Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_F22
         (655 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_14680| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.62 
SB_40655| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.9  
SB_36894| Best HMM Match : PXA (HMM E-Value=2.5e-13)                   28   5.8  

>SB_14680| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 233

 Score = 31.5 bits (68), Expect = 0.62
 Identities = 18/53 (33%), Positives = 30/53 (56%)
 Frame = +3

Query: 234 TSLDVIAPSDAGIVIRFKNLNITGLKNQQISDFQMDTKAKTVLLXTKADLHIV 392
           TS D+   S+  ++   K LN + + +QQISD Q+D   +T+   T+ D  I+
Sbjct: 169 TSSDLAGQSNNQVIEELKKLNCSVVLSQQISDNQLDLDLQTL---TRNDARII 218


>SB_40655| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1074

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
 Frame = +3

Query: 507 NGVQHFEVQPETFTCESIGEPXITL-SSDLSSALEKDSG-NNSLGT 638
           N + H +++PE   CESI    I L    L+  L+KD    +S GT
Sbjct: 467 NNIVHLDLKPENIMCESINSNQIKLVDFGLARELKKDEEVKSSFGT 512


>SB_36894| Best HMM Match : PXA (HMM E-Value=2.5e-13)
          Length = 1252

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 12/44 (27%), Positives = 23/44 (52%)
 Frame = -3

Query: 221 IDRPYVVLWYPFTGFLQKLLCRTAKALHVTKFAGF*KSISIGSH 90
           I+R +VV W+   G  +  +  T KAL +    G+ ++  + +H
Sbjct: 308 INRDFVVSWFRDVGEGEGFVGETRKALEILSLEGYKRACDVDAH 351


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,716,190
Number of Sequences: 59808
Number of extensions: 443292
Number of successful extensions: 947
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 908
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 947
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1669334250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)