Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_E22
(649 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284; Eukary... 286 3e-76
UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5; Eukaryot... 258 1e-67
UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal ... 235 9e-61
UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2; Cyt... 228 8e-59
UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26; Eukaryo... 227 1e-58
UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S riboso... 195 9e-49
UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1; Encephal... 185 9e-46
UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S riboso... 155 1e-36
UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|R... 147 2e-34
UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n... 146 5e-34
UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6; Euryarc... 136 6e-31
UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5; Sulfolo... 134 1e-30
UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n... 131 2e-29
UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7; Archaea... 129 7e-29
UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34; Archae... 127 3e-28
UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length... 121 1e-26
UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus N... 121 2e-26
UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, wh... 120 3e-26
UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3; Halobac... 120 4e-26
UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum l... 115 1e-24
UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured m... 113 5e-24
UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1; Cenarch... 113 5e-24
UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1; Nanoarc... 111 1e-23
UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8; Euthe... 107 2e-22
UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1; ... 106 5e-22
UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep... 105 7e-22
UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n... 105 9e-22
UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 105 9e-22
UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n... 104 2e-21
UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella... 103 5e-21
UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n... 93 5e-18
UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n... 93 7e-18
UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal ... 86 6e-16
UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 ... 86 6e-16
UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 83 7e-15
UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S riboso... 73 8e-12
UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2; Firmicut... 68 2e-10
UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 67 3e-10
UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiel... 67 4e-10
UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3; Fusobact... 67 4e-10
UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3; Mycoplas... 66 5e-10
UniRef50_UPI0000502977 Cluster: UPI0000502977 related cluster; n... 66 9e-10
UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 62 1e-08
UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17; Bacteri... 61 3e-08
UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1; Ch... 59 1e-07
UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32; Bacteri... 59 1e-07
UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2; Deinococ... 59 1e-07
UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S riboso... 58 2e-07
UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast p... 57 3e-07
UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellula... 57 4e-07
UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5; Bacteria... 57 4e-07
UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 56 6e-07
UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6; