Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_F02
(637 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_2439| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_59586| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_24814| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_54579| Best HMM Match : RVT_1 (HMM E-Value=2.7e-20) 28 5.5
SB_44245| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.5
SB_32874| Best HMM Match : Penaeidin (HMM E-Value=4.9) 28 5.5
SB_29973| Best HMM Match : RVT_1 (HMM E-Value=5.2e-21) 28 5.5
SB_48385| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.5
SB_30684| Best HMM Match : 7tm_1 (HMM E-Value=9.3e-11) 28 5.5
SB_30073| Best HMM Match : RVT_1 (HMM E-Value=3e-26) 28 7.3
SB_24979| Best HMM Match : DUF1309 (HMM E-Value=7.8) 28 7.3
SB_4810| Best HMM Match : NACHT (HMM E-Value=1.4e-09) 27 9.7
SB_56227| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
SB_33882| Best HMM Match : PsbI (HMM E-Value=0.46) 27 9.7
SB_24462| Best HMM Match : PsbI (HMM E-Value=0.17) 27 9.7
SB_13369| Best HMM Match : UPF0005 (HMM E-Value=0.3) 27 9.7
>SB_2439| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 951
Score = 30.7 bits (66), Expect = 1.0
Identities = 19/62 (30%), Positives = 30/62 (48%)
Frame = -3
Query: 320 FKRTGESLSEIIPFAVLHVVLFTLHQXRFFVVIYFVGISFSFDHFTFQIVNVVKDVIAVD 141
F TGES + P LH +L +L + +V I+F S FD ++ D++ V+
Sbjct: 752 FSVTGESTVQA-PVYFLHCILESLKRGENYVRIFFADFSKGFDLVDHNVLMSELDLLGVN 810
Query: 140 RL 135
L
Sbjct: 811 EL 812
>SB_59586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 29.5 bits (63), Expect = 2.4
Identities = 18/63 (28%), Positives = 31/63 (49%)
Frame = -3
Query: 320 FKRTGESLSEIIPFAVLHVVLFTLHQXRFFVVIYFVGISFSFDHFTFQIVNVVKDVIAVD 141
F TGES + + + LH +L +L + +V I+F S FD ++ D++ V+
Sbjct: 256 FSVTGESTVQSMVY-FLHCILESLERGENYVRIFFADFSKGFDLVDHNVLMSELDLLGVN 314
Query: 140 RLL 132
L
Sbjct: 315 EYL 317
>SB_24814| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 867
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/54 (24%), Positives = 31/54 (57%)
Frame = +3
Query: 273 NGEGDNFTETFSGSLEDLVNTFDEKITKCFGNYEENVEKLAPVQVRSQEEIMNE 434
+GE N T F+G +E L F ++ + +Y+ + +L ++S++E++++
Sbjct: 776 DGELANLTSQFTGEMEQLQKNFVKEREEMEKDYQSQINELEE-SLKSEKEVLSK 828
>SB_54579| Best HMM Match : RVT_1 (HMM E-Value=2.7e-20)
Length = 308
Score = 28.3 bits (60), Expect = 5.5
Identities = 15/60 (25%), Positives = 31/60 (51%)
Frame = -3
Query: 320 FKRTGESLSEIIPFAVLHVVLFTLHQXRFFVVIYFVGISFSFDHFTFQIVNVVKDVIAVD 141
F G+S ++ + + LH +L +L + ++ I+F S +D ++ D++AVD
Sbjct: 63 FSLKGKSTTQALIYC-LHTILESLDRGENYIRIFFADFSKGYDLVDHNVLVQELDLLAVD 121
>SB_44245| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 404
Score = 28.3 bits (60), Expect = 5.5
Identities = 17/63 (26%), Positives = 31/63 (49%)
Frame = -3
Query: 320 FKRTGESLSEIIPFAVLHVVLFTLHQXRFFVVIYFVGISFSFDHFTFQIVNVVKDVIAVD 141
F TG+S + + + LH +L +L + +V I+F S FD ++ D++ V+
Sbjct: 196 FSVTGKSTVQALVY-FLHCILESLKRGENYVRIFFADFSKGFDLVDHNVLMSELDLLGVN 254
Query: 140 RLL 132
L
Sbjct: 255 EYL 257
>SB_32874| Best HMM Match : Penaeidin (HMM E-Value=4.9)
Length = 192
Score = 28.3 bits (60), Expect = 5.5
Identities = 15/60 (25%), Positives = 31/60 (51%)
Frame = -3
Query: 320 FKRTGESLSEIIPFAVLHVVLFTLHQXRFFVVIYFVGISFSFDHFTFQIVNVVKDVIAVD 141
F G+S ++ + + LH +L +L + ++ I+F S +D ++ D++AVD
Sbjct: 128 FSLKGKSTTQALIYC-LHTILESLDRGENYIRIFFADFSKGYDLVDHNVLVQELDLLAVD 186
>SB_29973| Best HMM Match : RVT_1 (HMM E-Value=5.2e-21)
Length = 499
Score = 28.3 bits (60), Expect = 5.5
Identities = 15/60 (25%), Positives = 31/60 (51%)
