Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_F23
(644 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC091125-2|AAK27887.2| 202|Caenorhabditis elegans Hypothetical ... 146 9e-36
CU457741-8|CAM36349.1| 544|Caenorhabditis elegans Hypothetical ... 31 0.92
AC199172-2|ABO33275.1| 305|Caenorhabditis elegans F-box a prote... 29 3.7
Z68748-12|CAN86588.1| 792|Caenorhabditis elegans Hypothetical p... 28 4.9
Z68748-10|CAL36500.1| 789|Caenorhabditis elegans Hypothetical p... 28 4.9
Z68748-9|CAL36499.1| 796|Caenorhabditis elegans Hypothetical pr... 28 4.9
U80027-10|AAC48118.3| 295|Caenorhabditis elegans Serpentine rec... 28 4.9
Z82262-5|CAE17771.1| 679|Caenorhabditis elegans Hypothetical pr... 28 6.5
U40030-4|AAS80338.1| 909|Caenorhabditis elegans Hypothetical pr... 28 6.5
U40030-3|AAS80339.1| 911|Caenorhabditis elegans Hypothetical pr... 28 6.5
AL023847-4|CAA19550.1| 349|Caenorhabditis elegans Hypothetical ... 28 6.5
>AC091125-2|AAK27887.2| 202|Caenorhabditis elegans Hypothetical
protein Y67D2.5 protein.
Length = 202
Score = 146 bits (355), Expect = 9e-36
Identities = 77/182 (42%), Positives = 114/182 (62%), Gaps = 9/182 (4%)
Frame = +2
Query: 77 LKLNSHTKIVGANIILVPYKKHHVPVYHEWMKSEELQKLTASEPLNLEQEYEMQKTWHDD 256
+KLNS+ KIV ILVPY+ HV YH+WM++EE+++LT SE L+L++EYEMQKTW +D
Sbjct: 1 MKLNSNVKIVAKKCILVPYEPCHVAKYHKWMENEEIRRLTGSEQLSLDEEYEMQKTWRND 60
Query: 257 EXKCTFIILDKDIFNNTAFDETGAMIGDTNIFIT--------DKELAIXXIXIMIAEPSA 412
E K TFI+L+ N + +E M+GD N+FI+ ++ + +MIAEP
Sbjct: 61 EDKLTFIVLEM----NESGEEVDHMLGDVNLFISTSPSTENPSDDVITGEVEVMIAEPRG 116
Query: 413 RGKKXGWEAVKLMLLYGIKYIKIQTFEAKILLQNVISIKMF-KKLXFQXKSVSAVFQEVT 589
RGK G EAV++++ + + +KI+ F KI N S+ +F KKL F+ S F+E T
Sbjct: 117 RGKGIGEEAVRVIIAWAYENLKIEQFCVKITDDNTPSLSLFKKKLGFKQIGYSTAFKEFT 176
Query: 590 LD 595
+
Sbjct: 177 FE 178
>CU457741-8|CAM36349.1| 544|Caenorhabditis elegans Hypothetical
protein C42C1.8 protein.
Length = 544
Score = 30.7 bits (66), Expect = 0.92
Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Frame = -3
Query: 477 FIYFIP*SNINLTASHPXFFPLADGSAIIIXIXXIANSLSVMNI-FVSPIIAPVSSKAVL 301
FI F+P S I+ T FP + + I I +AN L VM + V+P+I S +
Sbjct: 196 FIMFLP-SKISATC-----FPPSQRT-IATTIGVMANPLGVMVVNLVAPLIVQSSDDVWI 248
Query: 300 LNISLSKMINVHLXSSSCHVFCI 232
LN+ L + V L + C + C+
Sbjct: 249 LNVILFIICFVALFFAGCSLGCL 271
>AC199172-2|ABO33275.1| 305|Caenorhabditis elegans F-box a protein
protein 32 protein.
Length = 305
Score = 28.7 bits (61), Expect = 3.7
Identities = 20/89 (22%), Positives = 39/89 (43%), Gaps = 1/89 (1%)
Frame = +2
Query: 305 TAFDETGAMIGDTNIFITDKELAIXXIXIMIAEPSA-RGKKXGWEAVKLMLLYGIKYIKI 481
TA D+ G +I + D +++ I I + G W + + G+ YIK
Sbjct: 40 TAIDKLGTHFNKISIRLWDNSVSVDFDGIGINYCNEFNGGSCVWFKKQQKTIEGVNYIKA 99
Query: 482 QTFEAKILLQNVISIKMFKKLXFQXKSVS 568
+ KILL++ + + + ++ +VS
Sbjct: 100 AFIDLKILLRHTSQLYISSREKYRHNTVS 128
>Z68748-12|CAN86588.1| 792|Caenorhabditis elegans Hypothetical
protein F13H10.4c protein.
Length = 792
Score = 28.3 bits (60), Expect = 4.9
Identities = 18/80 (22%), Positives = 41/80 (51%)
Frame = +2
Query: 77 LKLNSHTKIVGANIILVPYKKHHVPVYHEWMKSEELQKLTASEPLNLEQEYEMQKTWHDD 256
L+L +TK+ ++ +++ +K + YH+++ ++PLN Y + + +D+
Sbjct: 219 LRLKDNTKLQTSHSVMLTDEKIPIDRYHDFVVDNTQAYNAPNQPLN----YILNEKHNDE 274
Query: 257 EXKCTFIILDKDIFNNTAFD 316
E K FI + ++ + FD
Sbjct: 275 EGK--FIAVQLNLGSQAEFD 292
>Z68748-10|CAL36500.1| 789|Caenorhabditis elegans Hypothetical
protein F13H10.4b protein.
