Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_F24
(651 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L18963-1|AAC14457.1| 152|Caenorhabditis elegans unc-60 protein. 69 3e-12
AF024494-2|AAL02463.1| 152|Caenorhabditis elegans Uncoordinated... 69 3e-12
L18963-2|AAC14458.1| 165|Caenorhabditis elegans unc-60 protein. 45 5e-05
AF024494-3|AAL02461.1| 165|Caenorhabditis elegans Uncoordinated... 45 5e-05
AF024494-1|AAL02462.2| 212|Caenorhabditis elegans Uncoordinated... 44 7e-05
Z48717-10|CAA88612.2| 423|Caenorhabditis elegans Hypothetical p... 29 2.2
Z48584-9|CAA88478.2| 423|Caenorhabditis elegans Hypothetical pr... 29 2.2
AC025723-3|AAK29935.1| 254|Caenorhabditis elegans Hypothetical ... 29 2.9
Z82257-1|CAB05120.2| 1043|Caenorhabditis elegans Hypothetical pr... 27 8.7
U80450-11|AAM15595.1| 664|Caenorhabditis elegans Temporarily as... 27 8.7
U80450-9|AAK77615.1| 1112|Caenorhabditis elegans Temporarily ass... 27 8.7
U80450-8|AAK77616.1| 949|Caenorhabditis elegans Temporarily ass... 27 8.7
AJ271057-1|CAB65957.1| 1043|Caenorhabditis elegans Ack related n... 27 8.7
>L18963-1|AAC14457.1| 152|Caenorhabditis elegans unc-60 protein.
Length = 152
Score = 68.9 bits (161), Expect = 3e-12
Identities = 36/85 (42%), Positives = 51/85 (60%), Gaps = 3/85 (3%)
Frame = +3
Query: 66 MASGVTVSDACKTTYEEIKKDKKHRYVVFYI-RDEKQIDVETVGERNAEYEQFLEDLQK- 239
MASGV V +CK Y+ + +H Y++F I +++ I VE VGE+NA Y +F+E+++K
Sbjct: 1 MASGVKVDPSCKNAYDLLHNKHQHSYIIFKIDKNDTAIVVEKVGEKNAPYAEFVEEMKKL 60
Query: 240 -GGTGECRYGLFDFEYTHQCQGHVG 311
ECRY D E T Q QG G
Sbjct: 61 VEDGKECRYAAVDVEVTVQRQGAEG 85
Score = 46.4 bits (105), Expect = 2e-05
Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Frame = +1
Query: 265 ACLTLNTRTSARXTSEASKKQKLFLMSWCPDTAKVXKXMLYSSSFDALKKSLVGVQK--Y 438
A + + + S K+ + +CPD A V + MLY+SS ALK SL G++
Sbjct: 70 AAVDVEVTVQRQGAEGTSTLNKVIFVQYCPDNAPVRRRMLYASSVRALKASL-GLESLFQ 128
Query: 439 IQATDLSEASQEAVEEKLRATDR 507
+QA+++S+ +++V+ L + R
Sbjct: 129 VQASEMSDLDEKSVKSDLMSNQR 151
>AF024494-2|AAL02463.1| 152|Caenorhabditis elegans Uncoordinated
protein 60, isoform c protein.
Length = 152
Score = 68.9 bits (161), Expect = 3e-12
Identities = 36/85 (42%), Positives = 51/85 (60%), Gaps = 3/85 (3%)
Frame = +3
Query: 66 MASGVTVSDACKTTYEEIKKDKKHRYVVFYI-RDEKQIDVETVGERNAEYEQFLEDLQK- 239
MASGV V +CK Y+ + +H Y++F I +++ I VE VGE+NA Y +F+E+++K
Sbjct: 1 MASGVKVDPSCKNAYDLLHNKHQHSYIIFKIDKNDTAIVVEKVGEKNAPYAEFVEEMKKL 60
Query: 240 -GGTGECRYGLFDFEYTHQCQGHVG 311
ECRY D E T Q QG G
Sbjct: 61 VEDGKECRYAAVDVEVTVQRQGAEG 85
Score = 46.4 bits (105), Expect = 2e-05
Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Frame = +1
Query: 265 ACLTLNTRTSARXTSEASKKQKLFLMSWCPDTAKVXKXMLYSSSFDALKKSLVGVQK--Y 438
A + + + S K+ + +CPD A V + MLY+SS ALK SL G++
Sbjct: 70 AAVDVEVTVQRQGAEGTSTLNKVIFVQYCPDNAPVRRRMLYASSVRALKASL-GLESLFQ 128
Query: 439 IQATDLSEASQEAVEEKLRATDR 507
+QA+++S+ +++V+ L + R
Sbjct: 129 VQASEMSDLDEKSVKSDLMSNQR 151
>L18963-2|AAC14458.1| 165|Caenorhabditis elegans unc-60 protein.
