Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_G01
(648 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC009973-1|AAH09973.1| 650|Homo sapiens dihydrouridine synthase... 46 1e-04
BC008362-1|AAH08362.1| 613|Homo sapiens DUS3L protein protein. 46 1e-04
AL365411-1|CAB96955.1| 465|Homo sapiens hypothetical protein, s... 46 1e-04
AK023958-1|BAB14740.1| 650|Homo sapiens protein ( Homo sapiens ... 46 2e-04
Z22780-1|CAA80457.1| 598|Homo sapiens cylicin protein. 33 0.88
BC126461-1|AAI26462.1| 651|Homo sapiens cylicin, basic protein ... 33 0.88
BC070355-1|AAH70355.1| 433|Homo sapiens CYLC1 protein protein. 33 0.88
BC038787-1|AAH38787.1| 563|Homo sapiens CYLC1 protein protein. 33 0.88
AL627233-1|CAI40037.1| 651|Homo sapiens cylicin, basic protein ... 33 0.88
BC111693-1|AAI11694.1| 739|Homo sapiens PPIG protein protein. 32 1.5
X99717-1|CAA68053.1| 754|Homo sapiens SRcyp protein protein. 31 3.5
U40763-1|AAB40347.1| 754|Homo sapiens CARS-Cyp protein. 31 3.5
AC016772-2|AAY24233.1| 571|Homo sapiens unknown protein. 31 3.5
Z81367-2|CAI42027.1| 409|Homo sapiens nuclear RNA export factor... 31 4.7
Z81367-1|CAI42026.1| 626|Homo sapiens nuclear RNA export factor... 31 4.7
BC131708-1|AAI31709.1| 365|Homo sapiens NXF5 protein protein. 31 4.7
BC015020-1|AAH15020.1| 626|Homo sapiens nuclear RNA export fact... 31 4.7
AL672207-5|CAI42478.1| 302|Homo sapiens nuclear RNA export fact... 31 4.7
AL672207-4|CAI42477.1| 368|Homo sapiens nuclear RNA export fact... 31 4.7
AL672207-3|CAI42476.1| 305|Homo sapiens nuclear RNA export fact... 31 4.7
AL672207-2|CAI42475.1| 397|Homo sapiens nuclear RNA export fact... 31 4.7
AL590069-2|CAD13494.1| 626|Homo sapiens nuclear RNA export fact... 31 4.7
AL590069-1|CAI40394.1| 409|Homo sapiens nuclear RNA export fact... 31 4.7
AL157436-1|CAB75659.1| 409|Homo sapiens hypothetical protein pr... 31 4.7
AK000423-1|BAA91154.1| 515|Homo sapiens protein ( Homo sapiens ... 31 4.7
AJ277659-1|CAC20433.1| 626|Homo sapiens nuclear RNA export fact... 31 4.7
AJ277658-1|CAC20432.1| 302|Homo sapiens nuclear RNA export fact... 31 4.7
AJ277657-1|CAC20431.1| 305|Homo sapiens nuclear RNA export fact... 31 4.7
AJ277655-1|CAC20429.1| 368|Homo sapiens nuclear RNA export fact... 31 4.7
AJ277654-1|CAC20428.1| 397|Homo sapiens nuclear RNA export fact... 31 4.7
AJ277526-1|CAC16588.1| 626|Homo sapiens nuclear RNA export fact... 31 4.7
AF285596-1|AAK31975.1| 560|Homo sapiens nuclear export factor 2... 31 4.7
D87440-1|BAA13382.2| 702|Homo sapiens KIAA0252 protein. 30 6.2
BC015052-1|AAH15052.1| 585|Homo sapiens Rtf1, Paf1/RNA polymera... 30 6.2
>BC009973-1|AAH09973.1| 650|Homo sapiens dihydrouridine synthase
3-like (S. cerevisiae) protein.
