Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_F06
         (481 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83107-7|CAB05501.2|  537|Caenorhabditis elegans Hypothetical pr...    31   0.57 
AF003384-2|AAL08040.1|  428|Caenorhabditis elegans Acyltransfera...    27   7.0  
AF003384-1|AAK71374.2|  415|Caenorhabditis elegans Acyltransfera...    27   7.0  

>Z83107-7|CAB05501.2|  537|Caenorhabditis elegans Hypothetical
           protein F32A7.6 protein.
          Length = 537

 Score = 30.7 bits (66), Expect = 0.57
 Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
 Frame = +1

Query: 154 GRNVVTN-FVRNHSNGGIPGENLPFDIHNRYKLTLYFILYAGSGLSAPY 297
           GRN   N FV    NGG+ G+N  +D +   + TL F +   SG  A Y
Sbjct: 264 GRNGKGNIFVWASGNGGVNGDNCAYDGYVSNEYTLSFGVIDASGAPAAY 312


>AF003384-2|AAL08040.1|  428|Caenorhabditis elegans
           Acyltransferase-like protein 14,isoform b protein.
          Length = 428

 Score = 27.1 bits (57), Expect = 7.0
 Identities = 23/68 (33%), Positives = 28/68 (41%), Gaps = 3/68 (4%)
 Frame = -1

Query: 226 RRVDSRQEYRR*NGFSR---NSLPHFYPVCLKCESVG*SSLRXYDSRVGITAKNKKFDFA 56
           +RV+S Q Y + NGF      +LP    V    E VG    R  DS       N K    
Sbjct: 215 KRVESSQSYGKKNGFPHLLYTTLPRMGAVQAILEEVG---PRTEDSDEPRERSNSKLKLL 271

Query: 55  NSTVGIIK 32
             TVG I+
Sbjct: 272 QDTVGAIR 279


>AF003384-1|AAK71374.2|  415|Caenorhabditis elegans
           Acyltransferase-like protein 14,isoform a protein.
          Length = 415

 Score = 27.1 bits (57), Expect = 7.0
 Identities = 23/68 (33%), Positives = 28/68 (41%), Gaps = 3/68 (4%)
 Frame = -1

Query: 226 RRVDSRQEYRR*NGFSR---NSLPHFYPVCLKCESVG*SSLRXYDSRVGITAKNKKFDFA 56
           +RV+S Q Y + NGF      +LP    V    E VG    R  DS       N K    
Sbjct: 213 KRVESSQSYGKKNGFPHLLYTTLPRMGAVQAILEEVG---PRTEDSDEPRERSNSKLKLL 269

Query: 55  NSTVGIIK 32
             TVG I+
Sbjct: 270 QDTVGAIR 277


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,421,925
Number of Sequences: 27780
Number of extensions: 183869
Number of successful extensions: 359
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 356
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 359
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 882200194
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)