Length = 165
Score = 44.8 bits (101), Expect = 5e-05
Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Frame = +1
Query: 289 TSARXTSEASKKQKLFLMSWCPDTAKVXKXMLYSSSFDALKKSL-VGVQKYIQATDLSEA 465
T +R + SK K+ + CPD A + K M+Y+SS A+K SL G Q +D SE
Sbjct: 90 TCSRVGAGTSKMDKIIFLQICPDGASIKKKMVYASSAAAIKTSLGTGKILQFQVSDESEM 149
Query: 466 SQEAVEEKL 492
S + + KL
Sbjct: 150 SHKELLNKL 158
Score = 41.1 bits (92), Expect = 7e-04
Identities = 26/91 (28%), Positives = 52/91 (57%), Gaps = 17/91 (18%)
Frame = +3
Query: 66 MASGVTVSDACKTTYEEIKKDKK-HRYVVFYIRDEKQIDVETVGERN------------- 203
M+SGV V +T+++++ + +K +RY++F I DE ++ VE ++
Sbjct: 1 MSSGVMVDPDVQTSFQKLSEGRKEYRYIIFKI-DENKVIVEAAVTQDQLGITGDDYDDSS 59
Query: 204 -AEYEQFLEDLQK--GGTGECRYGLFDFEYT 287
A +++F+ED++ +CRY +FDF++T
Sbjct: 60 KAAFDKFVEDVKSRTDNLTDCRYAVFDFKFT 90
>AF024494-3|AAL02461.1| 165|Caenorhabditis elegans Uncoordinated
protein 60, isoform a protein.
Length = 165
Score = 44.8 bits (101), Expect = 5e-05
Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Frame = +1
Query: 289 TSARXTSEASKKQKLFLMSWCPDTAKVXKXMLYSSSFDALKKSL-VGVQKYIQATDLSEA 465
T +R + SK K+ + CPD A + K M+Y+SS A+K SL G Q +D SE
Sbjct: 90 TCSRVGAGTSKMDKIIFLQICPDGASIKKKMVYASSAAAIKTSLGTGKILQFQVSDESEM 149
Query: 466 SQEAVEEKL 492
S + + KL
Sbjct: 150 SHKELLNKL 158
Score = 41.1 bits (92), Expect = 7e-04
Identities = 26/91 (28%), Positives = 52/91 (57%), Gaps = 17/91 (18%)
Frame = +3
Query: 66 MASGVTVSDACKTTYEEIKKDKK-HRYVVFYIRDEKQIDVETVGERN------------- 203
M+SGV V +T+++++ + +K +RY++F I DE ++ VE ++
Sbjct: 1 MSSGVMVDPDVQTSFQKLSEGRKEYRYIIFKI-DENKVIVEAAVTQDQLGITGDDYDDSS 59
Query: 204 -AEYEQFLEDLQK--GGTGECRYGLFDFEYT 287
A +++F+ED++ +CRY +FDF++T
Sbjct: 60 KAAFDKFVEDVKSRTDNLTDCRYAVFDFKFT 90
>AF024494-1|AAL02462.2| 212|Caenorhabditis elegans Uncoordinated
protein 60, isoform b protein.