Length = 650
Score = 46.0 bits (104), Expect = 1e-04
Identities = 24/81 (29%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Frame = +3
Query: 417 EITEDKNDSKTKKR--GQNKSRPKIFKDGKE-SKPCPTILDVESSEQLKICQYNN-CKFI 584
E E +T+KR GQNK RP + + ++ CP+++ +++ C + + C+F+
Sbjct: 89 EAAEPGEQLQTQKRARGQNKGRPHVKPTNYDKNRLCPSLIQESAAK----CFFGDRCRFL 144
Query: 585 HDSKQFLNSKPKDIGXQCHVY 647
HD ++L +KP D+G +C ++
Sbjct: 145 HDVGRYLETKPADLGPRCVLF 165
>BC008362-1|AAH08362.1| 613|Homo sapiens DUS3L protein protein.
Length = 613
Score = 46.0 bits (104), Expect = 1e-04
Identities = 24/81 (29%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Frame = +3
Query: 417 EITEDKNDSKTKKR--GQNKSRPKIFKDGKE-SKPCPTILDVESSEQLKICQYNN-CKFI 584
E E +T+KR GQNK RP + + ++ CP+++ +++ C + + C+F+
Sbjct: 52 EAAEPGEQLQTQKRARGQNKGRPHVKPTNYDKNRLCPSLIQESAAK----CFFGDRCRFL 107
Query: 585 HDSKQFLNSKPKDIGXQCHVY 647
HD ++L +KP D+G +C ++
Sbjct: 108 HDVGRYLETKPADLGPRCVLF 128
>AL365411-1|CAB96955.1| 465|Homo sapiens hypothetical protein,
similar to (AF091072.1) predicted protein [Homo sapiens]
protein.
Length = 465
Score = 46.0 bits (104), Expect = 1e-04
Identities = 24/81 (29%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Frame = +3
Query: 417 EITEDKNDSKTKKR--GQNKSRPKIFKDGKE-SKPCPTILDVESSEQLKICQYNN-CKFI 584
E E +T+KR GQNK RP + + ++ CP+++ +++ C + + C+F+
Sbjct: 72 EAAEPGEQLQTQKRARGQNKGRPHVKPTNYDKNRLCPSLIQESAAK----CFFGDRCRFL 127
Query: 585 HDSKQFLNSKPKDIGXQCHVY 647
HD ++L +KP D+G +C ++
Sbjct: 128 HDVGRYLETKPADLGPRCVLF 148
>AK023958-1|BAB14740.1| 650|Homo sapiens protein ( Homo sapiens
cDNA FLJ13896 fis, clone THYRO1001703, weakly similar to
NIFR3-LIKE PROTEIN. ).
Length = 650
Score = 45.6 bits (103), Expect = 2e-04
Identities = 24/81 (29%), Positives = 46/81 (56%), Gaps = 4/81 (4%)
Frame = +3
Query: 417 EITEDKNDSKTKKR--GQNKSRPKIFKDGKE-SKPCPTILDVESSEQLKICQYNN-CKFI 584
E E +T+KR GQNK RP + + ++ CP+++ ++ C + + C+F+
Sbjct: 89 EAAEPGEQLQTQKRARGQNKGRPHVKPTNYDKNRLCPSLIQESAAN----CFFGDRCRFL 144
Query: 585 HDSKQFLNSKPKDIGXQCHVY 647
HD ++L +KP D+G +C ++
Sbjct: 145 HDVGRYLETKPADLGPRCVLF 165
>Z22780-1|CAA80457.1| 598|Homo sapiens cylicin protein.
Length = 598
Score = 33.1 bits (72), Expect = 0.88
Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 3/83 (3%)
Frame = +3
Query: 306 QKSNIIEEKSYNLEK-RKLXESSASFDDNNLEFKKTKIEITEDKNDSKTKKRGQNKSRPK 482
+ S+ E S + +K K + + DD + KK + DSK +++ K + K
Sbjct: 241 KSSDAESEDSKDAKKDSKKVKKNVKKDDKKKDVKKDTESTDAESGDSKDERKDTKKDKKK 300
Query: 483 IFKDG--KESKPCPTILDVESSE 545
+ KD K++K P D ES +
Sbjct: 301 LKKDDKKKDTKKYPESTDTESGD 323
>BC126461-1|AAI26462.1| 651|Homo sapiens cylicin, basic protein of
sperm head cytoskeleton 1 protein.
