Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_F17
         (386 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    21   5.6  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    21   5.6  
AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A prot...    21   5.6  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    21   5.6  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    20   7.4  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    20   7.4  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    20   7.4  
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    20   9.8  
AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esteras...    20   9.8  

>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = +1

Query: 274 SVIHMPLPRHHHSG 315
           S+++  L +HHH+G
Sbjct: 66  SMVNYTLGQHHHNG 79


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = +1

Query: 274 SVIHMPLPRHHHSG 315
           S+++  L +HHH+G
Sbjct: 125 SMVNYTLGQHHHNG 138


>AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A
           protein.
          Length = 150

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = +1

Query: 274 SVIHMPLPRHHHSG 315
           S+++  L +HHH+G
Sbjct: 66  SMVNYTLGQHHHNG 79


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = +1

Query: 274 SVIHMPLPRHHHSG 315
           S+++  L +HHH+G
Sbjct: 125 SMVNYTLGQHHHNG 138


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -3

Query: 87  FHFCSDSSRYFYLTK 43
           F  CS+S+R FY  +
Sbjct: 362 FIICSESNRKFYFKR 376


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +3

Query: 171 IFKXLSMLRAVSVLCGESQSFLL 239
           I +  +ML   +VLCG  + F+L
Sbjct: 436 IGQKFAMLEIKTVLCGILKKFIL 458


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +3

Query: 171 IFKXLSMLRAVSVLCGESQSFLL 239
           I +  +ML   +VLCG  + F+L
Sbjct: 436 IGQKFAMLEIKTVLCGILKKFIL 458


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 19.8 bits (39), Expect = 9.8
 Identities = 6/8 (75%), Positives = 6/8 (75%)
 Frame = -3

Query: 93  NIFHFCSD 70
           NI HFC D
Sbjct: 175 NIIHFCGD 182


>AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esterase
           protein.
          Length = 510

 Score = 19.8 bits (39), Expect = 9.8
 Identities = 6/8 (75%), Positives = 6/8 (75%)
 Frame = -3

Query: 93  NIFHFCSD 70
           NI HFC D
Sbjct: 175 NIIHFCGD 182


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,895
Number of Sequences: 336
Number of extensions: 1273
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8119573
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)