Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_F02
         (637 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_05_0410 + 21914995-21915168,21915268-21915353,21915446-219156...    32   0.44 
11_01_0292 - 2200714-2201478,2202691-2203395                           30   1.8  
02_02_0134 + 7082462-7082627,7084199-7084325,7084404-7084611,708...    29   3.1  
04_04_1273 - 32307273-32307569,32307659-32307791,32307874-323081...    28   7.1  
04_03_0583 + 17539541-17539978                                         28   7.1  
04_04_0466 + 25433678-25434007,25434118-25434176,25434345-254344...    27   9.4  
02_03_0273 + 17173983-17174339,17174423-17174575,17174638-171747...    27   9.4  

>01_05_0410 +
           21914995-21915168,21915268-21915353,21915446-21915656,
           21915869-21915998,21916740-21916924,21917014-21917145,
           21917329-21917433
          Length = 340

 Score = 31.9 bits (69), Expect = 0.44
 Identities = 20/68 (29%), Positives = 35/68 (51%)
 Frame = -3

Query: 419 LLRANLHWRQLLDVLLIVSETFRDFLIEGVHQIFKRTGESLSEIIPFAVLHVVLFTLHQX 240
           LL+   H  Q L +L  + + ++    EG+   +K  G S+  I+P+A LH +  T  Q 
Sbjct: 56  LLQTRTHGFQSLGILQSLRKLWQ---YEGIRGFYKGNGASVLRIVPYAALHYM--TYEQY 110

Query: 239 RFFVVIYF 216
           R +++  F
Sbjct: 111 RCWILNNF 118


>11_01_0292 - 2200714-2201478,2202691-2203395
          Length = 489

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
 Frame = -3

Query: 302 SLSEIIPFAVLHVVLFTLHQXRFFV--VIYFVGISFSFDHFTFQ 177
           S S  IPF     ++F L Q RF +  V+ FV IS +  HF F+
Sbjct: 279 SFSSFIPFDSR--IVFLLPQSRFPIWSVVLFVSISLALSHFIFE 320


>02_02_0134 +
           7082462-7082627,7084199-7084325,7084404-7084611,
           7084864-7084990,7085071-7085255,7085332-7085454,
           7085777-7085836,7085980-7086117
          Length = 377

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 17/69 (24%), Positives = 34/69 (49%)
 Frame = -3

Query: 413 RANLHWRQLLDVLLIVSETFRDFLIEGVHQIFKRTGESLSEIIPFAVLHVVLFTLHQXRF 234
           RA  H   L+     +S T      EG+   ++  G S++ I+P+A LH + +   + R 
Sbjct: 72  RAEFHGSGLIGSFRTISRT------EGLLGFYRGNGASVARIVPYAALHYMAY--EEYRR 123

Query: 233 FVVIYFVGI 207
           ++++ F  +
Sbjct: 124 WIILGFPNV 132


>04_04_1273 -
           32307273-32307569,32307659-32307791,32307874-32308105,
           32308220-32308436,32308594-32308718,32309416-32310757
          Length = 781

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 9/18 (50%), Positives = 15/18 (83%)
 Frame = -3

Query: 413 RANLHWRQLLDVLLIVSE 360
           RANLHWR+ LD++  +++
Sbjct: 567 RANLHWRRRLDIIQAIAK 584


>04_03_0583 + 17539541-17539978
          Length = 145

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 17/38 (44%), Positives = 18/38 (47%)
 Frame = +1

Query: 334 PSMRKSRNVSETMRRTSRSWRQCRFARRRKS*TNAKCG 447
           P  RK R      RR  R WR  R ARRR   TN + G
Sbjct: 13  PGRRKGR---PKRRRRQRGWRGRRNARRRGLQTNQRAG 47


>04_04_0466 +
           25433678-25434007,25434118-25434176,25434345-25434426,
           25435024-25435122,25435750-25435831,25436759-25436823,
           25437241-25438308,25438369-25438446,25438550-25438596,
           25438734-25438779,25438871-25438950,25439050-25439166,
           25439842-25439923,25440156-25440281,25440415-25440489,
           25440743-25440868,25441542-25441646
          Length = 888

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = +1

Query: 346 KSRNVSETMRRTSRSWRQCRFARRRK-S*TNAKCGGQSLATSGT 474
           +S + + + R  +R W   R  RRR+ +   A+C GQS+   G+
Sbjct: 29  RSPSSASSYRAAARWWPGARRGRRRRWAGLRARCAGQSVVKPGS 72


>02_03_0273 +
           17173983-17174339,17174423-17174575,17174638-17174700,
           17174943-17175026,17175120-17175242,17175466-17175519,
           17175669-17175764,17176163-17176258,17177179-17177324,
           17178503-17178632,17178697-17179272,17179364-17179462,
           17179535-17179687,17179794-17180558,17181384-17181683
          Length = 1064

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = +3

Query: 246 VKCKQDNMQNGEGDNFTETFSGSLEDLVNTFDEKITKCFGN 368
           +K +  NM+  +G NFT T   +L DL  +  +K+T   G+
Sbjct: 337 IKSESKNME--DGSNFTRTSRINLVDLAGSERQKLTNAAGD 375


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,062,147
Number of Sequences: 37544
Number of extensions: 277789
Number of successful extensions: 854
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 837
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 854
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1561213104
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)