Length = 651
Score = 33.1 bits (72), Expect = 0.88
Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 3/83 (3%)
Frame = +3
Query: 306 QKSNIIEEKSYNLEK-RKLXESSASFDDNNLEFKKTKIEITEDKNDSKTKKRGQNKSRPK 482
+ S+ E S + +K K + + DD + KK + DSK +++ K + K
Sbjct: 294 KSSDAESEDSKDAKKDSKKVKKNVKKDDKKKDVKKDTESTDAESGDSKDERKDTKKDKKK 353
Query: 483 IFKDG--KESKPCPTILDVESSE 545
+ KD K++K P D ES +
Sbjct: 354 LKKDDKKKDTKKYPESTDTESGD 376
>BC070355-1|AAH70355.1| 433|Homo sapiens CYLC1 protein protein.
Length = 433
Score = 33.1 bits (72), Expect = 0.88
Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 3/83 (3%)
Frame = +3
Query: 306 QKSNIIEEKSYNLEK-RKLXESSASFDDNNLEFKKTKIEITEDKNDSKTKKRGQNKSRPK 482
+ S+ E S + +K K + + DD + KK + DSK +++ K + K
Sbjct: 293 KSSDAESEDSKDAKKDSKKVKKNVKKDDKKKDVKKDTESTDAESGDSKDERKDTKKDKKK 352
Query: 483 IFKDG--KESKPCPTILDVESSE 545
+ KD K++K P D ES +
Sbjct: 353 LKKDDKKKDTKKYPESTDTESGD 375
>BC038787-1|AAH38787.1| 563|Homo sapiens CYLC1 protein protein.
Length = 563
Score = 33.1 bits (72), Expect = 0.88
Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 3/83 (3%)
Frame = +3
Query: 306 QKSNIIEEKSYNLEK-RKLXESSASFDDNNLEFKKTKIEITEDKNDSKTKKRGQNKSRPK 482
+ S+ E S + +K K + + DD + KK + DSK +++ K + K
Sbjct: 200 KSSDAESEDSKDAKKDSKKVKKNVKKDDKKKDVKKDTESTDAESGDSKDERKDTKKDKKK 259
Query: 483 IFKDG--KESKPCPTILDVESSE 545
+ KD K++K P D ES +
Sbjct: 260 LKKDDKKKDTKKYPESTDTESGD 282
>AL627233-1|CAI40037.1| 651|Homo sapiens cylicin, basic protein of
sperm head cytoskeleton protein.
Length = 651
Score = 33.1 bits (72), Expect = 0.88
Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 3/83 (3%)
Frame = +3
Query: 306 QKSNIIEEKSYNLEK-RKLXESSASFDDNNLEFKKTKIEITEDKNDSKTKKRGQNKSRPK 482
+ S+ E S + +K K + + DD + KK + DSK +++ K + K
Sbjct: 294 KSSDAESEDSKDAKKDSKKVKKNVKKDDKKKDVKKDTESTDAESGDSKDERKDTKKDKKK 353
Query: 483 IFKDG--KESKPCPTILDVESSE 545
+ KD K++K P D ES +
Sbjct: 354 LKKDDKKKDTKKYPESTDTESGD 376
>BC111693-1|AAI11694.1| 739|Homo sapiens PPIG protein protein.
Length = 739
Score = 32.3 bits (70), Expect = 1.5
Identities = 24/85 (28%), Positives = 39/85 (45%)
Frame = +3
Query: 255 MKNSNAGVCAIKDEYVLQKSNIIEEKSYNLEKRKLXESSASFDDNNLEFKKTKIEITEDK 434
+K + +K+ + N+ E + EK K + S N+ E + EDK
Sbjct: 376 IKENQRSPVRVKERKITDHRNVSESPNRKNEKEKKVKDHKS---NSKERDIRRNSEKEDK 432
Query: 435 NDSKTKKRGQNKSRPKIFKDGKESK 509
+K KKR ++KSR K K+ +SK
Sbjct: 433 YKNKVKKRAKSKSRSK-SKEKSKSK 456
>X99717-1|CAA68053.1| 754|Homo sapiens SRcyp protein protein.
