Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_G01
(648 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_01_0100 + 1034057-1034308,1034962-1035078,1035152-1035382,103... 37 0.016
08_01_0793 - 7685702-7686955 33 0.20
06_01_0293 - 2139421-2139600,2139716-2140471,2140830-2140935,214... 32 0.34
04_03_0187 + 12436934-12437108,12438020-12439044 32 0.34
11_06_0710 - 26492093-26493460 32 0.45
08_02_1592 + 28078055-28078966 31 0.79
05_02_0048 - 6066921-6067541 31 1.0
07_01_0463 + 3502708-3503535 30 1.4
12_02_1166 + 26643045-26644078,26644238-26644322,26646800-26646937 30 1.8
09_04_0087 + 14476539-14476675,14478876-14479635,14479720-144798... 30 1.8
01_05_0420 + 21969797-21970939,21971307-21971369,21971488-219716... 29 2.4
12_02_1167 + 26647293-26648356,26648493-26648577,26649129-266491... 29 3.2
01_03_0263 + 14397549-14412911,14413023-14413787,14413950-14414132 28 5.6
02_01_0348 - 2506007-2506909,2507003-2508120,2508230-2508883,250... 28 7.4
>04_01_0100 +
1034057-1034308,1034962-1035078,1035152-1035382,
1038200-1038455,1038551-1038807,1038978-1039250,
1039617-1039898,1040045-1040165,1040351-1040520,
1040613-1040711
Length = 685
Score = 36.7 bits (81), Expect = 0.016
Identities = 22/87 (25%), Positives = 43/87 (49%), Gaps = 7/87 (8%)
Frame = +3
Query: 399 FKKTKIEITEDKNDSKTKKRG----QNKSRPKIFKDGKESKPCPTILDVE--SSEQLKIC 560
F + + T K++ K G + KS+ ++ ++ K+ + + L +E S + C
Sbjct: 46 FLRPPLSATPPKDEGKANGGGAVVAEKKSKRQLKRERKQEQKSSSHLCIEVGKSGNVSSC 105
Query: 561 QY-NNCKFIHDSKQFLNSKPKDIGXQC 638
+Y ++C+F HD +L KP D+ C
Sbjct: 106 KYGDSCRFSHDIDAYLAQKPADLEGTC 132
>08_01_0793 - 7685702-7686955
Length = 417
Score = 33.1 bits (72), Expect = 0.20
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Frame = +3
Query: 285 IKDEYVLQKSNIIEEKSYNLEKRKLXESSASFDDNNLEFKKTKIEITEDKNDSKTKK-RG 461
+KD+ Q+ I+EE S N ++ K+ ES A +N E TE++ K K+ G
Sbjct: 268 LKDQPKWQR--ILEEDSKN-KRTKISESGAYTSSSNQE--------TEEETSRKEKRPEG 316
Query: 462 QNKSRPKIFKDGKESKPCPTILDVESSE 545
Q K++ K+ GK KP P+ L + S+
Sbjct: 317 QKKAKAKL--KGKGKKPAPSPLGDQPSQ 342
>06_01_0293 -
2139421-2139600,2139716-2140471,2140830-2140935,
2140999-2141249,2141342-2141443,2141557-2141876,
2142350-2142546,2143668-2143786,2143876-2143997,
2144877-2145081
Length = 785
Score = 32.3 bits (70), Expect = 0.34
Identities = 21/80 (26%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Frame = +3
Query: 252 NMKNSNAGVCAIKDEYVLQKSNIIEEKSYNL-EKRKLXESSASFDDNNLEFKKTKIEITE 428
N K G+ I+DE L+++ + EEK L K++ E + ++ L + + E T+
Sbjct: 353 NQKLHKLGIQDIEDEIKLKETELTEEKVRRLIRKKEREEQEVARREDQLRNENAESEATK 412
Query: 429 DKNDSKTKKRGQNKSRPKIF 488
N + ++ +NK+ +IF
Sbjct: 413 QSNGN--QEGDENKTGERIF 430
>04_03_0187 + 12436934-12437108,12438020-12439044
Length = 399
Score = 32.3 bits (70), Expect = 0.34
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Frame = +3
Query: 318 IIEEKSYNLEKRKLXESSASFDDNNLEFKKTKIEITEDKNDSKTKK-RGQNKSRPKIFKD 494
I+EE S N ++ K+ ES A +N E TE++ K K+ GQ K++ K+
Sbjct: 259 ILEEDSKN-KRTKISESGAYTSSSNQE--------TEEETSRKEKRPEGQKKAKAKL--K 307
