Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_F07
         (514 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0113 + 897970-898038,898148-898271,898811-898896,898996-89...    52   4e-07
01_05_0277 + 20310426-20312216                                         29   2.9  
07_01_0362 - 2667031-2667090,2667182-2667426,2667749-2669471,266...    27   6.7  
06_01_0025 - 244068-244177,244279-244333,244500-244527,244621-24...    27   6.7  

>08_01_0113 +
           897970-898038,898148-898271,898811-898896,898996-899049
          Length = 110

 Score = 51.6 bits (118), Expect = 4e-07
 Identities = 21/34 (61%), Positives = 27/34 (79%)
 Frame = +2

Query: 134 DDDVAVTGEKISTILKAAAVXVEPYWPGLFAKAL 235
           DD + +T EKI+T++KAA + VE YWPGLFAK L
Sbjct: 17  DDGIPITSEKIATLVKAANIKVEAYWPGLFAKLL 50


>01_05_0277 + 20310426-20312216
          Length = 596

 Score = 28.7 bits (61), Expect = 2.9
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +2

Query: 158 EKISTILKAAAVXVEPYWPGLFAKALPRH 244
           + + T+L+++A    P  PGL  KAL RH
Sbjct: 125 DALPTLLRSSATAPHPSLPGLLVKALLRH 153


>07_01_0362 -
           2667031-2667090,2667182-2667426,2667749-2669471,
           2669578-2669921,2670544-2670667,2671350-2671599,
           2672486-2672571
          Length = 943

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
 Frame = +2

Query: 86  CQKLNXH-VFTLLSSWLDDDVAVTGEKISTILKAAAVXVEPYWPG 217
           C+    H +FT L+SW   +VA  GE  +  L A+ +   P W G
Sbjct: 134 CESCGAHLIFTALTSWSPAEVANAGEAFAEQLDASHLGDCP-WRG 177


>06_01_0025 -
           244068-244177,244279-244333,244500-244527,244621-244691,
           244829-244926,245069-245186,245573-245636,245744-245808,
           245893-245928,246255-246311,246422-246691
          Length = 323

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = -3

Query: 236 ARLWRTDLANMALHXQPPLSRWWKFSHQLRQH 141
           A +W+TD      H +  L   W F H+LRQH
Sbjct: 232 ANVWQTDCIARVSH-EDGLVVGWIFLHELRQH 262


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,505,194
Number of Sequences: 37544
Number of extensions: 177945
Number of successful extensions: 442
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 439
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 441
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1106928780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)