Length = 754
Score = 31.1 bits (67), Expect = 3.5
Identities = 23/85 (27%), Positives = 39/85 (45%)
Frame = +3
Query: 255 MKNSNAGVCAIKDEYVLQKSNIIEEKSYNLEKRKLXESSASFDDNNLEFKKTKIEITEDK 434
+K + +K+ + N+ E + EK K + S N+ E + +DK
Sbjct: 391 IKENQRSPVRVKERKITDHRNVSESPNRKNEKEKKVKDHKS---NSKERDIRRNSEKDDK 447
Query: 435 NDSKTKKRGQNKSRPKIFKDGKESK 509
+K KKR ++KSR K K+ +SK
Sbjct: 448 YKNKVKKRAKSKSRSK-SKEKSKSK 471
>U40763-1|AAB40347.1| 754|Homo sapiens CARS-Cyp protein.
Length = 754
Score = 31.1 bits (67), Expect = 3.5
Identities = 23/85 (27%), Positives = 39/85 (45%)
Frame = +3
Query: 255 MKNSNAGVCAIKDEYVLQKSNIIEEKSYNLEKRKLXESSASFDDNNLEFKKTKIEITEDK 434
+K + +K+ + N+ E + EK K + S N+ E + +DK
Sbjct: 391 IKENQRSPVRVKERKITDHRNVSESPNRKNEKEKKVKDHKS---NSKERDIRRNSEKDDK 447
Query: 435 NDSKTKKRGQNKSRPKIFKDGKESK 509
+K KKR ++KSR K K+ +SK
Sbjct: 448 YKNKVKKRAKSKSRSK-SKEKSKSK 471
>AC016772-2|AAY24233.1| 571|Homo sapiens unknown protein.
Length = 571
Score = 31.1 bits (67), Expect = 3.5
Identities = 23/85 (27%), Positives = 39/85 (45%)
Frame = +3
Query: 255 MKNSNAGVCAIKDEYVLQKSNIIEEKSYNLEKRKLXESSASFDDNNLEFKKTKIEITEDK 434
+K + +K+ + N+ E + EK K + S N+ E + +DK
Sbjct: 208 IKENQRSPVRVKERKITDHRNVSESPNRKNEKEKKVKDHKS---NSKERDIRRNSEKDDK 264
Query: 435 NDSKTKKRGQNKSRPKIFKDGKESK 509
+K KKR ++KSR K K+ +SK
Sbjct: 265 YKNKVKKRAKSKSRSK-SKEKSKSK 288
>Z81367-2|CAI42027.1| 409|Homo sapiens nuclear RNA export factor 2
protein.
Length = 409
Score = 30.7 bits (66), Expect = 4.7
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 4/84 (4%)
Frame = +3
Query: 330 KSYNLEKRKLXESSASFDDNNLEFKKTKIE---ITEDKNDSKTKKRGQNKSRPKIFK-DG 497
K+ NL K KL + L+ ++ +E + +D PK+ + DG
Sbjct: 211 KTLNLSKNKLESAWELGKVKGLKLEELWLEGNPLCSTFSDQSAYVSAIRDCFPKLLRLDG 270
Query: 498 KESKPCPTILDVESSEQLKICQYN 569
+E P I+D++SSE +K C+ N
Sbjct: 271 RELS-APVIVDIDSSETMKPCKEN 293
>Z81367-1|CAI42026.1| 626|Homo sapiens nuclear RNA export factor 2
protein.
Length = 626
Score = 30.7 bits (66), Expect = 4.7
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 4/84 (4%)
Frame = +3
Query: 330 KSYNLEKRKLXESSASFDDNNLEFKKTKIE---ITEDKNDSKTKKRGQNKSRPKIFK-DG 497
K+ NL K KL + L+ ++ +E + +D PK+ + DG
Sbjct: 299 KTLNLSKNKLESAWELGKVKGLKLEELWLEGNPLCSTFSDQSAYVSAIRDCFPKLLRLDG 358
Query: 498 KESKPCPTILDVESSEQLKICQYN 569
+E P I+D++SSE +K C+ N
Sbjct: 359 RELS-APVIVDIDSSETMKPCKEN 381
>BC131708-1|AAI31709.1| 365|Homo sapiens NXF5 protein protein.
