BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_F01
(653 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66564-5|CAC42300.2| 198|Caenorhabditis elegans Hypothetical pr... 279 2e-75
Z66564-2|CAA91474.1| 248|Caenorhabditis elegans Hypothetical pr... 279 2e-75
Z73910-2|CAA98138.1| 248|Caenorhabditis elegans Hypothetical pr... 263 9e-71
U05038-1|AAA61872.1| 248|Caenorhabditis elegans 14-3-3 protein ... 261 3e-70
Z73910-3|CAA98135.1| 125|Caenorhabditis elegans Hypothetical pr... 46 2e-05
U40933-5|AAA81675.1| 1116|Caenorhabditis elegans Hypothetical pr... 33 0.18
Z35595-5|CAA84636.1| 952|Caenorhabditis elegans Hypothetical pr... 33 0.23
AF039713-2|AAB96726.2| 476|Caenorhabditis elegans Hypothetical ... 30 1.6
Z47357-2|CAD54175.1| 464|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z70684-1|CAA94597.1| 580|Caenorhabditis elegans Hypothetical pr... 28 6.7
AL032630-13|CAA21568.1| 348|Caenorhabditis elegans Hypothetical... 28 6.7
Z50742-1|CAA90614.2| 605|Caenorhabditis elegans Hypothetical pr... 27 8.8
>Z66564-5|CAC42300.2| 198|Caenorhabditis elegans Hypothetical
protein F52D10.3b protein.
Length = 198
Score = 279 bits (683), Expect = 2e-75
Identities = 139/177 (78%), Positives = 152/177 (85%)
Frame = +2
Query: 119 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSS 298
MS KEELV RAKLAEQAERYDDMAA+MK+VTE G ELSNEERNLLSVAYKNVVGARRSS
Sbjct: 1 MSDGKEELVNRAKLAEQAERYDDMAASMKKVTELGAELSNEERNLLSVAYKNVVGARRSS 60
Query: 299 WRVISSIEQKTEGSERKQQMAKEYXVKVQKELXEICYDVLGLLDKHLIPKASNPXSKVFY 478
WRVISSIEQKTEGSE+KQQMAKEY KV+KEL +IC DVL LLDK LIPKA SKVFY
Sbjct: 61 WRVISSIEQKTEGSEKKQQMAKEYREKVEKELRDICQDVLNLLDKFLIPKAGAAESKVFY 120
Query: 479 LKMKGXYYRYLAXXATGXTXHSVVQDSXKAYQDAFEISKAKMQPTHPITLGLALNFS 649
LKMKG YYRYLA A+G +SVV+ S ++YQ+AF+I+K KMQPTHPI LGLALNFS
Sbjct: 121 LKMKGDYYRYLAEVASGDDRNSVVEKSQQSYQEAFDIAKDKMQPTHPIRLGLALNFS 177
>Z66564-2|CAA91474.1| 248|Caenorhabditis elegans Hypothetical
protein F52D10.3a protein.
Length = 248
Score = 279 bits (683), Expect = 2e-75
Identities = 139/177 (78%), Positives = 152/177 (85%)
Frame = +2
Query: 119 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSS 298
MS KEELV RAKLAEQAERYDDMAA+MK+VTE G ELSNEERNLLSVAYKNVVGARRSS
Sbjct: 1 MSDGKEELVNRAKLAEQAERYDDMAASMKKVTELGAELSNEERNLLSVAYKNVVGARRSS 60
Query: 299 WRVISSIEQKTEGSERKQQMAKEYXVKVQKELXEICYDVLGLLDKHLIPKASNPXSKVFY 478
WRVISSIEQKTEGSE+KQQMAKEY KV+KEL +IC DVL LLDK LIPKA SKVFY
Sbjct: 61 WRVISSIEQKTEGSEKKQQMAKEYREKVEKELRDICQDVLNLLDKFLIPKAGAAESKVFY 120
Query: 479 LKMKGXYYRYLAXXATGXTXHSVVQDSXKAYQDAFEISKAKMQPTHPITLGLALNFS 649
LKMKG YYRYLA A+G +SVV+ S ++YQ+AF+I+K KMQPTHPI LGLALNFS
Sbjct: 121 LKMKGDYYRYLAEVASGDDRNSVVEKSQQSYQEAFDIAKDKMQPTHPIRLGLALNFS 177
>Z73910-2|CAA98138.1| 248|Caenorhabditis elegans Hypothetical
protein M117.2 protein.
