Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_F01
(653 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0360 + 22353057-22353691,22354716-22355144,22355233-223553... 198 2e-51
04_04_0141 + 23079516-23079925,23080006-23080084,23080204-230803... 196 1e-50
08_02_0753 - 20805672-20805731,20805825-20805941,20806394-208065... 190 1e-48
03_05_0881 + 28461857-28462263,28462357-28462435,28462798-284629... 185 2e-47
08_02_1026 + 23743186-23743686,23743793-23743915,23744734-237448... 181 5e-46
11_06_0036 + 19474848-19475188,19475696-19475774,19475880-194760... 161 6e-40
11_06_0360 - 22699524-22699529,22699865-22699899,22700650-227007... 139 2e-33
01_01_0767 + 5931031-5931281,5931414-5931594,5932020-5932129,593... 85 4e-17
08_02_1528 + 27666356-27667081 29 4.3
06_03_1004 - 26832638-26833183,26833373-26833569,26833636-268338... 28 7.5
02_05_0552 - 29911280-29912541,29912633-29912762 28 7.5
>02_04_0360 +
22353057-22353691,22354716-22355144,22355233-22355311,
22355472-22355594,22356256-22356372,22356636-22356833
Length = 526
Score = 198 bits (484), Expect = 2e-51
Identities = 102/184 (55%), Positives = 131/184 (71%), Gaps = 4/184 (2%)
Frame = +2
Query: 110 SSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTET--GVELSNEERNLLSVAYKNVVG 283
S + +EE V AKLAEQAERY++M M++V +T EL+ EERNLLSVAYKNV+G
Sbjct: 220 SQPAELSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVIG 279
Query: 284 ARRSSWRVISSIEQKTE--GSERKQQMAKEYXVKVQKELXEICYDVLGLLDKHLIPKASN 457
ARR+SWR+ISSIEQK E G+E + + KEY K++ EL +IC +L LLD HL+P ++
Sbjct: 280 ARRASWRIISSIEQKEESRGNEDRCTLIKEYRGKIETELSKICDGILKLLDSHLVPSSTA 339
Query: 458 PXSKVFYLKMKGXYYRYLAXXATGXTXHSVVQDSXKAYQDAFEISKAKMQPTHPITLGLA 637
P SKVFYLKMKG YYRYLA TG +++ AY+ A +I+ A++ PTHPI LGLA
Sbjct: 340 PESKVFYLKMKGDYYRYLAEFKTGAERKDAAENTMVAYKAAQDIALAELPPTHPIRLGLA 399
Query: 638 LNFS 649
LNFS
Sbjct: 400 LNFS 403
>04_04_0141 +
23079516-23079925,23080006-23080084,23080204-23080326,
23081655-23081771,23081886-23081945
Length = 262
Score = 196 bits (479), Expect = 1e-50
Identities = 100/184 (54%), Positives = 132/184 (71%), Gaps = 4/184 (2%)
Frame = +2
Query: 110 SSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTET--GVELSNEERNLLSVAYKNVVG 283
S+ + +EE V AKLAEQAERY++M M++V +T EL+ EERNLLSVAYKNV+G
Sbjct: 2 SAQAELSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVIG 61
Query: 284 ARRSSWRVISSIEQKTE--GSERKQQMAKEYXVKVQKELXEICYDVLGLLDKHLIPKASN 457
ARR+SWR+ISSIEQK E G+E + + K+Y K++ EL +IC +L LL+ HL+P ++
Sbjct: 62 ARRASWRIISSIEQKEESRGNEDRVTLIKDYRGKIETELTKICDGILKLLESHLVPSSTA 121
Query: 458 PXSKVFYLKMKGXYYRYLAXXATGXTXHSVVQDSXKAYQDAFEISKAKMQPTHPITLGLA 637
P SKVFYLKMKG YYRYLA TG +++ AY+ A +I+ A++ PTHPI LGLA
Sbjct: 122 PESKVFYLKMKGDYYRYLAEFKTGAERKDAAENTMVAYKAAQDIALAELPPTHPIRLGLA 181
Query: 638 LNFS 649
LNFS
Sbjct: 182 LNFS 185
>08_02_0753 -
20805672-20805731,20805825-20805941,20806394-20806516,
20806700-20806778,20806867-20807258
Length = 256
Score = 190 bits (462), Expect = 1e-48
Identities = 98/179 (54%), Positives = 126/179 (70%), Gaps = 4/179 (2%)
Frame = +2
Query: 125 VDKEELVQRAKLAEQAERYDDMAAAMKEVTETG--VELSNEERNLLSVAYKNVVGARRSS 298