Length = 365
Score = 30.7 bits (66), Expect = 4.7
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 4/84 (4%)
Frame = +3
Query: 330 KSYNLEKRKLXESSASFDDNNLEFKKTKIE---ITEDKNDSKTKKRGQNKSRPKIFK-DG 497
K+ NL K KL + L+ ++ +E + +D PK+ + DG
Sbjct: 188 KTLNLSKNKLESAWELGKVKGLKLEELWLEGNPLCSTFSDQSAYVSAIRDCFPKLLRLDG 247
Query: 498 KESKPCPTILDVESSEQLKICQYN 569
+E P I+D++SSE +K C+ N
Sbjct: 248 RELS-APVIVDIDSSETMKPCKEN 270
>BC015020-1|AAH15020.1| 626|Homo sapiens nuclear RNA export factor
2 protein.
Length = 626
Score = 30.7 bits (66), Expect = 4.7
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 4/84 (4%)
Frame = +3
Query: 330 KSYNLEKRKLXESSASFDDNNLEFKKTKIE---ITEDKNDSKTKKRGQNKSRPKIFK-DG 497
K+ NL K KL + L+ ++ +E + +D PK+ + DG
Sbjct: 299 KTLNLSKNKLESAWELGKVKGLKLEELWLEGNPLCSTFSDQSAYVSAIRDCFPKLLRLDG 358
Query: 498 KESKPCPTILDVESSEQLKICQYN 569
+E P I+D++SSE +K C+ N
Sbjct: 359 RELS-APVIVDIDSSETMKPCKEN 381
>AL672207-5|CAI42478.1| 302|Homo sapiens nuclear RNA export factor
5 protein.
Length = 302
Score = 30.7 bits (66), Expect = 4.7
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 4/84 (4%)
Frame = +3
Query: 330 KSYNLEKRKLXESSASFDDNNLEFKKTKIE---ITEDKNDSKTKKRGQNKSRPKIFK-DG 497
K+ NL K KL + L+ ++ +E + +D PK+ + DG
Sbjct: 125 KTLNLSKNKLESAWELGKVKGLKLEELWLEGNPLCSTFSDQSAYVSAIRDCFPKLLRLDG 184
Query: 498 KESKPCPTILDVESSEQLKICQYN 569
+E P I+D++SSE +K C+ N
Sbjct: 185 RELS-APVIVDIDSSETMKPCKEN 207
>AL672207-4|CAI42477.1| 368|Homo sapiens nuclear RNA export factor
5 protein.
Length = 368
Score = 30.7 bits (66), Expect = 4.7
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 4/84 (4%)
Frame = +3
Query: 330 KSYNLEKRKLXESSASFDDNNLEFKKTKIE---ITEDKNDSKTKKRGQNKSRPKIFK-DG 497
K+ NL K KL + L+ ++ +E + +D PK+ + DG
Sbjct: 188 KTLNLSKNKLESAWELGKVKGLKLEELWLEGNPLCSTFSDQSAYVSAIRDCFPKLLRLDG 247
Query: 498 KESKPCPTILDVESSEQLKICQYN 569
+E P I+D++SSE +K C+ N
Sbjct: 248 RELS-APVIVDIDSSETMKPCKEN 270
>AL672207-3|CAI42476.1| 305|Homo sapiens nuclear RNA export factor
5 protein.
