Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_F10
(471 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032644-3|CAA21668.1| 215|Caenorhabditis elegans Hypothetical ... 46 1e-05
AL032644-2|CAA21667.1| 199|Caenorhabditis elegans Hypothetical ... 46 1e-05
U53341-1|AAC69110.3| 727|Caenorhabditis elegans Hypothetical pr... 29 1.3
Z92829-7|CAB07347.1| 284|Caenorhabditis elegans Hypothetical pr... 29 1.7
U55374-7|AAP82641.1| 286|Caenorhabditis elegans Uncoordinated p... 28 2.9
U55374-6|AAM69092.1| 1926|Caenorhabditis elegans Uncoordinated p... 28 2.9
U55374-5|AAP82640.2| 2027|Caenorhabditis elegans Uncoordinated p... 28 2.9
AY264781-1|AAP13107.1| 2027|Caenorhabditis elegans high voltage ... 28 2.9
Z32683-13|CAA83630.1| 386|Caenorhabditis elegans Hypothetical p... 27 9.0
>AL032644-3|CAA21668.1| 215|Caenorhabditis elegans Hypothetical
protein Y51H1A.3b protein.
Length = 215
Score = 46.0 bits (104), Expect = 1e-05
Identities = 28/77 (36%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Frame = +2
Query: 50 PKTPEERAAAAKKYGMTVXEYTPYPED---MGYGDYPKLPDIGEDSKDPHYPYDNPELXR 220
P EER AAA KYG+ +Y +D GDYP L I D KDP+ + + + R
Sbjct: 60 PTNEEERRAAAVKYGLRPEDYQSMDKDDVIKFAGDYPDLGVITYDHKDPYEAWTDRQNRR 119
Query: 221 NFNEPLHATAXIFGGDR 271
N+ E + + GDR
Sbjct: 120 NWGELVPIDMMRYRGDR 136
>AL032644-2|CAA21667.1| 199|Caenorhabditis elegans Hypothetical
protein Y51H1A.3a protein.
Length = 199
Score = 46.0 bits (104), Expect = 1e-05
Identities = 28/77 (36%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Frame = +2
Query: 50 PKTPEERAAAAKKYGMTVXEYTPYPED---MGYGDYPKLPDIGEDSKDPHYPYDNPELXR 220
P EER AAA KYG+ +Y +D GDYP L I D KDP+ + + + R
Sbjct: 44 PTNEEERRAAAVKYGLRPEDYQSMDKDDVIKFAGDYPDLGVITYDHKDPYEAWTDRQNRR 103
Query: 221 NFNEPLHATAXIFGGDR 271
N+ E + + GDR
Sbjct: 104 NWGELVPIDMMRYRGDR 120
>U53341-1|AAC69110.3| 727|Caenorhabditis elegans Hypothetical
protein F49E10.5 protein.
Length = 727
Score = 29.5 bits (63), Expect = 1.3
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +2
Query: 146 YPKLPDIGEDSKDPHYPYDNPEL 214
+P LP+ S PH+PY NP L
Sbjct: 530 FPTLPNFPPMSMSPHFPYPNPLL 552
>Z92829-7|CAB07347.1| 284|Caenorhabditis elegans Hypothetical
protein F10A3.11 protein.
Length = 284
Score = 29.1 bits (62), Expect = 1.7
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +2
Query: 8 YESLELPVTXLALYPKTPEERAAAAKKYGMTVXEYTPY 121
+ES+ P + +Y ++ E+R AAK+YG V Y Y
Sbjct: 176 FESITGPFQPILVYRQSSEDRTRAAKEYG-DVGNYQSY 212
>U55374-7|AAP82641.1| 286|Caenorhabditis elegans Uncoordinated
protein 2, isoform d protein.
Length = 286
Score = 28.3 bits (60), Expect = 2.9
Identities = 13/44 (29%), Positives = 19/44 (43%), Gaps = 3/44 (6%)
Frame = -2
Query: 230 H*NSXSIPGYHKDNEDPWSPHQYQVA---SDNHHSPYLQDREYT 108
H S P YH+D + PH Q + +HH Y +Y+
Sbjct: 50 HSRSSHDPQYHQDQQQQQQPHHQQHSQHLQHSHHKTYQNHNQYS 93
>U55374-6|AAM69092.1| 1926|Caenorhabditis elegans Uncoordinated
protein 2, isoform c protein.
Length = 1926
Score = 28.3 bits (60), Expect = 2.9
Identities = 13/44 (29%), Positives = 19/44 (43%), Gaps = 3/44 (6%)
Frame = -2
Query: 230 H*NSXSIPGYHKDNEDPWSPHQYQVA---SDNHHSPYLQDREYT 108
H S P YH+D + PH Q + +HH Y +Y+
Sbjct: 1690 HSRSSHDPQYHQDQQQQQQPHHQQHSQHLQHSHHKTYQNHNQYS 1733
>U55374-5|AAP82640.2| 2027|Caenorhabditis elegans Uncoordinated
protein 2, isoform b protein.
Length = 2027
Score = 28.3 bits (60), Expect = 2.9
Identities = 13/44 (29%), Positives = 19/44 (43%), Gaps = 3/44 (6%)
Frame = -2
Query: 230 H*NSXSIPGYHKDNEDPWSPHQYQVA---SDNHHSPYLQDREYT 108
H S P YH+D + PH Q + +HH Y +Y+
Sbjct: 1791 HSRSSHDPQYHQDQQQQQQPHHQQHSQHLQHSHHKTYQNHNQYS 1834
>AY264781-1|AAP13107.1| 2027|Caenorhabditis elegans high voltage
activated calciumchannel alpha-1 subunit protein.
Length = 2027
Score = 28.3 bits (60), Expect = 2.9
Identities = 13/44 (29%), Positives = 19/44 (43%), Gaps = 3/44 (6%)
Frame = -2
Query: 230 H*NSXSIPGYHKDNEDPWSPHQYQVA---SDNHHSPYLQDREYT 108
H S P YH+D + PH Q + +HH Y +Y+
Sbjct: 1791 HSRSSHDPQYHQDQQQQQQPHHQQHSQHLQHSHHKTYQNHNQYS 1834
>Z32683-13|CAA83630.1| 386|Caenorhabditis elegans Hypothetical
protein R07E5.10a protein.
Length = 386
Score = 26.6 bits (56), Expect = 9.0
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = +2
Query: 116 PYPEDMGYGDYPKLPDIGEDSKDPHYPYDNPELXR 220
P D D P PD+ D DP P D P L R
Sbjct: 113 PRANDYYSFDGPMDPDLDGDVADPRAPADGPGLCR 147
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,401,890
Number of Sequences: 27780
Number of extensions: 169806
Number of successful extensions: 392
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 386
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 390
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 850313440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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