Length = 212
Score = 44.4 bits (100), Expect = 7e-05
Identities = 27/69 (39%), Positives = 44/69 (63%), Gaps = 2/69 (2%)
Frame = +1
Query: 307 SEASKKQKLFLMSWCPDTAKVXKXMLYSSSFDALKKSLVGVQK--YIQATDLSEASQEAV 480
SE S K+ L++ CPD A V + MLY+SS ALK SL G++ +QA+++S+ +++V
Sbjct: 147 SEMSHKE---LLNNCPDNAPVRRRMLYASSVRALKASL-GLESLFQVQASEMSDLDEKSV 202
Query: 481 EEKLRATDR 507
+ L + R
Sbjct: 203 KSDLMSNQR 211
Score = 42.3 bits (95), Expect = 3e-04
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = +1
Query: 289 TSARXTSEASKKQKLFLMSWCPDTAKVXKXMLYSSSFDALKKSL-VGVQKYIQATDLSEA 465
T +R + SK K+ + CPD A + K M+Y+SS A+K SL G Q +D SE
Sbjct: 90 TCSRVGAGTSKMDKIIFLQICPDGASIKKKMVYASSAAAIKTSLGTGKILQFQVSDESEM 149
Query: 466 SQE 474
S +
Sbjct: 150 SHK 152
Score = 41.1 bits (92), Expect = 7e-04
Identities = 26/91 (28%), Positives = 52/91 (57%), Gaps = 17/91 (18%)
Frame = +3
Query: 66 MASGVTVSDACKTTYEEIKKDKK-HRYVVFYIRDEKQIDVETVGERN------------- 203
M+SGV V +T+++++ + +K +RY++F I DE ++ VE ++
Sbjct: 1 MSSGVMVDPDVQTSFQKLSEGRKEYRYIIFKI-DENKVIVEAAVTQDQLGITGDDYDDSS 59
Query: 204 -AEYEQFLEDLQK--GGTGECRYGLFDFEYT 287
A +++F+ED++ +CRY +FDF++T
Sbjct: 60 KAAFDKFVEDVKSRTDNLTDCRYAVFDFKFT 90
>Z48717-10|CAA88612.2| 423|Caenorhabditis elegans Hypothetical
protein ZK1321.4 protein.
Length = 423
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -3
Query: 280 SKSNRPYLHSPVPPFCRSSRNCSYSALRSPTVST 179
S N P HSP PPF S N SY+ ++ T +T
Sbjct: 188 SHHNIPIRHSPAPPFTTS--NSSYNNIKKSTDNT 219
>Z48584-9|CAA88478.2| 423|Caenorhabditis elegans Hypothetical
protein ZK1321.4 protein.
Length = 423
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -3
Query: 280 SKSNRPYLHSPVPPFCRSSRNCSYSALRSPTVST 179
S N P HSP PPF S N SY+ ++ T +T
Sbjct: 188 SHHNIPIRHSPAPPFTTS--NSSYNNIKKSTDNT 219
>AC025723-3|AAK29935.1| 254|Caenorhabditis elegans Hypothetical
protein Y54F10AM.6 protein.
Length = 254
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = -1
Query: 576 RQGRSVGERVRFRRELVCKCC 514
R+GR G+ ++FR E VC+CC
Sbjct: 196 RKGR--GKNIKFRTEKVCRCC 214
>Z82257-1|CAB05120.2| 1043|Caenorhabditis elegans Hypothetical
protein C01C7.1 protein.
Length = 1043
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +3
Query: 456 LGSVSGGRRREAPRHRSPINSIYTRARDETEPA 554
L ++S R+ P R P+ ++Y R +D PA
Sbjct: 688 LTALSSSRKDPIPAPRGPVAAVYARGKDIPTPA 720
>U80450-11|AAM15595.1| 664|Caenorhabditis elegans Temporarily
assigned gene nameprotein 163, isoform d protein.
Length = 664
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -3
Query: 505 DRWRGASLRRPPETLPRGRSLGCTSELRQGT 413
+RWRG +PP PR S + L +GT
Sbjct: 435 ERWRGRMRGKPPTPPPRESSASPVNSLPRGT 465
>U80450-9|AAK77615.1| 1112|Caenorhabditis elegans Temporarily
assigned gene nameprotein 163, isoform a protein.
Length = 1112
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -3
Query: 505 DRWRGASLRRPPETLPRGRSLGCTSELRQGT 413
+RWRG +PP PR S + L +GT
Sbjct: 435 ERWRGRMRGKPPTPPPRESSASPVNSLPRGT 465
>U80450-8|AAK77616.1| 949|Caenorhabditis elegans Temporarily
assigned gene nameprotein 163, isoform c protein.
Length = 949
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -3
Query: 505 DRWRGASLRRPPETLPRGRSLGCTSELRQGT 413
+RWRG +PP PR S + L +GT
Sbjct: 435 ERWRGRMRGKPPTPPPRESSASPVNSLPRGT 465
>AJ271057-1|CAB65957.1| 1043|Caenorhabditis elegans Ack related
non-receptor tyrosinekinase protein.
Length = 1043
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +3
Query: 456 LGSVSGGRRREAPRHRSPINSIYTRARDETEPA 554
L ++S R+ P R P+ ++Y R +D PA
Sbjct: 688 LTALSSSRKDPIPAPRGPVAAVYARGKDIPTPA 720
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,248,385
Number of Sequences: 27780
Number of extensions: 256885
Number of successful extensions: 977
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 900
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 970
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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