Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_F08
         (651 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0300 + 22095396-22096145,22096261-22096344,22097062-220973...    40   0.002
03_06_0365 - 33399422-33399925,33400470-33400583,33400762-334009...    39   0.004
06_03_0674 + 23422004-23422552,23423295-23423369,23424360-234244...    36   0.037
05_01_0500 - 4171090-4171191,4171989-4172061,4172376-4172701,417...    34   0.11 
07_01_0725 - 5532803-5533324,5533631-5533657,5534285-5534398,553...    31   0.60 
05_04_0382 + 20796567-20796810,20796894-20797750                       31   1.1  
08_01_0099 + 709377-709493,710055-710099,710482-710553,712413-71...    30   1.8  
01_01_0612 + 4565422-4565481,4565597-4565671,4565760-4566332,456...    29   3.2  
10_07_0059 + 12475452-12475785,12475889-12476523                       27   9.8  
04_04_0824 - 28399144-28399385,28400193-28400312,28400422-284004...    27   9.8  
02_05_1014 + 33510108-33510471,33510857-33511362                       27   9.8  

>11_06_0300 +
           22095396-22096145,22096261-22096344,22097062-22097304,
           22098535-22098702,22098895-22099008,22099378-22099890
          Length = 623

 Score = 39.9 bits (89), Expect = 0.002
 Identities = 17/51 (33%), Positives = 30/51 (58%)
 Frame = +3

Query: 495 DETEIFXSTISSGINFDKFDHIAXKVSGENPPRPIESFETANLXKYVLHNV 647
           DE E+F +  ++GINFD ++ I  + SG   P P+ +F   +L + +  N+
Sbjct: 120 DEPEVFDAHQNTGINFDAYEDIPVETSGREVPPPVGTFAEIDLGQALNDNI 170


>03_06_0365 -
           33399422-33399925,33400470-33400583,33400762-33400929,
           33401305-33401547,33402148-33402231,33402323-33403098,
           33404423-33404636
          Length = 700

 Score = 38.7 bits (86), Expect = 0.004
 Identities = 16/51 (31%), Positives = 29/51 (56%)
 Frame = +3

Query: 495 DETEIFXSTISSGINFDKFDHIAXKVSGENPPRPIESFETANLXKYVLHNV 647
           + TE+   T ++GINFD ++ I  + SG + P P+ +F   +L   +  N+
Sbjct: 202 EATEVDFDTANTGINFDAYEDIPVETSGHDVPPPVNTFAEIDLGDALNENI 252


>06_03_0674 +
           23422004-23422552,23423295-23423369,23424360-23424443,
           23424749-23424991,23425348-23425515,23425608-23425727,
           23426372-23427016
          Length = 627

 Score = 35.5 bits (78), Expect = 0.037
 Identities = 18/35 (51%), Positives = 23/35 (65%)
 Frame = +3

Query: 543 DKFDHIAXKVSGENPPRPIESFETANLXKYVLHNV 647
           DK+D I  +VSGE+ P P + FE A L + VL NV
Sbjct: 66  DKYD-IPVEVSGEDVPPPADGFEAAGLVEAVLRNV 99


>05_01_0500 -
           4171090-4171191,4171989-4172061,4172376-4172701,
           4173164-4173555,4174521-4174853,4177118-4177209,
           4178052-4178111,4178760-4178903,4180142-4180213,
           4180345-4180510,4180776-4180923
          Length = 635

 Score = 33.9 bits (74), Expect = 0.11
 Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = -2

Query: 101 HNSFTGIIPVII-HYNGIFYFQLDFDNVKSPKQI 3
           +N FTG IP I+ H  GIF   L F+N+  P  +
Sbjct: 157 YNHFTGTIPSILGHSKGIFLMDLSFNNLSGPAPV 190


>07_01_0725 -
           5532803-5533324,5533631-5533657,5534285-5534398,
           5534564-5534731,5535951-5536193,5537178-5537261,
           5537357-5538117,5539637-5539730,5540633-5540899,
           5541311-5541316,5542538-5542657
          Length = 801