Length = 248
Score = 263 bits (644), Expect = 9e-71
Identities = 136/177 (76%), Positives = 149/177 (84%)
Frame = +2
Query: 119 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSS 298
MS EELVQRAKLAEQAERYDDMAAAMK+VTE G ELSNEERNLLSVAYKNVVGARRSS
Sbjct: 1 MSDTVEELVQRAKLAEQAERYDDMAAAMKKVTEQGQELSNEERNLLSVAYKNVVGARRSS 60
Query: 299 WRVISSIEQKTEGSERKQQMAKEYXVKVQKELXEICYDVLGLLDKHLIPKASNPXSKVFY 478
WRVISSIEQKTEGSE+KQQ+AKEY VKV++EL +IC DVL LLD+ LI KA SKVFY
Sbjct: 61 WRVISSIEQKTEGSEKKQQLAKEYRVKVEQELNDICQDVLKLLDEFLIVKAGAAESKVFY 120
Query: 479 LKMKGXYYRYLAXXATGXTXHSVVQDSXKAYQDAFEISKAKMQPTHPITLGLALNFS 649
LKMKG YYRYLA A+ +VV+ S KAYQ+A +I+K KMQPTHPI LGLALNFS
Sbjct: 121 LKMKGDYYRYLAEVAS-EDRAAVVEKSQKAYQEALDIAKDKMQPTHPIRLGLALNFS 176
>U05038-1|AAA61872.1| 248|Caenorhabditis elegans 14-3-3 protein
protein.
Length = 248
Score = 261 bits (640), Expect = 3e-70
Identities = 135/177 (76%), Positives = 148/177 (83%)
Frame = +2
Query: 119 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSS 298
MS EELVQRAKLAEQAERYDDMAAAMK+VTE G ELSNEERNLLSVAYKNVVGARRSS
Sbjct: 1 MSDTVEELVQRAKLAEQAERYDDMAAAMKKVTEQGQELSNEERNLLSVAYKNVVGARRSS 60
Query: 299 WRVISSIEQKTEGSERKQQMAKEYXVKVQKELXEICYDVLGLLDKHLIPKASNPXSKVFY 478
WRVISSIEQKTEGSE+KQQ+AKEY VKV++EL +IC DVL LLD+ LI KA SK FY
Sbjct: 61 WRVISSIEQKTEGSEKKQQLAKEYRVKVEQELNDICQDVLKLLDEFLIVKAGAAESKAFY 120
Query: 479 LKMKGXYYRYLAXXATGXTXHSVVQDSXKAYQDAFEISKAKMQPTHPITLGLALNFS 649
LKMKG YYRYLA A+ +VV+ S KAYQ+A +I+K KMQPTHPI LGLALNFS
Sbjct: 121 LKMKGDYYRYLAEVAS-EDRAAVVEKSQKAYQEALDIAKDKMQPTHPIRLGLALNFS 176
>Z73910-3|CAA98135.1| 125|Caenorhabditis elegans Hypothetical
protein M117.3 protein.
Length = 125
Score = 46.4 bits (105), Expect = 2e-05
Identities = 26/55 (47%), Positives = 30/55 (54%)
Frame = +2
Query: 485 MKGXYYRYLAXXATGXTXHSVVQDSXKAYQDAFEISKAKMQPTHPITLGLALNFS 649
M ++RYL S AYQ+A I+K KMQPTHPI LGLALN S
Sbjct: 1 MVADHFRYLVQY-DDINREEHAHKSRIAYQEALGIAKDKMQPTHPIRLGLALNAS 54
>U40933-5|AAA81675.1| 1116|Caenorhabditis elegans Hypothetical
protein F20D12.2 protein.
Length = 1116
Score = 33.1 bits (72), Expect = 0.18
Identities = 30/105 (28%), Positives = 54/105 (51%), Gaps = 5/105 (4%)
Frame = +2
Query: 101 PLPSSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVE-LSNEERNLLSVAYKNV 277
P+ +S + +K E V+R K E A R + M V + + ++NEE + K +
Sbjct: 680 PMQASMENREKME-VERLKRLELATREKLIQKLMTGVIDQVIHGIANEETMKAKIVRKQM 738
Query: 278 VG---ARR-SSWRVISSIEQKTEGSERKQQMAKEYXVKVQKELXE 400
+ AR+ +V E+K + E+++ +AKE +KV+KE+ E
Sbjct: 739 LAIENARKLKEEQVRLENEKKLKRIEQEKNIAKELVLKVEKEISE 783
>Z35595-5|CAA84636.1| 952|Caenorhabditis elegans Hypothetical
protein C01G6.5 protein.
