Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_F10
(471 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC019276-1|AAH19276.1| 186|Homo sapiens NADH dehydrogenase (ubi... 102 7e-22
BC000466-1|AAH00466.1| 186|Homo sapiens NADH dehydrogenase (ubi... 102 7e-22
AL133352-4|CAH73564.1| 172|Homo sapiens NADH dehydrogenase (ubi... 102 7e-22
AL133352-3|CAH73563.1| 186|Homo sapiens NADH dehydrogenase (ubi... 102 7e-22
AL133352-2|CAH73562.1| 155|Homo sapiens NADH dehydrogenase (ubi... 102 7e-22
AF115968-1|AAP97239.1| 186|Homo sapiens NADH:ubiquinone oxidore... 102 7e-22
AF044958-1|AAD05422.1| 186|Homo sapiens NADH:ubiquinone oxidore... 102 7e-22
CR533490-1|CAG38521.1| 186|Homo sapiens NDUFB8 protein. 99 4e-21
Y18944-1|CAB46274.1| 43|Homo sapiens NADH dehydrogenase (ubiqu... 52 8e-07
AK126865-1|BAC86728.1| 131|Homo sapiens protein ( Homo sapiens ... 31 2.0
>BC019276-1|AAH19276.1| 186|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 beta subcomplex, 8, 19kDa protein.
Length = 186
Score = 102 bits (244), Expect = 7e-22
Identities = 45/80 (56%), Positives = 56/80 (70%), Gaps = 1/80 (1%)
Frame = +2
Query: 47 YPKTPEERAAAAKKYGMTVXEYTPYPED-MGYGDYPKLPDIGEDSKDPHYPYDNPELXRN 223
YP+TPEERAAAAKKY M V +Y PYP+D MGYGDYPKLPD + +DP Y +D P L N
Sbjct: 41 YPRTPEERAAAAKKYNMRVEDYEPYPDDGMGYGDYPKLPDRSQHERDPWYSWDQPGLRLN 100
Query: 224 FNEPLHATAXIFGGDRCDIS 283
+ EP+H ++ +R D S
Sbjct: 101 WGEPMHWHLDMYNRNRVDTS 120
>BC000466-1|AAH00466.1| 186|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 beta subcomplex, 8, 19kDa protein.
Length = 186
Score = 102 bits (244), Expect = 7e-22
Identities = 45/80 (56%), Positives = 56/80 (70%), Gaps = 1/80 (1%)
Frame = +2
Query: 47 YPKTPEERAAAAKKYGMTVXEYTPYPED-MGYGDYPKLPDIGEDSKDPHYPYDNPELXRN 223
YP+TPEERAAAAKKY M V +Y PYP+D MGYGDYPKLPD + +DP Y +D P L N
Sbjct: 41 YPRTPEERAAAAKKYNMRVEDYEPYPDDGMGYGDYPKLPDRSQHERDPWYSWDQPGLRLN 100
Query: 224 FNEPLHATAXIFGGDRCDIS 283
+ EP+H ++ +R D S
Sbjct: 101 WGEPMHWHLDMYNRNRVDTS 120
>AL133352-4|CAH73564.1| 172|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 beta subcomplex, 8, 19kDa protein.
Length = 172
Score = 102 bits (244), Expect = 7e-22
Identities = 45/80 (56%), Positives = 56/80 (70%), Gaps = 1/80 (1%)
Frame = +2
Query: 47 YPKTPEERAAAAKKYGMTVXEYTPYPED-MGYGDYPKLPDIGEDSKDPHYPYDNPELXRN 223
YP+TPEERAAAAKKY M V +Y PYP+D MGYGDYPKLPD + +DP Y +D P L N
Sbjct: 41 YPRTPEERAAAAKKYNMRVEDYEPYPDDGMGYGDYPKLPDRSQHERDPWYSWDQPGLRLN 100
Query: 224 FNEPLHATAXIFGGDRCDIS 283
+ EP+H ++ +R D S
Sbjct: 101 WGEPMHWHLDMYNRNRVDTS 120
>AL133352-3|CAH73563.1| 186|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 beta subcomplex, 8, 19kDa protein.
Length = 186
Score = 102 bits (244), Expect = 7e-22
Identities = 45/80 (56%), Positives = 56/80 (70%), Gaps = 1/80 (1%)
Frame = +2
Query: 47 YPKTPEERAAAAKKYGMTVXEYTPYPED-MGYGDYPKLPDIGEDSKDPHYPYDNPELXRN 223
YP+TPEERAAAAKKY M V +Y PYP+D MGYGDYPKLPD + +DP Y +D P L N
Sbjct: 41 YPRTPEERAAAAKKYNMRVEDYEPYPDDGMGYGDYPKLPDRSQHERDPWYSWDQPGLRLN 100
Query: 224 FNEPLHATAXIFGGDRCDIS 283
+ EP+H ++ +R D S
Sbjct: 101 WGEPMHWHLDMYNRNRVDTS 120
>AL133352-2|CAH73562.1| 155|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 beta subcomplex, 8, 19kDa protein.