Query: 495 GKESKPCPTILDVESSE 545
GK KP P+ L + S+
Sbjct: 308 GKGKKPAPSPLGDQPSQ 324
>11_06_0710 - 26492093-26493460
Length = 455
Score = 31.9 bits (69), Expect = 0.45
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Frame = +3
Query: 327 EKSYNLEKRKLXESSASFDDNNLEFK-KTKIEITEDKNDSKTKKRGQNKSRPKIFKDGKE 503
EK +K+K S+ DD++ E K K K + ++D D K K + + K+ D K+
Sbjct: 134 EKKKKKKKKKSKSKSSDDDDDDAEKKSKKKSKNSDDDEDDKKKSKKKPKNPDDDEDDKKK 193
Query: 504 SKPCPTILDVESSEQLK 554
SK + D + +++ K
Sbjct: 194 SKKKSSDEDNDGAKKKK 210
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/56 (28%), Positives = 32/56 (57%)
Frame = +3
Query: 345 EKRKLXESSASFDDNNLEFKKTKIEITEDKNDSKTKKRGQNKSRPKIFKDGKESKP 512
+K+K + + DD+ + KK+K + +++ ND KK+ + KS+ K + + KP
Sbjct: 173 DKKKSKKKPKNPDDDEDDKKKSKKKSSDEDNDGAKKKK-KKKSKGKSSDEEDDEKP 227
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/62 (29%), Positives = 33/62 (53%)
Frame = +3
Query: 324 EEKSYNLEKRKLXESSASFDDNNLEFKKTKIEITEDKNDSKTKKRGQNKSRPKIFKDGKE 503
E + +K+K +S +S DD++ KK+K + +D KK+ +K +PK D ++
Sbjct: 132 ESEKKKKKKKKKSKSKSSDDDDDDAEKKSKKKSKNSDDDEDDKKK--SKKKPKNPDDDED 189
Query: 504 SK 509
K
Sbjct: 190 DK 191
>08_02_1592 + 28078055-28078966
Length = 303
Score = 31.1 bits (67), Expect = 0.79
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Frame = +3
Query: 318 IIEEKSYNLEKRKLXESSASFDDNNLEFKKTKIEITEDKNDSKTKK-RGQNKSRPKIFKD 494
I+EE S N ++ K+ ES A +N E TE++ K K+ GQ K++ K+
Sbjct: 163 ILEEDSKN-KRTKISESGAYTSSSNQE--------TEEETSRKEKRPEGQKKAKVKLKGK 213
Query: 495 GKESKPCP 518
GK+ P P
Sbjct: 214 GKKHAPSP 221
>05_02_0048 - 6066921-6067541
Length = 206
Score = 30.7 bits (66), Expect = 1.0
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +3
Query: 444 KTKKRGQNKSRPKIFKDGKESKP 512
K K+RG+ K RPK K G ++KP
Sbjct: 10 KRKRRGEGKPRPKATKGGSKAKP 32
>07_01_0463 + 3502708-3503535
Length = 275
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/55 (29%), Positives = 26/55 (47%)
Frame = +3
Query: 345 EKRKLXESSASFDDNNLEFKKTKIEITEDKNDSKTKKRGQNKSRPKIFKDGKESK 509
E +K + DD + E KK + E+ E K D KK K + ++GK+ +
Sbjct: 84 ENKKSDKKDDEHDDEDEEGKKKEKEMKEKKKDKSDKKEEGKKKKDGDEEEGKKKE 138
>12_02_1166 + 26643045-26644078,26644238-26644322,26646800-26646937
Length = 418
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/65 (27%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +3
Query: 363 ESSASFDDNNLEFKKTKIEITEDKNDSKTKKRGQNKSRPK-IFKDGKESKPCPTILDVES 539
E++A+ +D+++E K +E+K + +KRG+ + R + K K+ T L
Sbjct: 128 EAAAAEEDDDVEHKVAVRTTSEEKKKKRRRKRGRGRVRGHGVAKRPKKEDEEGTKLSAPK 187
Query: 540 SEQLK 554
+EQL+
Sbjct: 188 AEQLE 192
>09_04_0087 + 14476539-14476675,14478876-14479635,14479720-14479871,
14479958-14480024,14480632-14480831,14480915-14481068,
14481585-14481669,14481766-14481857,14482575-14482766,
14482867-14482992,14483072-14483125,14483494-14483550,
14484509-14484606,14484703-14485038,14485116-14485203,
14486891-14487016,14487082-14487138,14488054-14488133,
14488228-14488270,14488948-14489034,14489331-14489420,