Length = 789
Score = 28.3 bits (60), Expect = 4.9
Identities = 18/80 (22%), Positives = 41/80 (51%)
Frame = +2
Query: 77 LKLNSHTKIVGANIILVPYKKHHVPVYHEWMKSEELQKLTASEPLNLEQEYEMQKTWHDD 256
L+L +TK+ ++ +++ +K + YH+++ ++PLN Y + + +D+
Sbjct: 219 LRLKDNTKLQTSHSVMLTDEKIPIDRYHDFVVDNTQAYNAPNQPLN----YILNEKHNDE 274
Query: 257 EXKCTFIILDKDIFNNTAFD 316
E K FI + ++ + FD
Sbjct: 275 EGK--FIAVQLNLGSQAEFD 292
>Z68748-9|CAL36499.1| 796|Caenorhabditis elegans Hypothetical
protein F13H10.4a protein.
Length = 796
Score = 28.3 bits (60), Expect = 4.9
Identities = 18/80 (22%), Positives = 41/80 (51%)
Frame = +2
Query: 77 LKLNSHTKIVGANIILVPYKKHHVPVYHEWMKSEELQKLTASEPLNLEQEYEMQKTWHDD 256
L+L +TK+ ++ +++ +K + YH+++ ++PLN Y + + +D+
Sbjct: 226 LRLKDNTKLQTSHSVMLTDEKIPIDRYHDFVVDNTQAYNAPNQPLN----YILNEKHNDE 281
Query: 257 EXKCTFIILDKDIFNNTAFD 316
E K FI + ++ + FD
Sbjct: 282 EGK--FIAVQLNLGSQAEFD 299
>U80027-10|AAC48118.3| 295|Caenorhabditis elegans Serpentine
receptor, class bc (class b-like) protein 5 protein.
Length = 295
Score = 28.3 bits (60), Expect = 4.9
Identities = 18/73 (24%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
Frame = -3
Query: 435 SHPXFFPLADGSAIIIXIXXIANSL--SVMNIFVSPIIAPVSSKAVLLNISLSKMINVHL 262
S P PL A+I+ + +S+ ++MN++ I K +L L + ++
Sbjct: 2 SSPEEGPLMSVPAVIVTTIGVISSIYTTIMNVYFITKIGKTRQKMILFFYRLFLDVAYNV 61
Query: 261 XSSSCHVFCISYS 223
+ + FCI YS
Sbjct: 62 LACAYMTFCIVYS 74
>Z82262-5|CAE17771.1| 679|Caenorhabditis elegans Hypothetical
protein C43F9.10 protein.
Length = 679
Score = 27.9 bits (59), Expect = 6.5
Identities = 23/91 (25%), Positives = 42/91 (46%), Gaps = 5/91 (5%)
Frame = +2
Query: 113 NIILVPYKKHHVPVYHEWMK--SEELQKLTASEPLNLEQEYEMQKTWHDDEXKCTFI--- 277
+I+L+ +K + + E +K EE++ T E + L+Q + K W +E K I
Sbjct: 384 SIVLIVVRKDIISNFVEKVKYGHEEIKVHTTFENVTLKQAIALNKKWAREEYKDLIIPNC 443
Query: 278 ILDKDIFNNTAFDETGAMIGDTNIFITDKEL 370
+K FD++ + GD +F+ L
Sbjct: 444 YPNKAEHGFCEFDKSN-LTGDLTVFLVGNSL 473
>U40030-4|AAS80338.1| 909|Caenorhabditis elegans Hypothetical
protein T13C2.6a protein.
Length = 909
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/46 (28%), Positives = 19/46 (41%)
Frame = +2
Query: 131 YKKHHVPVYHEWMKSEELQKLTASEPLNLEQEYEMQKTWHDDEXKC 268
Y K P+ ++ E L + E+E +KTWHD C
Sbjct: 751 YHKQAQPLMQNKCENSECDHLCLPRAVYREKERVHEKTWHDRPFSC 796
>U40030-3|AAS80339.1| 911|Caenorhabditis elegans Hypothetical
protein T13C2.6b protein.
Length = 911
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/46 (28%), Positives = 19/46 (41%)
Frame = +2
Query: 131 YKKHHVPVYHEWMKSEELQKLTASEPLNLEQEYEMQKTWHDDEXKC 268
Y K P+ ++ E L + E+E +KTWHD C
Sbjct: 753 YHKQAQPLMQNKCENSECDHLCLPRAVYREKERVHEKTWHDRPFSC 798
>AL023847-4|CAA19550.1| 349|Caenorhabditis elegans Hypothetical
protein Y57A10C.8 protein.
Length = 349
Score = 27.9 bits (59), Expect = 6.5
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = -2
Query: 370 QLFVSYEYICIPNHCT--CFIEGCIIKYILVQNDKCAFXFVIM 248
Q+F S EY +PN T CF+ +KY+ N +F IM
Sbjct: 171 QIFSS-EYQRVPNCATMACFVNKIFLKYLSYSNTLSSFFVAIM 212
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,828,724
Number of Sequences: 27780
Number of extensions: 236327
Number of successful extensions: 660
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 643
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 658
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1423653030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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