Length = 305
Score = 30.7 bits (66), Expect = 4.7
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 4/84 (4%)
Frame = +3
Query: 330 KSYNLEKRKLXESSASFDDNNLEFKKTKIE---ITEDKNDSKTKKRGQNKSRPKIFK-DG 497
K+ NL K KL + L+ ++ +E + +D PK+ + DG
Sbjct: 125 KTLNLSKNKLESAWELGKVKGLKLEELWLEGNPLCSTFSDQSAYVSAIRDCFPKLLRLDG 184
Query: 498 KESKPCPTILDVESSEQLKICQYN 569
+E P I+D++SSE +K C+ N
Sbjct: 185 RELS-APVIVDIDSSETMKPCKEN 207
>AL672207-2|CAI42475.1| 397|Homo sapiens nuclear RNA export factor
5 protein.
Length = 397
Score = 30.7 bits (66), Expect = 4.7
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 4/84 (4%)
Frame = +3
Query: 330 KSYNLEKRKLXESSASFDDNNLEFKKTKIE---ITEDKNDSKTKKRGQNKSRPKIFK-DG 497
K+ NL K KL + L+ ++ +E + +D PK+ + DG
Sbjct: 188 KTLNLSKNKLESAWELGKVKGLKLEELWLEGNPLCSTFSDQSAYVSAIRDCFPKLLRLDG 247
Query: 498 KESKPCPTILDVESSEQLKICQYN 569
+E P I+D++SSE +K C+ N
Sbjct: 248 RELS-APVIVDIDSSETMKPCKEN 270
>AL590069-2|CAD13494.1| 626|Homo sapiens nuclear RNA export factor
2B protein.
Length = 626
Score = 30.7 bits (66), Expect = 4.7
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 4/84 (4%)
Frame = +3
Query: 330 KSYNLEKRKLXESSASFDDNNLEFKKTKIE---ITEDKNDSKTKKRGQNKSRPKIFK-DG 497
K+ NL K KL + L+ ++ +E + +D PK+ + DG
Sbjct: 299 KTLNLSKNKLESAWELGKVKGLKLEELWLEGNPLCSTFSDQSAYVSAIRDCFPKLLRLDG 358
Query: 498 KESKPCPTILDVESSEQLKICQYN 569
+E P I+D++SSE +K C+ N
Sbjct: 359 RELS-APVIVDIDSSETMKPCKEN 381
>AL590069-1|CAI40394.1| 409|Homo sapiens nuclear RNA export factor
2B protein.
Length = 409
Score = 30.7 bits (66), Expect = 4.7
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 4/84 (4%)
Frame = +3
Query: 330 KSYNLEKRKLXESSASFDDNNLEFKKTKIE---ITEDKNDSKTKKRGQNKSRPKIFK-DG 497
K+ NL K KL + L+ ++ +E + +D PK+ + DG
Sbjct: 211 KTLNLSKNKLESAWELGKVKGLKLEELWLEGNPLCSTFSDQSAYVSAIRDCFPKLLRLDG 270
Query: 498 KESKPCPTILDVESSEQLKICQYN 569
+E P I+D++SSE +K C+ N
Sbjct: 271 RELS-APVIVDIDSSETMKPCKEN 293
>AL157436-1|CAB75659.1| 409|Homo sapiens hypothetical protein
protein.
Length = 409
Score = 30.7 bits (66), Expect = 4.7
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 4/84 (4%)
Frame = +3
Query: 330 KSYNLEKRKLXESSASFDDNNLEFKKTKIE---ITEDKNDSKTKKRGQNKSRPKIFK-DG 497
K+ NL K KL + L+ ++ +E + +D PK+ + DG
Sbjct: 211 KTLNLSKNKLESAWELGKVKGLKLEELWLEGNPLCSTFSDQSAYVSAIRDCFPKLLRLDG 270
Query: 498 KESKPCPTILDVESSEQLKICQYN 569
+E P I+D++SSE +K C+ N
Sbjct: 271 RELS-APVIVDIDSSETMKPCKEN 293
>AK000423-1|BAA91154.1| 515|Homo sapiens protein ( Homo sapiens
cDNA FLJ20416 fis, clone KAT02203. ).