Length = 155
Score = 102 bits (244), Expect = 7e-22
Identities = 45/80 (56%), Positives = 56/80 (70%), Gaps = 1/80 (1%)
Frame = +2
Query: 47 YPKTPEERAAAAKKYGMTVXEYTPYPED-MGYGDYPKLPDIGEDSKDPHYPYDNPELXRN 223
YP+TPEERAAAAKKY M V +Y PYP+D MGYGDYPKLPD + +DP Y +D P L N
Sbjct: 10 YPRTPEERAAAAKKYNMRVEDYEPYPDDGMGYGDYPKLPDRSQHERDPWYSWDQPGLRLN 69
Query: 224 FNEPLHATAXIFGGDRCDIS 283
+ EP+H ++ +R D S
Sbjct: 70 WGEPMHWHLDMYNRNRVDTS 89
>AF115968-1|AAP97239.1| 186|Homo sapiens NADH:ubiquinone
oxidoreductase ASHI subunit protein.
Length = 186
Score = 102 bits (244), Expect = 7e-22
Identities = 45/80 (56%), Positives = 56/80 (70%), Gaps = 1/80 (1%)
Frame = +2
Query: 47 YPKTPEERAAAAKKYGMTVXEYTPYPED-MGYGDYPKLPDIGEDSKDPHYPYDNPELXRN 223
YP+TPEERAAAAKKY M V +Y PYP+D MGYGDYPKLPD + +DP Y +D P L N
Sbjct: 41 YPRTPEERAAAAKKYNMRVEDYEPYPDDGMGYGDYPKLPDRSQHERDPWYSWDQPGLRLN 100
Query: 224 FNEPLHATAXIFGGDRCDIS 283
+ EP+H ++ +R D S
Sbjct: 101 WGEPMHWHLDMYNRNRVDTS 120
>AF044958-1|AAD05422.1| 186|Homo sapiens NADH:ubiquinone
oxidoreductase ASHI subunit protein.
Length = 186
Score = 102 bits (244), Expect = 7e-22
Identities = 45/80 (56%), Positives = 56/80 (70%), Gaps = 1/80 (1%)
Frame = +2
Query: 47 YPKTPEERAAAAKKYGMTVXEYTPYPED-MGYGDYPKLPDIGEDSKDPHYPYDNPELXRN 223
YP+TPEERAAAAKKY M V +Y PYP+D MGYGDYPKLPD + +DP Y +D P L N
Sbjct: 41 YPRTPEERAAAAKKYNMRVEDYEPYPDDGMGYGDYPKLPDRSQHERDPWYSWDQPGLRLN 100
Query: 224 FNEPLHATAXIFGGDRCDIS 283
+ EP+H ++ +R D S
Sbjct: 101 WGEPMHWHLDMYNRNRVDTS 120
>CR533490-1|CAG38521.1| 186|Homo sapiens NDUFB8 protein.
Length = 186
Score = 99 bits (238), Expect = 4e-21
Identities = 44/80 (55%), Positives = 55/80 (68%), Gaps = 1/80 (1%)
Frame = +2
Query: 47 YPKTPEERAAAAKKYGMTVXEYTPYPED-MGYGDYPKLPDIGEDSKDPHYPYDNPELXRN 223
YP+ PEERAAAAKKY M V +Y PYP+D MGYGDYPKLPD + +DP Y +D P L N
Sbjct: 41 YPRIPEERAAAAKKYNMRVEDYEPYPDDGMGYGDYPKLPDRSQHERDPWYSWDQPGLRLN 100
Query: 224 FNEPLHATAXIFGGDRCDIS 283
+ EP+H ++ +R D S
Sbjct: 101 WGEPMHWHLDMYNRNRVDTS 120
>Y18944-1|CAB46274.1| 43|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 beta subcomplex, 8 protein.
Length = 43
Score = 52.4 bits (120), Expect = 8e-07
Identities = 21/28 (75%), Positives = 24/28 (85%)
Frame = +2
Query: 47 YPKTPEERAAAAKKYGMTVXEYTPYPED 130
YP+TPEERAAAAKKY M V +Y PYP+D
Sbjct: 13 YPRTPEERAAAAKKYNMRVEDYEPYPDD 40
>AK126865-1|BAC86728.1| 131|Homo sapiens protein ( Homo sapiens
cDNA FLJ44917 fis, clone BRAMY3010603. ).
Length = 131
Score = 31.1 bits (67), Expect = 2.0
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 5/62 (8%)
Frame = +2
Query: 50 PKTPEERAAAAKKYGMTVXEYTPYPEDMGYGDYPKLPDIGEDSKDP--HY---PYDNPEL 214
P TP+ R + + + + PED G G P+ P++ SKDP H+ P +P++
Sbjct: 56 PPTPQRRCSQGEGRRVLELQLPRVPEDPGLGPAPQ-PEVPRASKDPENHHLTGPQSSPKI 114
Query: 215 XR 220
R
Sbjct: 115 PR 116
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,081,491
Number of Sequences: 237096
Number of extensions: 1082923
Number of successful extensions: 1944
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1874
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1932
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4099895856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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