+ +EE V AKLAEQAERY++M M++V +T EL+ EERNLLSVAYKNV+GARR+S
Sbjct: 1 MSREENVYMAKLAEQAERYEEMVEYMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRAS 60
Query: 299 WRVISSIEQKTEG--SERKQQMAKEYXVKVQKELXEICYDVLGLLDKHLIPKASNPXSKV 472
WR++SSIEQK EG +E + KEY K++ EL +IC +L LLD HL+P ++ SKV
Sbjct: 61 WRIVSSIEQKEEGRGNEEHVTLIKEYRGKIEAELSKICDGILKLLDSHLVPSSTAAESKV 120
Query: 473 FYLKMKGXYYRYLAXXATGXTXHSVVQDSXKAYQDAFEISKAKMQPTHPITLGLALNFS 649
FYLKMKG Y+RYLA TG + + AY+ A +I+ A + PTHPI LGLALNFS
Sbjct: 121 FYLKMKGDYHRYLAEFKTGAERKEAAESTMVAYKAAQDIALADLAPTHPIRLGLALNFS 179
>03_05_0881 +
28461857-28462263,28462357-28462435,28462798-28462920,
28463632-28463748,28463861-28463917
Length = 260
Score = 185 bits (451), Expect = 2e-47
Identities = 98/183 (53%), Positives = 125/183 (68%), Gaps = 4/183 (2%)
Frame = +2
Query: 113 STMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGV--ELSNEERNLLSVAYKNVVGA 286
S +EE V AKLAEQAERY++M M++V +T EL+ EERNLLSVAYKNV+GA
Sbjct: 2 SPAEASREENVYMAKLAEQAERYEEMVEFMEKVAKTTDVGELTVEERNLLSVAYKNVIGA 61
Query: 287 RRSSWRVISSIEQKTE--GSERKQQMAKEYXVKVQKELXEICYDVLGLLDKHLIPKASNP 460
RR+SWR+ISSIEQK E G+E KEY +++ EL +IC +L LLD HL+P A+
Sbjct: 62 RRASWRIISSIEQKEESRGNEAYVASIKEYRSRIETELSKICDGILKLLDSHLVPSATAA 121
Query: 461 XSKVFYLKMKGXYYRYLAXXATGXTXHSVVQDSXKAYQDAFEISKAKMQPTHPITLGLAL 640
SKVFYLKMKG Y+RYLA +G +++ AY+ A +I+ A + THPI LGLAL
Sbjct: 122 ESKVFYLKMKGDYHRYLAEFKSGAERKEAAENTLVAYKSAQDIALADLPTTHPIRLGLAL 181
Query: 641 NFS 649
NFS
Sbjct: 182 NFS 184
>08_02_1026 +
23743186-23743686,23743793-23743915,23744734-23744850,
23744948-23745001
Length = 264
Score = 181 bits (440), Expect = 5e-46
Identities = 95/180 (52%), Positives = 121/180 (67%), Gaps = 7/180 (3%)
Frame = +2
Query: 131 KEELVQRAKLAEQAERYDDMAAAMKEVTET-----GVELSNEERNLLSVAYKNVVGARRS 295
+EE+V AKLAEQAERY++M M++V G EL+ EERNLLSVAYKNV+GARR+
Sbjct: 10 REEMVYMAKLAEQAERYEEMVEFMEKVVTAAAAGGGGELTVEERNLLSVAYKNVIGARRA 69
Query: 296 SWRVISSIEQKTEG--SERKQQMAKEYXVKVQKELXEICYDVLGLLDKHLIPKASNPXSK 469
SWR++SSIEQK EG + A+ Y +V+ EL IC +L LLD+ L+P A+ +K
Sbjct: 70 SWRIVSSIEQKEEGRGAAGHAAAARSYRARVEAELSNICAGILRLLDERLVPAAAAVDAK 129
Query: 470 VFYLKMKGXYYRYLAXXATGXTXHSVVQDSXKAYQDAFEISKAKMQPTHPITLGLALNFS 649
VFYLKMKG Y+RYLA TG + AYQ A +I+ ++ PTHPI LGLALNFS
Sbjct: 130 VFYLKMKGDYHRYLAEFKTGAERKDAADATLAAYQAAQDIAMKELSPTHPIRLGLALNFS 189
>11_06_0036 +
19474848-19475188,19475696-19475774,19475880-19476002,
19476970-19477086,19477169-19477228
Length = 239
Score = 161 bits (390), Expect = 6e-40
Identities = 81/145 (55%), Positives = 98/145 (67%), Gaps = 2/145 (1%)
Frame = +2
Query: 221 GVELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSERKQQMA--KEYXVKVQKEL 394
G EL+ EERNLLSVAYKNV+GARR+SWR+ISSIEQK EG A + Y K++ EL
Sbjct: 18 GEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEEGRGNDAHAATIRSYRGKIEAEL 77
Query: 395 XEICYDVLGLLDKHLIPKASNPXSKVFYLKMKGXYYRYLAXXATGXTXHSVVQDSXKAYQ 574
IC +L LLD HL+P A SKVFYLKMKG Y+RYLA +G + + AY+
Sbjct: 78 ARICDGILALLDSHLVPSAGAAESKVFYLKMKGDYHRYLAEFKSGDERKQAAESTMNAYK 137
Query: 575 DAFEISKAKMQPTHPITLGLALNFS 649
A +I+ A + PTHPI LGLALNFS
Sbjct: 138 AAQDIALADLAPTHPIRLGLALNFS 162
>11_06_0360 -
22699524-22699529,22699865-22699899,22700650-22700792,