Length = 952
Score = 32.7 bits (71), Expect = 0.23
Identities = 28/99 (28%), Positives = 51/99 (51%), Gaps = 1/99 (1%)
Frame = +2
Query: 71 PFRQGHQ*ISPLPSSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGV-ELSNEER 247
PFR+ SPL + + + R KLAEQA+R V ++GV EL +
Sbjct: 232 PFRKEFD--SPLHNYIYRTSRHSPLYRKKLAEQAQRMAVKNGTF--VNDSGVIELLSHLL 287
Query: 248 NLLSVAYKNVVGARRSSWRVISSIEQKTEGSERKQQMAK 364
+ ++VAY+N+V + +I + +K +GS + ++++
Sbjct: 288 D-INVAYENLV-TKNEKLEIIGTFCEKNKGSFKVDELSR 324
>AF039713-2|AAB96726.2| 476|Caenorhabditis elegans Hypothetical
protein F57B10.9 protein.
Length = 476
Score = 29.9 bits (64), Expect = 1.6
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 9/85 (10%)
Frame = +2
Query: 107 PSSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKN--VV 280
P+ T+++ ++R +L E+ KE E ELS EE+N +S N +
Sbjct: 206 PNMTVAILLSSDIER-RLIEELHIVLREFTDFKEQAEPSTELSKEEKNRISTTISNFLIK 264
Query: 281 GARRSSW-------RVISSIEQKTE 334
G ++ +W RVIS +E E
Sbjct: 265 GGQKIAWGVETTTVRVISRVEDNGE 289
>Z47357-2|CAD54175.1| 464|Caenorhabditis elegans Hypothetical
protein ZK1128.2b protein.
Length = 464
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +2
Query: 269 KNVVGARRSSWRVISSIEQKTEGSERKQQMAKEYXVK 379
KNV+GAR+ +W+ I+ T+G E+ ++A E K
Sbjct: 100 KNVIGARQFNWKFIA-----TDGDEKSVRVAHENVAK 131
>Z70684-1|CAA94597.1| 580|Caenorhabditis elegans Hypothetical
protein F28D1.1 protein.
Length = 580
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/55 (23%), Positives = 27/55 (49%)
Frame = +2
Query: 338 SERKQQMAKEYXVKVQKELXEICYDVLGLLDKHLIPKASNPXSKVFYLKMKGXYY 502
S+RK++ K+ K+Q EL + D + +++ L+ K+ Y++ Y
Sbjct: 464 SQRKEREIKQLLDKIQPELISLNPDDINKVNEGLLELEEEERKKILYIRPMAVQY 518
>AL032630-13|CAA21568.1| 348|Caenorhabditis elegans Hypothetical
protein Y62H9A.13 protein.
Length = 348
Score = 27.9 bits (59), Expect = 6.7
Identities = 17/57 (29%), Positives = 29/57 (50%)
Frame = +2
Query: 215 ETGVELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSERKQQMAKEYXVKVQ 385
+ VELSN+ N + Y V + ++ +S E+KT +E + + EY VK +
Sbjct: 97 DVDVELSNDVSNENPIVYYQKVASSTTNPVYNNSSEEKTHSAENQDNI--EYGVKTE 151
>Z50742-1|CAA90614.2| 605|Caenorhabditis elegans Hypothetical
protein K09A11.1 protein.
Length = 605
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/45 (26%), Positives = 25/45 (55%)
Frame = -2
Query: 253 EVPLLVAKFDAGFRHFLHRGRHVVISLSLFGQFGTLHQFFLVDGH 119
E+P L +++ R L+ HVV+S+ ++ G++ + V G+
Sbjct: 145 ELPKLYQEYEDQLRMELNLAEHVVLSVDIWSDKGSIQEMIGVTGN 189
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,218,689
Number of Sequences: 27780
Number of extensions: 269275
Number of successful extensions: 798
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 753
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 794
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -