Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_F10
         (471 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g78240.1 68414.m09118 dehydration-responsive protein-related ...    33   0.13 
At2g38440.1 68415.m04721 expressed protein                             31   0.39 
At1g73965.1 68414.m08566 CLE13 CLAVATA3/ESR-Related 13 (CLE13)         28   3.7  
At4g26750.1 68417.m03854 hydroxyproline-rich glycoprotein family...    27   4.8  
At1g01440.1 68414.m00059 extra-large G-protein-related weak simi...    27   4.8  
At1g12130.1 68414.m01405 flavin-containing monooxygenase family ...    27   6.4  
At3g25740.1 68416.m03205 metallopeptidase M24 family protein sim...    27   8.5  
At2g01460.1 68415.m00069 phosphoribulokinase/uridine kinase fami...    27   8.5  
At1g56340.1 68414.m06476 calreticulin 1 (CRT1) identical to calr...    27   8.5  

>At1g78240.1 68414.m09118 dehydration-responsive protein-related
           similar to early-responsive to dehydration stress ERD3
           protein [Arabidopsis thaliana] GI:15320410; contains
           Pfam profile PF03141: Putative methyltransferase
          Length = 684

 Score = 32.7 bits (71), Expect = 0.13
 Identities = 18/54 (33%), Positives = 27/54 (50%)
 Frame = +2

Query: 32  TXLALYPKTPEERAAAAKKYGMTVXEYTPYPEDMGYGDYPKLPDIGEDSKDPHY 193
           T L+LY   PE     A+ + +TV EY      + + D+PK P  G++   P Y
Sbjct: 478 TELSLYGLHPEVLGEDAENWKITVREYWSLLSPLIFSDHPKRP--GDEDPSPPY 529


>At2g38440.1 68415.m04721 expressed protein 
          Length = 1399

 Score = 31.1 bits (67), Expect = 0.39
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = -2

Query: 200  HKDNEDPWSPHQYQVASDNHHSPYLQDREYTPXQS 96
            H+D +D    H+ Q +SD+HH P  + +  TP QS
Sbjct: 1204 HEDFKDDADVHESQSSSDDHHCP--ETKSLTPTQS 1236


>At1g73965.1 68414.m08566 CLE13 CLAVATA3/ESR-Related 13 (CLE13)
          Length = 107

 Score = 27.9 bits (59), Expect = 3.7
 Identities = 21/71 (29%), Positives = 33/71 (46%)
 Frame = +2

Query: 29  VTXLALYPKTPEERAAAAKKYGMTVXEYTPYPEDMGYGDYPKLPDIGEDSKDPHYPYDNP 208
           +T  ALY + P  RA A K +     ++TP+ +D+   ++ K    G    DP Y  +  
Sbjct: 43  ITLPALYYR-PGRRALAVKTF-----DFTPFLKDLRRSNHRKALPAGGSEIDPRYGVEK- 95

Query: 209 ELXRNFNEPLH 241
            L  +   PLH
Sbjct: 96  RLVPSGPNPLH 106


>At4g26750.1 68417.m03854 hydroxyproline-rich glycoprotein family
           protein
          Length = 421

 Score = 27.5 bits (58), Expect = 4.8
 Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 3/37 (8%)
 Frame = +2

Query: 110 YTPYPEDM-GYGDYPKLPDIGEDSKDPHYP--YDNPE 211
           + P P  +  +  YP   +    S  PHYP  Y NPE
Sbjct: 282 HEPSPNSLPNFQSYPSFSESSLPSTSPHYPSHYQNPE 318


>At1g01440.1 68414.m00059 extra-large G-protein-related weak
           similarity to extra-large G-protein  (AtXLG1)
           (GI:3201682) [Arabidopsis thaliana]
          Length = 664

 Score = 27.5 bits (58), Expect = 4.8
 Identities = 15/34 (44%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
 Frame = +2

Query: 110 YTPYPEDMGYGDYPKLPDIGEDSKDPHYP-YDNP 208
           Y PYPE   YG YP        S  PH P Y +P
Sbjct: 128 YNPYPEPFPYGMYPTA------SNQPHVPAYRDP 155


>At1g12130.1 68414.m01405 flavin-containing monooxygenase family
           protein / FMO family protein contains similarity to
           flavin-containing monooxygenase 2 (FMO2) from Homo
           sapiens [GI:1834493]; contains Pfam profile PF00743
           Flavin-binding monooxygenase-like
          Length = 470

 Score = 27.1 bits (57), Expect = 6.4
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +2

Query: 125 EDMGYGDYPKLPDIGEDSKDPHYPYDNPELXR 220
           E MGY D+P +    ++S+DP    D+ E+ R
Sbjct: 84  ECMGYSDFPFVTRPDDESRDPRRYPDHREVMR 115


>At3g25740.1 68416.m03205 metallopeptidase M24 family protein
           similar to SP|O33343 Methionine aminopeptidase (EC
           3.4.11.18) (Peptidase M) {Mycobacterium tuberculosis};
           contains Pfam profile PF00557: metallopeptidase family
           M24
          Length = 344

 Score = 26.6 bits (56), Expect = 8.5
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +2

Query: 101 VXEYTPYPEDMGYGDYPK 154
           V E+  YP  +GYG +PK
Sbjct: 143 VIEFGAYPSPLGYGGFPK 160


>At2g01460.1 68415.m00069 phosphoribulokinase/uridine kinase family
           protein contains Pfam profile PF00485:
           Phosphoribulokinase / Uridine kinase family
          Length = 723

 Score = 26.6 bits (56), Expect = 8.5
 Identities = 14/25 (56%), Positives = 19/25 (76%), Gaps = 2/25 (8%)
 Frame = -3

Query: 289 PYANVTAI--STKYXCSSVQRFIEI 221
           PY ++ +I  STK+ CSSVQ FI+I
Sbjct: 649 PYQDILSILDSTKF-CSSVQNFIDI 672


>At1g56340.1 68414.m06476 calreticulin 1 (CRT1) identical to
           calreticulin (crt1) GI:2052379 [Arabidopsis thaliana]
          Length = 425

 Score = 26.6 bits (56), Expect = 8.5
 Identities = 22/60 (36%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
 Frame = +2

Query: 44  LYPKTPEERAAAAKKYGMTVXEYTPYPED---MGYGDYPK-LPDIGEDSKDPHYPYDNPE 211
           L P    +  +A K       EY P PED    GY D PK +PD   D+K P   +D+ E
Sbjct: 205 LLPAKKIKDPSAKKPEDWDDKEYIPDPEDTKPAGYDDIPKEIPD--TDAKKPE-DWDDEE 261


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,926,344
Number of Sequences: 28952
Number of extensions: 162846
Number of successful extensions: 390
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 385
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 390
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 801831960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)