BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_F04
(654 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF457565-1|AAL68795.1| 391|Anopheles gambiae TRIO protein protein. 29 0.097
L20837-1|AAA03087.1| 192|Anopheles gambiae ribosomal protein S7... 25 2.1
AF004915-1|AAB94671.1| 688|Anopheles gambiae pro-phenol oxidase... 25 2.8
EF382662-1|ABN54495.1| 178|Anopheles gambiae CPF family cuticle... 24 4.8
X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein. 23 8.4
>AF457565-1|AAL68795.1| 391|Anopheles gambiae TRIO protein protein.
Length = 391
Score = 29.5 bits (63), Expect = 0.097
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Frame = +3
Query: 270 GTIYTAAEEIEALG--GKALPCIVDVRDXKQVQKAVDEAVKKFN 395
GT+ E + L A+P +VDV+ +Q++VD+ + KFN
Sbjct: 324 GTLVQDPEYVYRLSQLAHAMPSLVDVKAHPDLQQSVDDLMAKFN 367
>L20837-1|AAA03087.1| 192|Anopheles gambiae ribosomal protein S7
protein.
Length = 192
Score = 25.0 bits (52), Expect = 2.1
Identities = 19/51 (37%), Positives = 23/51 (45%), Gaps = 4/51 (7%)
Frame = +3
Query: 258 PKLPGTIYTAAEEIEALGGKALPCIVDVRDXKQVQKA----VDEAVKKFNG 398
P+L T A E+E KA+ V V K QK V E KKF+G
Sbjct: 37 PQLRDLYITRAREVEFNNKKAIIIYVPVPKQKAFQKVQTRLVRELEKKFSG 87
>AF004915-1|AAB94671.1| 688|Anopheles gambiae pro-phenol oxidase
subunit 1 protein.
Length = 688
Score = 24.6 bits (51), Expect = 2.8
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 396 GIDILVNNASAISLTGTAQTDMKRYDLMHNI 488
GIDIL + A SLT AQ +++ HN+
Sbjct: 340 GIDILGDVVEASSLTPNAQLYGSLHNMGHNV 370
>EF382662-1|ABN54495.1| 178|Anopheles gambiae CPF family cuticle
protein protein.
Length = 178
Score = 23.8 bits (49), Expect = 4.8
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = -3
Query: 250 SAVFAAITTFAPSFAAFRAIALPIPREAPVINSVRPASF 134
+A +AA P+ A + A A+ AP++ + PA++
Sbjct: 106 AAHYAAPAVHYPAAAHYAAPAVHYAAHAPIVKAAYPAAY 144
>X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.
Length = 1231
Score = 23.0 bits (47), Expect = 8.4
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +3
Query: 543 SNHAHILNLSPPLNMNPYWFSI 608
S H+ L+ +PP+ +NP + I
Sbjct: 316 STHSMTLSWAPPIRLNPINYKI 337
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 596,544
Number of Sequences: 2352
Number of extensions: 10346
Number of successful extensions: 16
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64814025
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -