Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_F01
(653 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_34219| Best HMM Match : No HMM Matches (HMM E-Value=.) 180 7e-46
SB_36368| Best HMM Match : 14-3-3 (HMM E-Value=0) 176 1e-44
SB_34217| Best HMM Match : No HMM Matches (HMM E-Value=.) 153 1e-37
SB_37955| Best HMM Match : 14-3-3 (HMM E-Value=6.5861e-44) 140 1e-33
SB_34218| Best HMM Match : No HMM Matches (HMM E-Value=.) 79 2e-15
SB_23775| Best HMM Match : Tropomyosin (HMM E-Value=0) 32 0.35
SB_42896| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_42068| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_41093| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_12646| Best HMM Match : SSrecog (HMM E-Value=0) 28 7.6
>SB_34219| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 309
Score = 180 bits (439), Expect = 7e-46
Identities = 95/156 (60%), Positives = 108/156 (69%), Gaps = 2/156 (1%)
Frame = +2
Query: 188 MAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSERKQQMAKE 367
MA AMKE TE L EERNLLSVAYKNVVGA+RSSWRVISSIEQK EGSERK+Q +
Sbjct: 1 MAKAMKEATEISETLEQEERNLLSVAYKNVVGAKRSSWRVISSIEQKLEGSERKKQNTET 60
Query: 368 YXVKVQKELXEICYDVLGLLDKHLIPKASNPXSKVFYLKMKGXYYRYLAXXATGXTXHSV 547
Y ++ EL E+C VL LL+ LIP A + SKVFYLKMKG YYRY A V
Sbjct: 61 YRQTIENELNEVCETVLKLLESKLIPNAQSTESKVFYLKMKGDYYRYEGEVAGADRRREV 120
Query: 548 VQDSXKAYQDAFEISK--AKMQPTHPITLGLALNFS 649
VQ + KAY +A EI++ K+ PT PI LGLALNFS
Sbjct: 121 VQKAMKAYSEAQEIAEKDPKLPPTDPIRLGLALNFS 156
Score = 37.1 bits (82), Expect = 0.012
Identities = 19/39 (48%), Positives = 28/39 (71%), Gaps = 3/39 (7%)
Frame = +2
Query: 542 SVVQDSXKAYQDAFEISKA---KMQPTHPITLGLALNFS 649
+VV+ + +AY++A E ++ K+ PT PI LGLALNFS
Sbjct: 207 TVVEKALQAYKEAKEAAETGDGKLAPTDPIRLGLALNFS 245
>SB_36368| Best HMM Match : 14-3-3 (HMM E-Value=0)
Length = 248
Score = 176 bits (428), Expect = 1e-44
Identities = 93/184 (50%), Positives = 120/184 (65%), Gaps = 3/184 (1%)
Frame = +2
Query: 107 PSSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGA 286
P+ +EEL+ AK+AEQAERYDDM AM VT+ G L++EERNLLSVAYKNVVGA
Sbjct: 3 PNFVSKCSREELIHLAKMAEQAERYDDMVNAMSAVTKEGKPLNDEERNLLSVAYKNVVGA 62
Query: 287 RRSSWRVISSIEQKTEGSERKQQMAKEYXVKVQKELXEICYDVLGLLDKHLIPKAS---N 457
RRSSWRVISS+EQK E + K+Y + EL C +VL +L+ +L+ N
Sbjct: 63 RRSSWRVISSMEQK--APEEMAALTKKYREDITNELNGKCAEVLDILENYLLKDGQDDIN 120
Query: 458 PXSKVFYLKMKGXYYRYLAXXATGXTXHSVVQDSXKAYQDAFEISKAKMQPTHPITLGLA 637
+KVFYLKM+G Y+RYL A G + ++ S +AY+DA ++ P+HPI LGLA
Sbjct: 121 TEAKVFYLKMRGDYHRYLVEVAEGDSRKENIEKSREAYKDA-SAKAEELSPSHPIRLGLA 179
Query: 638 LNFS 649
LNFS
Sbjct: 180 LNFS 183
>SB_34217| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 219
Score = 153 bits (371), Expect = 1e-37
Identities = 77/137 (56%), Positives = 101/137 (73%)
Frame = +2
Query: 119 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSS 298
M V +E L+ AKL+EQ +RYD+MA MKEV+E +LS EERNLLSV+YKN+VG RRSS
Sbjct: 80 MMVVRETLIYNAKLSEQCDRYDEMAKIMKEVSEKYPKLSKEERNLLSVSYKNIVGQRRSS 139
Query: 299 WRVISSIEQKTEGSERKQQMAKEYXVKVQKELXEICYDVLGLLDKHLIPKASNPXSKVFY 478
WRVISSIE+KT S + K+Y ++KEL ++C +VLG+L++ LIP A + +KVFY
Sbjct: 140 WRVISSIEEKTAESS-SLAIVKKYKACIEKELKDLCKEVLGILER-LIPGAEDEENKVFY 197
Query: 479 LKMKGXYYRYLAXXATG 529
K+KG YYRYLA + G
Sbjct: 198 FKLKGDYYRYLAEFSHG 214
>SB_37955| Best HMM Match : 14-3-3 (HMM E-Value=6.5861e-44)
Length = 251
Score = 140 bits (338), Expect = 1e-33
Identities = 72/123 (58%), Positives = 90/123 (73%), Gaps = 3/123 (2%)
Frame = +2
Query: 128 DKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRV 307
