Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_G05
         (649 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    23   1.9  
DQ026036-1|AAY87895.1|  529|Apis mellifera nicotinic acetylcholi...    23   2.5  
DQ026035-1|AAY87894.1|  529|Apis mellifera nicotinic acetylcholi...    23   2.5  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    23   3.4  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           22   5.9  
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    22   5.9  
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         21   7.8  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    21   7.8  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    21   7.8  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    21   7.8  

>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 14/48 (29%), Positives = 22/48 (45%)
 Frame = +3

Query: 471 NQARQEDAAANMLLFTTLIKLNCSPDLRFFLCSVYAPVCTILDSAIPP 614
           + A++E  A   L     + L C   L FF C++   +CT L +   P
Sbjct: 609 SSAKKERKATKTLAIVLGVFLICW--LPFFTCNIMDAICTKLTADCQP 654


>DQ026036-1|AAY87895.1|  529|Apis mellifera nicotinic acetylcholine
           receptor alpha6subunit protein.
          Length = 529

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = +2

Query: 110 YYVLIKVCHNMLISNKRHFKRDKYLHVTWVKI 205
           + V   V   +L+ N  H   D+Y+  +W+K+
Sbjct: 334 FMVASSVVLTVLVLNFHHRTPDRYVMPSWIKM 365


>DQ026035-1|AAY87894.1|  529|Apis mellifera nicotinic acetylcholine
           receptor alpha6subunit protein.
          Length = 529

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = +2

Query: 110 YYVLIKVCHNMLISNKRHFKRDKYLHVTWVKI 205
           + V   V   +L+ N  H   D+Y+  +W+K+
Sbjct: 334 FMVASSVVLTVLVLNFHHRTPDRYVMPSWIKM 365


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -2

Query: 468 KYSEKWFDYNAISDK 424
           KY  K+FDYN  SD+
Sbjct: 35  KYQWKYFDYNFGSDE 49


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 8/18 (44%), Positives = 14/18 (77%)
 Frame = +3

Query: 18  SSYRNYFVNFSLISNKKT 71
           SS+R + V+ S++ +KKT
Sbjct: 397 SSFREFAVSTSILGDKKT 414


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = -1

Query: 55  ISEKFTK*LRYEENM 11
           ISEKF K +R E+N+
Sbjct: 611 ISEKFRKLIRIEDNV 625


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = +3

Query: 315 IFSLLCLFALTKGSRXIVYQGDSL 386
           +F L+CL  + +G+   + +G+SL
Sbjct: 4   LFMLVCLGIVCQGTTGNILRGESL 27


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = +3

Query: 315 IFSLLCLFALTKGSRXIVYQGDSL 386
           +F L+CL  + +G+   + +G+SL
Sbjct: 4   LFMLVCLGIVCQGTTGNILRGESL 27


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = +3

Query: 315 IFSLLCLFALTKGSRXIVYQGDSL 386
           +F L+CL  + +G+   + +G+SL
Sbjct: 4   LFMLVCLGIVCQGTTGNILRGESL 27


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = +3

Query: 516 TTLIKLNCSPDLRFFLCSVYAPVCTILD 599
           T LIKLN  P      C +YA  C  L+
Sbjct: 46  TPLIKLNNIPKSYGIKCEIYAK-CEFLN 72


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,039
Number of Sequences: 438
Number of extensions: 3145
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19560480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)