 Score = 31.5 bits (68), Expect = 0.60
 Identities = 14/56 (25%), Positives = 28/56 (50%)
 Frame = +3

Query: 480 PEPTNDETEIFXSTISSGINFDKFDHIAXKVSGENPPRPIESFETANLXKYVLHNV 647
           P   ++  E+     ++GINF+ ++ I  + SG + P P  +F   +L   +  N+
Sbjct: 283 PFANSEAAEVDFEGENTGINFEAYEDIPVETSGHDVPPPANTFAEIDLGDALNENI 338


>05_04_0382 + 20796567-20796810,20796894-20797750
          Length = 366

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = +3

Query: 96  VVVPPPPLQNHDSVXEGHSLSRGRGFPSFNEDDEKEN 206
           V  PPPP+    +V  G  +SRG G P +NE    +N
Sbjct: 325 VAAPPPPMMPV-AVRSGRPVSRGGGAPPYNEMHTPKN 360


>08_01_0099 +
           709377-709493,710055-710099,710482-710553,712413-712484,
           712763-712839,713040-713169,713250-713360,713443-713568
          Length = 249

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = +3

Query: 456 NKPVTYVPPEPTNDETEIFXSTISSGINFDKFDHIAXKVS 575
           + P  YVP E  N+  E+F +   S I  +  DH+  K++
Sbjct: 142 DNPPAYVPEEQLNELEEVFRNARKSDIPTEVPDHLCCKIT 181


>01_01_0612 +
           4565422-4565481,4565597-4565671,4565760-4566332,
           4566438-4566551,4566676-4567377
          Length = 507

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
 Frame = +3

Query: 57  IVMDDDWDDSCEAVVVPPPPLQNHDSVXEGHSLSRGRGFPSF-NEDDEKENGYGE 218
           +  DDD D       +PP P+ N  S   G +   G G P+  N+     +G G+
Sbjct: 155 VASDDDDDKQASRRALPPMPVLNLSSDSSGDAAGAGAGEPTQPNKASRSSSGGGD 209


>10_07_0059 + 12475452-12475785,12475889-12476523
          Length = 322

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 16/40 (40%), Positives = 20/40 (50%)
 Frame = +3

Query: 51  NTIVMDDDWDDSCEAVVVPPPPLQNHDSVXEGHSLSRGRG 170
           + +V DDD +D    VV+PPPP        E H   R RG
Sbjct: 84  DVVVDDDDSEDG--VVVLPPPPPPPPVIPHERHGARRFRG 121


>04_04_0824 -
           28399144-28399385,28400193-28400312,28400422-28400453,
           28400531-28400625,28400713-28400786,28400883-28401018,
           28401096-28401333,28401508-28401555,28401593-28401780,
           28401862-28401983,28402061-28402226,28402321-28402443,
           28403068-28403139,28403244-28403351,28404212-28404328,
           28404458-28404596,28404702-28404808,28404904-28405013,
           28405141-28405274,28405348-28405497,28405571-28405791,
           28405868-28406677,28410261-28410473
          Length = 1254

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 14/26 (53%), Positives = 16/26 (61%)
 Frame = +3

Query: 84  SCEAVVVPPPPLQNHDSVXEGHSLSR 161
           S EA V+PPP L+ HDS  E   L R
Sbjct: 693 SVEARVLPPPRLKYHDSGREKDVLPR 718


>02_05_1014 + 33510108-33510471,33510857-33511362
          Length = 289

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +3

Query: 414 NDYEDNEIXENGETNKPVTYVPPEPTNDE 500
           N+   N   +NG  ++P  YVPP+P   E
Sbjct: 172 NNIPPNSGGDNGGGSRPGKYVPPKPRESE 200


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,776,816
Number of Sequences: 37544
Number of extensions: 193571
Number of successful extensions: 765
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 727
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 757
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)