DKEE V AKLAEQAERYDDM +MKEV + G ELS E+RNLLSVAYKNV+GARR+SWR+
Sbjct: 3 DKEEHVYMAKLAEQAERYDDMVNSMKEVAKMGTELSTEDRNLLSVAYKNVIGARRASWRI 62
Query: 308 ISSIEQKTE--GSE-RKQQMAKEYXVKVQKELXEICYDVLGLLDKHLIPKASNPXSKVFY 478
I+SIEQK E G + K +M + Y +++EL IC ++L LLD LI + + SKVFY
Sbjct: 63 ITSIEQKEESKGEDMAKLEMIRNYRKTIEEELKTICGEILSLLDDSLIKNSQSEESKVFY 122
Query: 479 LKM 487
K+
Sbjct: 123 NKI 125
>SB_34218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 607
Score = 79.4 bits (187), Expect = 2e-15
Identities = 42/102 (41%), Positives = 61/102 (59%), Gaps = 2/102 (1%)
Frame = +2
Query: 119 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSS 298
M + ELVQ AKLAEQ ER++D+ MK+ E L+ E RNLLSV YKNVVG++R +
Sbjct: 186 MQDSRNELVQLAKLAEQTERFEDVILYMKKAIEINPSLNKEHRNLLSVGYKNVVGSKRFA 245
Query: 299 WRVISSIEQKTEGSERKQQMAK--EYXVKVQKELXEICYDVL 418
WR + ++ R Q+ +Y K++ EL +C ++L
Sbjct: 246 WRHLHHDALQSGRYIRDSQLKGIIKYKEKIEMELKTLCREIL 287
>SB_23775| Best HMM Match : Tropomyosin (HMM E-Value=0)
Length = 442
Score = 32.3 bits (70), Expect = 0.35
Identities = 22/86 (25%), Positives = 40/86 (46%)
Frame = +2
Query: 131 KEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRVI 310
KE+ AK ++ ER + A K+ E + EE++ L K R+ +
Sbjct: 339 KEKERLEAKQKKEQERLEKQAEKEKKEKERLEKKQREEKDRLEKKEKKEEEKRKKEEEIN 398
Query: 311 SSIEQKTEGSERKQQMAKEYXVKVQK 388
+ IE+K + E+K+Q +E K ++
Sbjct: 399 AKIEEKKKREEKKKQEEEEKMKKKEQ 424
>SB_42896| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 994
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +2
Query: 95 ISPLPSSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEER 247
+SPLPS+ +E+V KLAE+ E ++++ T+ E + EE+
Sbjct: 643 VSPLPSTATEDQMQEVVDSNKLAEKKEVTEEVSPVKPLSTKESKENALEEK 693
>SB_42068| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3367
Score = 29.5 bits (63), Expect = 2.5
Identities = 27/121 (22%), Positives = 55/121 (45%), Gaps = 12/121 (9%)
Frame = +2
Query: 116 TMSVDKEELVQRAKLAEQAERY---DDMAAAMKEVTETGVELSNE-ERNLLSVAYKNVVG 283
++S+ +EL + LA Q + D A K+VT ++ + E R + +
Sbjct: 3123 SLSLKSQELEAKNALANQKLKQMVKDQQEAEKKKVTSMEIQTTIETHRKQTIIEMVSCAA 3182
Query: 284 ARRSSWR--------VISSIEQKTEGSERKQQMAKEYXVKVQKELXEICYDVLGLLDKHL 439
R S++ + SS++++T+ + KQQ + +V+ + E V G+ +HL
Sbjct: 3183 CLRKSYQESAFLDLLITSSLQKQTKQIKEKQQAVMKDLAQVEPAVDEARQAVKGIKKQHL 3242
Query: 440 I 442
+
Sbjct: 3243 V 3243
>SB_41093| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 586
Score = 28.3 bits (60), Expect = 5.8
Identities = 25/100 (25%), Positives = 44/100 (44%), Gaps = 6/100 (6%)
Frame = +2
Query: 110 SSTMSVDKEELVQRAK-LAEQAERYDDMAAAMKEVTETGVELS-NEERNLLSVAY----K 271
SS++ E + K +E+ E+ A KE E ++ + +EER + Y K
Sbjct: 359 SSSLREKNEACLSECKETSEEIEQLKVDLAKYKEAAEKDLDKALSEERAKFTEEYAKLEK 418
Query: 272 NVVGARRSSWRVISSIEQKTEGSERKQQMAKEYXVKVQKE 391
ARR + + S+ Q R+++ KE + QK+
Sbjct: 419 QFNDARREHMKAVVSLRQAERQLAREKEKGKEQIAQKQKD 458
>SB_12646| Best HMM Match : SSrecog (HMM E-Value=0)
Length = 783
Score = 27.9 bits (59), Expect = 7.6
Identities = 10/34 (29%), Positives = 22/34 (64%)
Frame = +2
Query: 347 KQQMAKEYXVKVQKELXEICYDVLGLLDKHLIPK 448
K++M ++Y K++KE+ Y+++ L K ++ K
Sbjct: 292 KEEMKEKYDGKIEKEMSGAIYEIISRLMKAVVGK 325
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,425,142
Number of Sequences: 59808
Number of extensions: 361175
Number of successful extensions: 952
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 882
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 946
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1669334250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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