Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_F06
         (481 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q1HQK5 Cluster: Cytochrome c oxidase polypeptide VIIC; ...    75   6e-13
UniRef50_Q1W2C6 Cluster: Putative mitochondrial cytochrome c oxi...    67   2e-10
UniRef50_Q7JW00 Cluster: LD14731p; n=7; Arthropoda|Rep: LD14731p...    58   1e-07
UniRef50_UPI00005189A2 Cluster: PREDICTED: hypothetical protein;...    55   7e-07
UniRef50_P15954 Cluster: Cytochrome c oxidase subunit 7C, mitoch...    47   3e-04
UniRef50_A6EE33 Cluster: Putative uncharacterized protein; n=1; ...    32   7.7  
UniRef50_A7RPT2 Cluster: Predicted protein; n=1; Nematostella ve...    32   7.7  

>UniRef50_Q1HQK5 Cluster: Cytochrome c oxidase polypeptide VIIC;
           n=4; Endopterygota|Rep: Cytochrome c oxidase polypeptide
           VIIC - Aedes aegypti (Yellowfever mosquito)
          Length = 67

 Score = 75.4 bits (177), Expect = 6e-13
 Identities = 33/55 (60%), Positives = 42/55 (76%), Gaps = 1/55 (1%)
 Frame = +1

Query: 151 LGRNVVTNFVR-NHSNGGIPGENLPFDIHNRYKLTLYFILYAGSGLSAPYLITRH 312
           + R  +TN VR +HS+GGIPGENLPF + NRYKLT  FI++ GSGL AP+ + RH
Sbjct: 8   ISRTGMTNLVRYSHSHGGIPGENLPFSLTNRYKLTALFIVFLGSGLGAPFFVLRH 62


>UniRef50_Q1W2C6 Cluster: Putative mitochondrial cytochrome c
           oxidase polypeptide VIIc; n=1; Graphocephala
           atropunctata|Rep: Putative mitochondrial cytochrome c
           oxidase polypeptide VIIc - Graphocephala atropunctata
          Length = 65

 Score = 66.9 bits (156), Expect = 2e-10
 Identities = 27/52 (51%), Positives = 37/52 (71%)
 Frame = +1

Query: 157 RNVVTNFVRNHSNGGIPGENLPFDIHNRYKLTLYFILYAGSGLSAPYLITRH 312
           RN+ T+  R    GGIPG NLPF + N++KLT  F++Y GSG+S P+L+ RH
Sbjct: 10  RNLSTSLARRSQPGGIPGVNLPFSLDNKFKLTALFVVYFGSGMSVPFLMLRH 61


>UniRef50_Q7JW00 Cluster: LD14731p; n=7; Arthropoda|Rep: LD14731p -
           Drosophila melanogaster (Fruit fly)
          Length = 66

 Score = 57.6 bits (133), Expect = 1e-07
 Identities = 24/57 (42%), Positives = 36/57 (63%)
 Frame = +1

Query: 142 SNKLGRNVVTNFVRNHSNGGIPGENLPFDIHNRYKLTLYFILYAGSGLSAPYLITRH 312
           S+ + RN   + VR   +GG+PGENLPF + N+Y++T  F +    G  +P+LI RH
Sbjct: 5   SSVIARNFSQSMVRFSGHGGVPGENLPFGLTNKYRITALFTIGCVLGFGSPFLIVRH 61


>UniRef50_UPI00005189A2 Cluster: PREDICTED: hypothetical protein;
           n=1; Apis mellifera|Rep: PREDICTED: hypothetical protein
           - Apis mellifera
          Length = 71

 Score = 55.2 bits (127), Expect = 7e-07
 Identities = 24/43 (55%), Positives = 30/43 (69%)
 Frame = +1

Query: 184 NHSNGGIPGENLPFDIHNRYKLTLYFILYAGSGLSAPYLITRH 312
           +H   G PG NLP +I NRY LT  FIL+ GSGLS P+L+ R+
Sbjct: 25  DHGPEGYPGANLPINIQNRYVLTATFILFFGSGLSLPFLVLRY 67


>UniRef50_P15954 Cluster: Cytochrome c oxidase subunit 7C,
           mitochondrial precursor; n=46; Deuterostomia|Rep:
           Cytochrome c oxidase subunit 7C, mitochondrial precursor
           - Homo sapiens (Human)
          Length = 63

 Score = 46.8 bits (106), Expect = 3e-04
 Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
 Frame = +1

Query: 157 RNVVTNFVR-NHSNGGIPGENLPFDIHNRYKLTLYFILYAGSGLSAPYLITRH 312
           R   T+ VR +H   G PG+NLPF + N++ L     LY GS  + P+L+ RH
Sbjct: 7   RRFTTSVVRRSHYEEG-PGKNLPFSVENKWSLLAKMCLYFGSAFATPFLVVRH 58


>UniRef50_A6EE33 Cluster: Putative uncharacterized protein; n=1;
           Pedobacter sp. BAL39|Rep: Putative uncharacterized
           protein - Pedobacter sp. BAL39
          Length = 204

 Score = 31.9 bits (69), Expect = 7.7
 Identities = 17/48 (35%), Positives = 26/48 (54%)
 Frame = +1

Query: 142 SNKLGRNVVTNFVRNHSNGGIPGENLPFDIHNRYKLTLYFILYAGSGL 285
           +NKL  ++  NF+ N    G   EN+   IH  Y L L F++Y+ + L
Sbjct: 101 ANKLASHIFNNFISNWEEDGY--ENIVHGIHYMY-LNLRFVMYSAAQL 145


>UniRef50_A7RPT2 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 78

 Score = 31.9 bits (69), Expect = 7.7
 Identities = 11/35 (31%), Positives = 20/35 (57%)
 Frame = +1

Query: 205 PGENLPFDIHNRYKLTLYFILYAGSGLSAPYLITR 309
           PG N+PF   N+ +L +  + Y G+  + P++  R
Sbjct: 35  PGLNMPFQTQNKTRLLIVMVAYLGTCFALPFVAVR 69


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 398,071,417
Number of Sequences: 1657284
Number of extensions: 7315014
Number of successful extensions: 15994
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 15686
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15988
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 27290400475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)