Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_F17
         (386 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           27   0.32 
AF080565-1|AAC31945.1|  324|Anopheles gambiae Antennapedia homeo...    24   2.2  
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         22   9.0  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         22   9.0  

>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 26.6 bits (56), Expect = 0.32
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +1

Query: 265  TNSSVIHMPLPRHHHSGQGK 324
            TN S  H P P HHH+G G+
Sbjct: 1394 TNFSYQH-PHPHHHHNGSGR 1412


>AF080565-1|AAC31945.1|  324|Anopheles gambiae Antennapedia homeotic
           protein protein.
          Length = 324

 Score = 23.8 bits (49), Expect = 2.2
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +1

Query: 244 PPLXEMPTNSSVIHMPLPRHH 306
           PPL +M  +     M +P+HH
Sbjct: 144 PPLDQMGHHMGTAQMTIPQHH 164


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 21.8 bits (44), Expect = 9.0
 Identities = 8/28 (28%), Positives = 12/28 (42%)
 Frame = +1

Query: 295 PRHHHSGQGKINKYRTTVLDIGSITSIT 378
           P HHHS Q   +    T+     + + T
Sbjct: 16  PHHHHSSQSPTSTTTVTMATASPVPACT 43


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 21.8 bits (44), Expect = 9.0
 Identities = 8/28 (28%), Positives = 12/28 (42%)
 Frame = +1

Query: 295 PRHHHSGQGKINKYRTTVLDIGSITSIT 378
           P HHHS Q   +    T+     + + T
Sbjct: 16  PHHHHSSQSPTSTTTVTMATASPVPACT 43


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 318,177
Number of Sequences: 2352
Number of extensions: 5220
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 29929410
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)