Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_F09
         (450 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_05_0108 + 22451440-22451541,22452228-22452427,22452979-22453018     84   6e-17
01_06_1294 - 36076524-36076554,36076821-36076891,36077221-360772...    84   6e-17
07_03_0078 - 13147741-13148913                                         30   0.75 
09_01_0024 + 438288-438542,439020-439069,440096-440351                 29   2.3  
11_02_0038 - 7631462-7634428,7635975-7636250                           27   5.3  
03_05_0169 + 21474655-21474771,21474879-21474971,21475553-214756...    27   7.0  
11_06_0474 - 24037091-24037543,24037769-24037786                       27   9.2  
10_01_0206 - 2206359-2209142                                           27   9.2  

>05_05_0108 + 22451440-22451541,22452228-22452427,22452979-22453018
          Length = 113

 Score = 83.8 bits (198), Expect = 6e-17
 Identities = 40/58 (68%), Positives = 47/58 (81%)
 Frame = +1

Query: 160 RDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMR 333
           R+L+REV G A YEKR  ELLKV KDKRALK  KR+LGTH RAK+KREE++ VL +MR
Sbjct: 44  RNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMAGVLRKMR 101


>01_06_1294 -
           36076524-36076554,36076821-36076891,36077221-36077275,
           36077363-36077562,36078614-36078715
          Length = 152

 Score = 83.8 bits (198), Expect = 6e-17
 Identities = 40/58 (68%), Positives = 47/58 (81%)
 Frame = +1

Query: 160 RDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMR 333
           R L+REVVG A YEKR  ELLKV KDKRALK  KR+LGTH RAK+KREE++ V+ +MR
Sbjct: 44  RGLIREVVGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMAGVIRKMR 101


>07_03_0078 - 13147741-13148913
          Length = 390

 Score = 30.3 bits (65), Expect = 0.75
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = -3

Query: 118 AGLILMALSVIPLRPADILVVLWPF 44
           AGL+  AL VIP  P  + +V WPF
Sbjct: 71  AGLLYFALVVIPALPGVLRLVAWPF 95


>09_01_0024 + 438288-438542,439020-439069,440096-440351
          Length = 186

 Score = 28.7 bits (61), Expect = 2.3
 Identities = 14/42 (33%), Positives = 26/42 (61%)
 Frame = +1

Query: 190 AQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSN 315
           A++E R  E LK ++++ A K LKR+     + ++KR + +N
Sbjct: 122 AEFELRREERLKEAEERTAKKRLKRQKKKQRKKEKKRSKTNN 163


>11_02_0038 - 7631462-7634428,7635975-7636250
          Length = 1080

 Score = 27.5 bits (58), Expect = 5.3
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +1

Query: 235 DKRALKFLKRRLGTHIRAKRKREELSNV 318
           DK+ LKFL  R  TH +     E+++N+
Sbjct: 791 DKKHLKFLNLRCTTHTKESYTMEDITNI 818


>03_05_0169 +
           21474655-21474771,21474879-21474971,21475553-21475642,
           21475728-21475811,21476088-21476252,21476995-21477182,
           21477363-21477435,21477766-21477819,21478019-21478276,
           21478891-21479097,21479293-21479396,21479809-21479953,
           21480108-21480242,21480610-21480783
          Length = 628

 Score = 27.1 bits (57), Expect = 7.0
 Identities = 19/65 (29%), Positives = 38/65 (58%)
 Frame = +1

Query: 118 LD*RVFKRNTPSLSRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRK 297
           LD +V + +  SL+ D+ +E+      +    +LLK +KDK   + +++ L T  + +RK
Sbjct: 267 LDAQVLRADNSSLAGDIRKEM------KVLNSKLLK-AKDKNTKRDIRKELRTLAKEERK 319

Query: 298 REELS 312
           R++L+
Sbjct: 320 RQQLA 324


>11_06_0474 - 24037091-24037543,24037769-24037786
          Length = 156

 Score = 26.6 bits (56), Expect = 9.2
 Identities = 15/49 (30%), Positives = 26/49 (53%)
 Frame = -2

Query: 236 SFDTLSNSIALFSY*ACPTTSRTKSRDKLGVFRLKTL*SSWPNSDGFVC 90
           S+DT+ N+   F++  C T S+  +R  LGV     +  + P ++ F C
Sbjct: 106 SYDTVRNNCFDFAF-YCKTGSKNLNRTVLGVVTAPIIAVAEPIAEAFSC 153


>10_01_0206 - 2206359-2209142
          Length = 927

 Score = 26.6 bits (56), Expect = 9.2
 Identities = 11/38 (28%), Positives = 18/38 (47%)
 Frame = -2

Query: 182 TTSRTKSRDKLGVFRLKTL*SSWPNSDGFVCDTLAASG 69
           +TSR+   D +G+   +    +W   DG  C T+   G
Sbjct: 168 STSRSICEDLVGIEENRDTLFNWMREDGMACSTIVLHG 205


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,631,790
Number of Sequences: 37544
Number of extensions: 173277
Number of successful extensions: 438
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 430
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 438
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 871620292
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)