Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_F10
         (471 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_04_0360 + 22353057-22353691,22354716-22355144,22355233-223553...    32   0.20 
04_04_1128 + 31103582-31103709,31105231-31105344,31105906-311064...    29   1.9  
01_05_0553 + 23185473-23186188,23187096-23187101,23187230-231873...    28   3.3  
10_08_0193 + 15634351-15634383,15634852-15635488,15635577-156356...    27   5.8  
01_06_1229 + 35551522-35552169                                         27   7.6  

>02_04_0360 +
           22353057-22353691,22354716-22355144,22355233-22355311,
           22355472-22355594,22356256-22356372,22356636-22356833
          Length = 526

 Score = 32.3 bits (70), Expect = 0.20
 Identities = 11/18 (61%), Positives = 15/18 (83%)
 Frame = +2

Query: 122 PEDMGYGDYPKLPDIGED 175
           PED G G+ P++PD+GED
Sbjct: 62  PEDAGEGEQPRVPDLGED 79


>04_04_1128 +
           31103582-31103709,31105231-31105344,31105906-31106446,
           31106911-31107003,31107041-31107194,31107296-31107498
          Length = 410

 Score = 29.1 bits (62), Expect = 1.9
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = -2

Query: 326 KTXSIDAAVKIFALC*CHSDLHQIFXQ*RATVH 228
           KT   D A+K+     CHSDLH I  + R  V+
Sbjct: 44  KTGDDDVAIKVLYCGICHSDLHTIKNEWRNAVY 76


>01_05_0553 + 23185473-23186188,23187096-23187101,23187230-23187374,
            23187887-23188159,23188275-23188338,23188479-23188744,
            23188951-23189045,23189544-23189718,23190669-23191063,
            23191830-23191953,23192864-23192959,23193049-23193120,
            23194687-23194824,23195369-23195549,23195602-23195963,
            23196944-23197386,23197461-23197763,23197857-23198081,
            23198260-23198350,23198702-23198779,23198939-23199229,
            23199316-23199513,23199681-23200163,23200488-23200562,
            23201163-23201324,23201400-23201729,23201816-23201916,
            23202477-23202581,23202931-23203162,23203913-23204257,
            23204346-23204447,23206010-23206153,23206463-23206551,
            23206979-23207061,23207172-23207287,23207824-23207909,
            23208461-23208560,23209270-23209335
          Length = 2451

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -2

Query: 356  LEEQILLEYPKTXSIDAAVKIFALC*CH 273
            L  Q+ L+Y     +DAA  +  LC CH
Sbjct: 1353 LAAQLALKYLHNWDLDAAANVLTLCICH 1380


>10_08_0193 +
           15634351-15634383,15634852-15635488,15635577-15635654,
           15635772-15635858,15635921-15635970
          Length = 294

 Score = 27.5 bits (58), Expect = 5.8
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +2

Query: 155 LPDIGEDSKDPHYPYDNPELXRNFNEPL 238
           L DI E +  P  PY++P++ R   EP+
Sbjct: 46  LADIPEWTGKPSLPYEDPDMLRFLGEPI 73


>01_06_1229 + 35551522-35552169
          Length = 215

 Score = 27.1 bits (57), Expect = 7.6
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = +2

Query: 92  GMTVXEYTPYPEDMGYGDYP 151
           GMT  E  P  E +GYGD P
Sbjct: 140 GMTTLEMAPMQEAVGYGDGP 159


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,183,611
Number of Sequences: 37544
Number of extensions: 202243
Number of successful extensions: 465
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 455
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 465
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 955200320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)