22701165-22701220,22701367-22701454,22702737-22703037,
22704365-22704428
Length = 230
Score = 139 bits (336), Expect = 2e-33
Identities = 66/149 (44%), Positives = 94/149 (63%)
Frame = +2
Query: 128 DKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRV 307
++E++V+ AKLAEQAERYDDM MK + V++S EER L SV +K +GARR+SWR+
Sbjct: 3 EREKVVRLAKLAEQAERYDDMVEFMKTLARMDVDMSAEERLLFSVGFKKTIGARRASWRI 62
Query: 308 ISSIEQKTEGSERKQQMAKEYXVKVQKELXEICYDVLGLLDKHLIPKASNPXSKVFYLKM 487
+ S+EQK ++ Y KV+ EL +C +VL ++ H +P A++ + VF+ KM
Sbjct: 63 LESLEQKVTAGDQPGVTINGYKKKVEDELRAVCNEVLSIIAIHCLPLANSGENVVFFYKM 122
Query: 488 KGXYYRYLAXXATGXTXHSVVQDSXKAYQ 574
KG YYRYLA +TG + S AYQ
Sbjct: 123 KGDYYRYLAEFSTGTEKKAATDQSLMAYQ 151
>01_01_0767 +
5931031-5931281,5931414-5931594,5932020-5932129,
5932212-5932360,5932686-5932738,5933168-5933260
Length = 278
Score = 85.4 bits (202), Expect = 4e-17
Identities = 52/131 (39%), Positives = 72/131 (54%), Gaps = 2/131 (1%)
Frame = +2
Query: 188 MAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRVISSIE--QKTEGSERKQQMA 361
M AM V + L+ EERNLLSV YKN++GA+R++ R+I SIE ++T+G E +
Sbjct: 1 MVEAMNSVAKLDEGLTKEERNLLSVGYKNLIGAKRAAMRIIGSIELKEETKGKESHVRQT 60
Query: 362 KEYXVKVQKELXEICYDVLGLLDKHLIPKASNPXSKVFYLKMKGXYYRYLAXXATGXTXH 541
EY KV+ E+ +IC DV+ ++DK KG YYRYLA TG
Sbjct: 61 AEYRRKVEAEMDKICCDVINIIDK------------------KGDYYRYLAEFKTGTEKI 102
Query: 542 SVVQDSXKAYQ 574
V + S AY+
Sbjct: 103 EVSELSLNAYE 113
>08_02_1528 + 27666356-27667081
Length = 241
Score = 28.7 bits (61), Expect = 4.3
Identities = 20/88 (22%), Positives = 35/88 (39%), Gaps = 1/88 (1%)
Frame = +2
Query: 116 TMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRS 295
T V K+ K A + + + E E + + +LLS K + + S
Sbjct: 130 TKKVQKQSKKISKKSASAEQEGSRVIKLLAEAREVAISMLESSSHLLS---KKITTSNSS 186
Query: 296 SWRVISSIEQKTE-GSERKQQMAKEYXV 376
W ++S QKT + +Q A E+ +
Sbjct: 187 KWSLVSKAFQKTRLACQEEQLQALEFAI 214
>06_03_1004 -
26832638-26833183,26833373-26833569,26833636-26833861,
26833943-26834072,26835884-26836188
Length = 467
Score = 27.9 bits (59), Expect = 7.5
Identities = 21/82 (25%), Positives = 36/82 (43%), Gaps = 10/82 (12%)
Frame = +2
Query: 191 AAAMKEVTETGVELSNEERNLLSVAYKNV-----VGARRSSWRVISSI-----EQKTEGS 340
AA K+V+ G+ + EE ++ A+ N+ G ++S + E K EGS
Sbjct: 186 AAKKKKVSRRGIAFTKEEDMVVCSAFLNISKDPITGVNQTSSGYYKRMRDYFNEHKPEGS 245
Query: 341 ERKQQMAKEYXVKVQKELXEIC 406
R Q + +QK + + C
Sbjct: 246 NRSQIAIQHRWALIQKAINKFC 267
>02_05_0552 - 29911280-29912541,29912633-29912762
Length = 463
Score = 27.9 bits (59), Expect = 7.5
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +2
Query: 56 SNTFFPFRQGHQ*ISPLPSSTMSVDKEELVQRAKL-AEQAERYDDMAAAM 202
S T H SP+PSS +EEL++R +L AE +R M AA+
Sbjct: 50 SGTTVALNHRHGPCSPVPSSKKRPTEEELLKRDQLRAEHIQRKFAMNAAV 99
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,849,953
Number of Sequences: 37544
Number of extensions: 318239
Number of successful extensions: 865
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 834
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 853
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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