14489996-14490054,14490141-14490231,14490330-14490495,
14490662-14490755,14491787-14492909
Length = 1537
Score = 29.9 bits (64), Expect = 1.8
Identities = 23/92 (25%), Positives = 39/92 (42%)
Frame = +3
Query: 348 KRKLXESSASFDDNNLEFKKTKIEITEDKNDSKTKKRGQNKSRPKIFKDGKESKPCPTIL 527
+ +L S S+D N +E E K D K KKR ++K + + K K +
Sbjct: 1404 RSQLEVVSTSYDGNQAPDSMNGLETKEKKKDKKDKKRHRDKKDDPEYLEKKRLKKEKKRM 1463
Query: 528 DVESSEQLKICQYNNCKFIHDSKQFLNSKPKD 623
+ E ++ K + + S+Q +KP D
Sbjct: 1464 EKEKGKKQK-----EGEGVSSSEQKNTAKPSD 1490
>01_05_0420 +
21969797-21970939,21971307-21971369,21971488-21971616,
21972241-21972291,21972669-21972809,21972922-21973122,
21973201-21973419,21973582-21973700,21973772-21973862,
21975864-21975965,21976291-21976315,21976522-21976592
Length = 784
Score = 29.5 bits (63), Expect = 2.4
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 10/89 (11%)
Frame = +3
Query: 381 DDNNLEFKKT-KIEITEDKNDSKTKKRGQNKSRPKIFKDGKESKPCPTILDVESSEQLKI 557
DD L+ T K +TE++ KTK + ++ + + K K P I + +K+
Sbjct: 379 DDKALKHGNTRKRTLTEERKAKKTKTKRIKRALQREAEGVKRLKLQPVI----KPKVVKV 434
Query: 558 CQY---------NNCKFIHDSKQFLNSKP 617
C + N CKF HD+ SKP
Sbjct: 435 CHFYLHGKCQQGNLCKFSHDTTPLTKSKP 463
>12_02_1167 +
26647293-26648356,26648493-26648577,26649129-26649191,
26649381-26649443,26649987-26650070,26650229-26650783
Length = 637
Score = 29.1 bits (62), Expect = 3.2
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Frame = +3
Query: 345 EKRKLXESSASFDDNNLEFKKTKIEITEDKNDSKTKKRGQNK--SRPKIFKDGKESKPCP 518
E K ++A DD+N+E K +E+K + +KRG+ + + KE +
Sbjct: 132 ESPKEEAAAAEEDDDNVEHKVAVPTTSEEKKRRRRRKRGRGRVGGHGVAKRPKKEEEEEE 191
Query: 519 TILDVESSEQLK 554
T L +EQL+
Sbjct: 192 TKLSAPKAEQLE 203
>01_03_0263 + 14397549-14412911,14413023-14413787,14413950-14414132
Length = 5436
Score = 28.3 bits (60), Expect = 5.6
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 9/95 (9%)
Frame = +3
Query: 300 VLQKSNIIEEKSYNLEKRKLXESSASFDDNNL-----EFKKTKIEITEDKNDSKTKKRGQ 464
V + +IE+K+Y + ++ S + NL E K+ +I + +DK++ K+ Q
Sbjct: 326 VFEDHGMIEDKTYIVPQKYFEPEKFSIEFKNLNGEVEEDKQKEILVLQDKSNMMQDKKDQ 385
Query: 465 NKSRPKIFKDGKESKPCP----TILDVESSEQLKI 557
N G+E L+VE SE LK+
Sbjct: 386 NNLEQTNSNGGEEELQVKDKDLVALEVEESE-LKV 419
>02_01_0348 -
2506007-2506909,2507003-2508120,2508230-2508883,
2508920-2509046
Length = 933
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/55 (25%), Positives = 29/55 (52%)
Frame = +3
Query: 342 LEKRKLXESSASFDDNNLEFKKTKIEITEDKNDSKTKKRGQNKSRPKIFKDGKES 506
L+K+K + S+S DD+++E + EI E+ + + ++ G ++ D S
Sbjct: 318 LKKKKSVKPSSSDDDDDVEVEDVDEEIGEENAEEEEEEEGADEEENDSSDDSDSS 372
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,444,518
Number of Sequences: 37544
Number of extensions: 197393
Number of successful extensions: 689
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 656
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 686
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1608522592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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