Length = 515
Score = 30.7 bits (66), Expect = 4.7
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 4/84 (4%)
Frame = +3
Query: 330 KSYNLEKRKLXESSASFDDNNLEFKKTKIE---ITEDKNDSKTKKRGQNKSRPKIFK-DG 497
K+ NL K KL + L+ ++ +E + +D PK+ + DG
Sbjct: 188 KTLNLSKNKLESAWELGKVKGLKLEELWLEGNPLCSTFSDQSAYVSAIRDCFPKLLRLDG 247
Query: 498 KESKPCPTILDVESSEQLKICQYN 569
+E P I+D++SSE +K C+ N
Sbjct: 248 RELS-APVIVDIDSSETMKPCKEN 270
>AJ277659-1|CAC20433.1| 626|Homo sapiens nuclear RNA export factor
2 protein.
Length = 626
Score = 30.7 bits (66), Expect = 4.7
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 4/84 (4%)
Frame = +3
Query: 330 KSYNLEKRKLXESSASFDDNNLEFKKTKIE---ITEDKNDSKTKKRGQNKSRPKIFK-DG 497
K+ NL K KL + L+ ++ +E + +D PK+ + DG
Sbjct: 299 KTLNLSKNKLESAWELGKVKGLKLEELWLEGNPLCSTFSDQSAYVSAIRDCFPKLLRLDG 358
Query: 498 KESKPCPTILDVESSEQLKICQYN 569
+E P I+D++SSE +K C+ N
Sbjct: 359 RELS-APVIVDIDSSETMKPCKEN 381
>AJ277658-1|CAC20432.1| 302|Homo sapiens nuclear RNA export factor
5 protein.
Length = 302
Score = 30.7 bits (66), Expect = 4.7
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 4/84 (4%)
Frame = +3
Query: 330 KSYNLEKRKLXESSASFDDNNLEFKKTKIE---ITEDKNDSKTKKRGQNKSRPKIFK-DG 497
K+ NL K KL + L+ ++ +E + +D PK+ + DG
Sbjct: 125 KTLNLSKNKLESAWELGKVKGLKLEELWLEGNPLCSTFSDQSAYVSAIRDCFPKLLRLDG 184
Query: 498 KESKPCPTILDVESSEQLKICQYN 569
+E P I+D++SSE +K C+ N
Sbjct: 185 RELS-APVIVDIDSSETMKPCKEN 207
>AJ277657-1|CAC20431.1| 305|Homo sapiens nuclear RNA export factor
5 protein.
Length = 305
Score = 30.7 bits (66), Expect = 4.7
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 4/84 (4%)
Frame = +3
Query: 330 KSYNLEKRKLXESSASFDDNNLEFKKTKIE---ITEDKNDSKTKKRGQNKSRPKIFK-DG 497
K+ NL K KL + L+ ++ +E + +D PK+ + DG
Sbjct: 125 KTLNLSKNKLESAWELGKVKGLKLEELWLEGNPLCSTFSDQSAYVSAIRDCFPKLLRLDG 184
Query: 498 KESKPCPTILDVESSEQLKICQYN 569
+E P I+D++SSE +K C+ N
Sbjct: 185 RELS-APVIVDIDSSETMKPCKEN 207
>AJ277655-1|CAC20429.1| 368|Homo sapiens nuclear RNA export factor
5 protein.
Length = 368
Score = 30.7 bits (66), Expect = 4.7
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 4/84 (4%)
Frame = +3
Query: 330 KSYNLEKRKLXESSASFDDNNLEFKKTKIE---ITEDKNDSKTKKRGQNKSRPKIFK-DG 497
K+ NL K KL + L+ ++ +E + +D PK+ + DG
Sbjct: 188 KTLNLSKNKLESAWELGKVKGLKLEELWLEGNPLCSTFSDQSAYVSAIRDCFPKLLRLDG 247
Query: 498 KESKPCPTILDVESSEQLKICQYN 569
+E P I+D++SSE +K C+ N
Sbjct: 248 RELS-APVIVDIDSSETMKPCKEN 270
>AJ277654-1|CAC20428.1| 397|Homo sapiens nuclear RNA export factor
5 protein.
