK 116
>U43316-1|AAC46993.1| 525|Caenorhabditis elegans transmembrane
receptor protein.
Length = 525
Score = 66.5 bits (155), Expect = 2e-11
Identities = 26/63 (41%), Positives = 42/63 (66%)
Frame = +3
Query: 399 RCEPITIQFCQKLRYNQTIFPNILNQARQEDAAANMLLFTTLIKLNCSPDLRFFLCSVYA 578
RC+ + + C L YN T FPN++++ +DA+ ++L + L+ + CS L+FFLCSVY
Sbjct: 25 RCQKVDHEMCNDLPYNLTSFPNLVDEESWKDASESILTYKPLLSVVCSEQLKFFLCSVYF 84
Query: 579 PVC 587
P+C
Sbjct: 85 PMC 87
>DQ178242-1|ABA18181.1| 578|Caenorhabditis elegans Frizzled homolog
protein.
Length = 578
Score = 66.5 bits (155), Expect = 2e-11
Identities = 26/63 (41%), Positives = 39/63 (61%)
Frame = +3
Query: 399 RCEPITIQFCQKLRYNQTIFPNILNQARQEDAAANMLLFTTLIKLNCSPDLRFFLCSVYA 578
+CE ITI C+ + YN T FPN +QE+A + F L+++ C L+FFLC++Y
Sbjct: 24 KCEQITIPLCKGIGYNMTSFPNSYGHEKQEEAGLEVHQFYPLVEVGCFQHLKFFLCTMYT 83
Query: 579 PVC 587
P+C
Sbjct: 84 PIC 86
>AF016413-2|ABA54421.1| 578|Caenorhabditis elegans Caenorhabditis
frizzled homologprotein 2, isoform a protein.
Length = 578
Score = 66.5 bits (155), Expect = 2e-11
Identities = 26/63 (41%), Positives = 39/63 (61%)
Frame = +3
Query: 399 RCEPITIQFCQKLRYNQTIFPNILNQARQEDAAANMLLFTTLIKLNCSPDLRFFLCSVYA 578
+CE ITI C+ + YN T FPN +QE+A + F L+++ C L+FFLC++Y
Sbjct: 24 KCEQITIPLCKGIGYNMTSFPNSYGHEKQEEAGLEVHQFYPLVEVGCFQHLKFFLCTMYT 83
Query: 579 PVC 587
P+C
Sbjct: 84 PIC 86
>AF016413-1|ABA54422.1| 550|Caenorhabditis elegans Caenorhabditis
frizzled homologprotein 2, isoform b protein.
Length = 550
Score = 66.5 bits (155), Expect = 2e-11
Identities = 26/63 (41%), Positives = 39/63 (61%)
Frame = +3
Query: 399 RCEPITIQFCQKLRYNQTIFPNILNQARQEDAAANMLLFTTLIKLNCSPDLRFFLCSVYA 578
+CE ITI C+ + YN T FPN +QE+A + F L+++ C L+FFLC++Y
Sbjct: 24 KCEQITIPLCKGIGYNMTSFPNSYGHEKQEEAGLEVHQFYPLVEVGCFQHLKFFLCTMYT 83
Query: 579 PVC 587
P+C
Sbjct: 84 PIC 86
>AC006736-2|AAF60493.1| 529|Caenorhabditis elegans Abnormal cell
migration protein1, isoform b protein.
Length = 529
Score = 66.5 bits (155), Expect = 2e-11
Identities = 26/63 (41%), Positives = 42/63 (66%)
Frame = +3
Query: 399 RCEPITIQFCQKLRYNQTIFPNILNQARQEDAAANMLLFTTLIKLNCSPDLRFFLCSVYA 578
RC+ + + C L YN T FPN++++ +DA+ ++L + L+ + CS L+FFLCSVY
Sbjct: 25 RCQKVDHEMCNDLPYNLTSFPNLVDEESWKDASESILTYKPLLSVVCSEQLKFFLCSVYF 84
Query: 579 PVC 587
P+C
Sbjct: 85 PMC 87
>AC006736-1|AAF60492.1| 525|Caenorhabditis elegans Abnormal cell
migration protein1, isoform a protein.
Length = 525
Score = 66.5 bits (155), Expect = 2e-11
Identities = 26/63 (41%), Positives = 42/63 (66%)
Frame = +3
Query: 399 RCEPITIQFCQKLRYNQTIFPNILNQARQEDAAANMLLFTTLIKLNCSPDLRFFLCSVYA 578
RC+ + + C L YN T FPN++++ +DA+ ++L + L+ + CS L+FFLCSVY
Sbjct: 25 RCQKVDHEMCNDLPYNLTSFPNLVDEESWKDASESILTYKPLLSVVCSEQLKFFLCSVYF 84
Query: 579 PVC 587
P+C
Sbjct: 85 PMC 87
>AB026113-1|BAA84678.1| 550|Caenorhabditis elegans Cfz2 protein.