Frame = -3
Query: 320 FKRTGESLSEIIPFAVLHVVLFTLHQXRFFVVIYFVGISFSFDHFTFQIVNVVKDVIAVD 141
F G+S ++ + + LH +L +L + ++ I+F S +D ++ D++AVD
Sbjct: 182 FSLKGKSTTQALIYC-LHTILESLDRGENYIRIFFADFSKGYDLVDHNVLVQELDLLAVD 240
>SB_48385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 386
Score = 28.3 bits (60), Expect = 5.5
Identities = 14/60 (23%), Positives = 21/60 (35%)
Frame = +3
Query: 222 NDNEEPXLVKCKQDNMQNGEGDNFTETFSGSLEDLVNTFDEKITKCFGNYEENVEKLAPV 401
NDN DN + + + S + N ++ T F NY N AP+
Sbjct: 288 NDNNASSTASIANDNNASSTAPIANDYNASSTAPIANDYNASSTAPFANYYNNTSSTAPI 347
>SB_30684| Best HMM Match : 7tm_1 (HMM E-Value=9.3e-11)
Length = 540
Score = 28.3 bits (60), Expect = 5.5
Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = -3
Query: 500 RFGPVNR*DVPEVA-SDCPPHLAFVHDFLLRANLHWRQLLDVLLIVSETF 354
R+G ++R D+ ++ +D P H+ D+ LRA L +++D + ET+
Sbjct: 73 RWGAMSRLDMDQIELTDSPKHVMLTADYDLRAQLCGDEVIDSIEERCETY 122
>SB_30073| Best HMM Match : RVT_1 (HMM E-Value=3e-26)
Length = 416
Score = 27.9 bits (59), Expect = 7.3
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = -3
Query: 320 FKRTGESLSEIIPFAVLHVVLFTLHQXRFFVVIYFVGISFSFD 192
F +G S + + + +LH++L L + F+ ++F S FD
Sbjct: 128 FSMSGRSTTHALVY-MLHIILAALDKGNCFIRVFFADFSKGFD 169
>SB_24979| Best HMM Match : DUF1309 (HMM E-Value=7.8)
Length = 404
Score = 27.9 bits (59), Expect = 7.3
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +3
Query: 420 EIMNEC-QMWWTITGNFGNILPIDWTKSFSRKM 515
+IMN Q+ TIT FG IL +D TK +K+
Sbjct: 132 DIMNRMDQIKATITSTFGTILKMDSTKKIVKKL 164
>SB_4810| Best HMM Match : NACHT (HMM E-Value=1.4e-09)
Length = 682
Score = 27.5 bits (58), Expect = 9.7
Identities = 12/21 (57%), Positives = 16/21 (76%), Gaps = 1/21 (4%)
Frame = +3
Query: 348 ITK-CFGNYEENVEKLAPVQV 407
ITK CFGNYE++ K+ P+ V
Sbjct: 60 ITKQCFGNYEKDYMKIIPIFV 80
>SB_56227| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 757
Score = 27.5 bits (58), Expect = 9.7
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = -1
Query: 604 EATASXCELWXSSSGVNEFFVSLKFNVGICIFLEKDLVQSIGKMFPKLPVI 452
+ AS E W S VN F + +VGI +++ + SI K FP +P +
Sbjct: 377 DCAASKDEKWRSDQLVNLTFSAR--HVGISVWVITQQLTSITKPFPAVPAL 425
>SB_33882| Best HMM Match : PsbI (HMM E-Value=0.46)
Length = 107
Score = 27.5 bits (58), Expect = 9.7
Identities = 12/21 (57%), Positives = 16/21 (76%), Gaps = 1/21 (4%)
Frame = +3
Query: 348 ITK-CFGNYEENVEKLAPVQV 407
ITK CFGNYE++ K+ P+ V
Sbjct: 60 ITKQCFGNYEKDYMKIIPIFV 80
>SB_24462| Best HMM Match : PsbI (HMM E-Value=0.17)
Length = 195
Score = 27.5 bits (58), Expect = 9.7
Identities = 12/21 (57%), Positives = 16/21 (76%), Gaps = 1/21 (4%)
Frame = +3
Query: 348 ITK-CFGNYEENVEKLAPVQV 407
ITK CFGNYE++ K+ P+ V
Sbjct: 60 ITKQCFGNYEKDYMKIIPIFV 80
>SB_13369| Best HMM Match : UPF0005 (HMM E-Value=0.3)
Length = 509
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/65 (21%), Positives = 32/65 (49%)
Frame = -3
Query: 290 IIPFAVLHVVLFTLHQXRFFVVIYFVGISFSFDHFTFQIVNVVKDVIAVDRLLGKVGCRE 111
+ P ++H+V+FT+ F ++I + ++F+ F I+ + + V L+ +
Sbjct: 102 VFPIIIVHLVIFTVAALVFSIIIVHL-VNFTVTALVFSIIIIHLVIFTVTALVFSIIFVH 160
Query: 110 AIVRF 96
+V F
Sbjct: 161 VVVVF 165
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,392,202
Number of Sequences: 59808
Number of extensions: 323223
Number of successful extensions: 1030
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 967
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1027
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1596754500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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