Length = 397
Score = 30.7 bits (66), Expect = 4.7
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 4/84 (4%)
Frame = +3
Query: 330 KSYNLEKRKLXESSASFDDNNLEFKKTKIE---ITEDKNDSKTKKRGQNKSRPKIFK-DG 497
K+ NL K KL + L+ ++ +E + +D PK+ + DG
Sbjct: 188 KTLNLSKNKLESAWELGKVKGLKLEELWLEGNPLCSTFSDQSAYVSAIRDCFPKLLRLDG 247
Query: 498 KESKPCPTILDVESSEQLKICQYN 569
+E P I+D++SSE +K C+ N
Sbjct: 248 RELS-APVIVDIDSSETMKPCKEN 270
>AJ277526-1|CAC16588.1| 626|Homo sapiens nuclear RNA export factor
2 protein.
Length = 626
Score = 30.7 bits (66), Expect = 4.7
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 4/84 (4%)
Frame = +3
Query: 330 KSYNLEKRKLXESSASFDDNNLEFKKTKIE---ITEDKNDSKTKKRGQNKSRPKIFK-DG 497
K+ NL K KL + L+ ++ +E + +D PK+ + DG
Sbjct: 299 KTLNLSKNKLESAWELGKVKGLKLEELWLEGNPLCSTFSDQSAYVSAIRDCFPKLLRLDG 358
Query: 498 KESKPCPTILDVESSEQLKICQYN 569
+E P I+D++SSE +K C+ N
Sbjct: 359 RELS-APVIVDIDSSETMKPCKEN 381
>AF285596-1|AAK31975.1| 560|Homo sapiens nuclear export factor 2
protein.
Length = 560
Score = 30.7 bits (66), Expect = 4.7
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 4/84 (4%)
Frame = +3
Query: 330 KSYNLEKRKLXESSASFDDNNLEFKKTKIE---ITEDKNDSKTKKRGQNKSRPKIFK-DG 497
K+ NL K KL + L+ ++ +E + +D PK+ + DG
Sbjct: 233 KTLNLSKNKLESAWELGKVKGLKLEELWLEGNPLCSTFSDQSAYVSAIRDCFPKLLRLDG 292
Query: 498 KESKPCPTILDVESSEQLKICQYN 569
+E P I+D++SSE +K C+ N
Sbjct: 293 RELS-APVIVDIDSSETMKPCKEN 315
>D87440-1|BAA13382.2| 702|Homo sapiens KIAA0252 protein.
Length = 702
Score = 30.3 bits (65), Expect = 6.2
Identities = 18/77 (23%), Positives = 34/77 (44%)
Frame = +3
Query: 288 KDEYVLQKSNIIEEKSYNLEKRKLXESSASFDDNNLEFKKTKIEITEDKNDSKTKKRGQN 467
+DE + +KS +EE EKRK + L+ + + E++ D K+ ++
Sbjct: 263 RDEKLDKKSQAMEELKAEREKRKNRTAELLAKKQPLKTSEVYSDDEEEEEDDKSSEKSDR 322
Query: 468 KSRPKIFKDGKESKPCP 518
SR + +E + P
Sbjct: 323 SSRTSSSDEEEEKEEIP 339
>BC015052-1|AAH15052.1| 585|Homo sapiens Rtf1, Paf1/RNA polymerase
II complex component, homolog (S. cerevisiae) protein.
Length = 585
Score = 30.3 bits (65), Expect = 6.2
Identities = 18/77 (23%), Positives = 34/77 (44%)
Frame = +3
Query: 288 KDEYVLQKSNIIEEKSYNLEKRKLXESSASFDDNNLEFKKTKIEITEDKNDSKTKKRGQN 467
+DE + +KS +EE EKRK + L+ + + E++ D K+ ++
Sbjct: 146 RDEKLDKKSQAMEELKAEREKRKNRTAELLAKKQPLKTSEVYSDDEEEEEDDKSSEKSDR 205
Query: 468 KSRPKIFKDGKESKPCP 518
SR + +E + P
Sbjct: 206 SSRTSSSDEEEEKEEIP 222
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,999,529
Number of Sequences: 237096
Number of extensions: 1236404
Number of successful extensions: 3356
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 3097
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3323
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7197658880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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