Length = 550
Score = 66.5 bits (155), Expect = 2e-11
Identities = 26/63 (41%), Positives = 39/63 (61%)
Frame = +3
Query: 399 RCEPITIQFCQKLRYNQTIFPNILNQARQEDAAANMLLFTTLIKLNCSPDLRFFLCSVYA 578
+CE ITI C+ + YN T FPN +QE+A + F L+++ C L+FFLC++Y
Sbjct: 24 KCEQITIPLCKGIGYNMTSFPNSYGHEKQEEAGLEVHQFYPLVEVGCFQHLKFFLCTMYT 83
Query: 579 PVC 587
P+C
Sbjct: 84 PIC 86
>U63557-1|AAC47301.1| 558|Caenorhabditis elegans transmembrane
receptor LIN-17 protein.
Length = 558
Score = 65.7 bits (153), Expect = 3e-11
Identities = 28/66 (42%), Positives = 38/66 (57%)
Frame = +3
Query: 396 GRCEPITIQFCQKLRYNQTIFPNILNQARQEDAAANMLLFTTLIKLNCSPDLRFFLCSVY 575
G+C PI I+ C+ L YN T FPN + Q + F L+K C P + FF+CSV+
Sbjct: 26 GKCIPIDIELCKDLPYNYTYFPNTILHNDQHTLQTHTEHFKPLMKTKCHPHIHFFICSVF 85
Query: 576 APVCTI 593
AP+C I
Sbjct: 86 APMCPI 91
>AC024201-2|AAK82924.1| 556|Caenorhabditis elegans Abnormal cell
lineage protein 17,isoform b protein.
Length = 556
Score = 65.7 bits (153), Expect = 3e-11
Identities = 28/66 (42%), Positives = 38/66 (57%)
Frame = +3
Query: 396 GRCEPITIQFCQKLRYNQTIFPNILNQARQEDAAANMLLFTTLIKLNCSPDLRFFLCSVY 575
G+C PI I+ C+ L YN T FPN + Q + F L+K C P + FF+CSV+
Sbjct: 26 GKCIPIDIELCKDLPYNYTYFPNTILHNDQHTLQTHTEHFKPLMKTKCHPHIHFFICSVF 85
Query: 576 APVCTI 593
AP+C I
Sbjct: 86 APMCPI 91
>AC024201-1|AAF36028.1| 558|Caenorhabditis elegans Abnormal cell
lineage protein 17,isoform a protein.
Length = 558
Score = 65.7 bits (153), Expect = 3e-11
Identities = 28/66 (42%), Positives = 38/66 (57%)
Frame = +3
Query: 396 GRCEPITIQFCQKLRYNQTIFPNILNQARQEDAAANMLLFTTLIKLNCSPDLRFFLCSVY 575
G+C PI I+ C+ L YN T FPN + Q + F L+K C P + FF+CSV+
Sbjct: 26 GKCIPIDIELCKDLPYNYTYFPNTILHNDQHTLQTHTEHFKPLMKTKCHPHIHFFICSVF 85
Query: 576 APVCTI 593
AP+C I
Sbjct: 86 APMCPI 91
>AC084197-27|AAG23467.2| 314|Caenorhabditis elegans Hypothetical
protein Y73B6BL.21 protein.
Length = 314
Score = 55.6 bits (128), Expect = 3e-08
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = +3
Query: 408 PITIQFCQKLRYNQTIFPNILNQARQEDAAANMLLFTTLIKLNCSPDLRFFLCSVYAPVC 587
P + C + Y Q PNIL +A + +L++LNC PD + FLCS++APVC
Sbjct: 41 PSNLSICNGIEYTQMRLPNILEHETVSEAIHASKDWESLLRLNCHPDTQRFLCSLFAPVC 100
Query: 588 TI-LDSAIPPWSS 623
+ +D I P S
Sbjct: 101 LMQMDRLILPCKS 113
>AC087081-12|AAK66039.2| 324|Caenorhabditis elegans Hypothetical
protein Y82E9BL.17 protein.
Length = 324
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -1
Query: 271 SLPHKCYSSQNISYSVILLKLW 206
S PHKCY+++N+ +LLK W
Sbjct: 138 SAPHKCYTNKNLK---LLLKTW 156
>Z77739-1|CAB01298.1| 46|Caenorhabditis elegans PP1-like Ser/Thr
protein phosphataseprotein.
Length = 46
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +3
Query: 405 EPITIQFCQKLRYNQTIFPNILNQARQEDAAANMLLFTTLIKLN 536
E + + FC K+RY IF L + E + N + F ++ N
Sbjct: 5 EVVVLLFCLKIRYRDRIF---LLRGNHETPSVNKVYFKCIVSFN 45
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,834,226
Number of Sequences: 27780
Number of extensions: 267828
Number of successful extensions: 566
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 552
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 566
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -