Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_F07
         (514 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y00504-1|CAA68557.1|  112|Drosophila melanogaster protein ( Dros...    68   9e-12
S62170-1|AAB26902.1|  112|Drosophila melanogaster acidic ribosom...    68   9e-12
AY069125-1|AAL39270.1|  112|Drosophila melanogaster GH13422p pro...    68   9e-12
AE014134-102|AAF51499.1|  112|Drosophila melanogaster CG4087-PA ...    68   9e-12
AE014134-11|AAF51568.2| 2833|Drosophila melanogaster CG31973-PB,...    28   8.5  

>Y00504-1|CAA68557.1|  112|Drosophila melanogaster protein (
           Drosophila melanogastermRNA for A-type ribosomal protein
           rp21C. ).
          Length = 112

 Score = 67.7 bits (158), Expect = 9e-12
 Identities = 31/35 (88%), Positives = 33/35 (94%)
 Frame = +2

Query: 131 LDDDVAVTGEKISTILKAAAVXVEPYWPGLFAKAL 235
           +DDDVAVTGEKI+TILKAA V VEPYWPGLFAKAL
Sbjct: 17  VDDDVAVTGEKINTILKAANVEVEPYWPGLFAKAL 51



 Score = 30.7 bits (66), Expect = 1.2
 Identities = 13/18 (72%), Positives = 15/18 (83%)
 Frame = +3

Query: 228 KPCQGINVRDLITNIGSG 281
           K  + INV+DLITNIGSG
Sbjct: 49  KALEAINVKDLITNIGSG 66


>S62170-1|AAB26902.1|  112|Drosophila melanogaster acidic ribosomal
           protein rpA2 protein.
          Length = 112

 Score = 67.7 bits (158), Expect = 9e-12
 Identities = 31/35 (88%), Positives = 33/35 (94%)
 Frame = +2

Query: 131 LDDDVAVTGEKISTILKAAAVXVEPYWPGLFAKAL 235
           +DDDVAVTGEKI+TILKAA V VEPYWPGLFAKAL
Sbjct: 17  VDDDVAVTGEKINTILKAANVEVEPYWPGLFAKAL 51



 Score = 33.1 bits (72), Expect = 0.23
 Identities = 14/18 (77%), Positives = 16/18 (88%)
 Frame = +3

Query: 228 KPCQGINVRDLITNIGSG 281
           K  +GINV+DLITNIGSG
Sbjct: 49  KALEGINVKDLITNIGSG 66


>AY069125-1|AAL39270.1|  112|Drosophila melanogaster GH13422p
           protein.
          Length = 112

 Score = 67.7 bits (158), Expect = 9e-12
 Identities = 31/35 (88%), Positives = 33/35 (94%)
 Frame = +2

Query: 131 LDDDVAVTGEKISTILKAAAVXVEPYWPGLFAKAL 235
           +DDDVAVTGEKI+TILKAA V VEPYWPGLFAKAL
Sbjct: 17  VDDDVAVTGEKINTILKAANVEVEPYWPGLFAKAL 51



 Score = 33.1 bits (72), Expect = 0.23
 Identities = 14/18 (77%), Positives = 16/18 (88%)
 Frame = +3

Query: 228 KPCQGINVRDLITNIGSG 281
           K  +GINV+DLITNIGSG
Sbjct: 49  KALEGINVKDLITNIGSG 66


>AE014134-102|AAF51499.1|  112|Drosophila melanogaster CG4087-PA
           protein.
          Length = 112

 Score = 67.7 bits (158), Expect = 9e-12
 Identities = 31/35 (88%), Positives = 33/35 (94%)
 Frame = +2

Query: 131 LDDDVAVTGEKISTILKAAAVXVEPYWPGLFAKAL 235
           +DDDVAVTGEKI+TILKAA V VEPYWPGLFAKAL
Sbjct: 17  VDDDVAVTGEKINTILKAANVEVEPYWPGLFAKAL 51



 Score = 33.1 bits (72), Expect = 0.23
 Identities = 14/18 (77%), Positives = 16/18 (88%)
 Frame = +3

Query: 228 KPCQGINVRDLITNIGSG 281
           K  +GINV+DLITNIGSG
Sbjct: 49  KALEGINVKDLITNIGSG 66


>AE014134-11|AAF51568.2| 2833|Drosophila melanogaster CG31973-PB,
            isoform B protein.
          Length = 2833

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 15/40 (37%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
 Frame = -3

Query: 212  ANMALHXQPPLSRWWKFSHQLRQ-HHHQARMRAE*THXNS 96
            AN A+H   P        H+ RQ HHHQ R      + NS
Sbjct: 1835 ANPAMHFVSPFKSLENLLHEDRQHHHHQLRTTTRPRYTNS 1874


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,384,974
Number of Sequences: 53049
Number of extensions: 290819
Number of successful extensions: 728
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 708
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 727
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1867000320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)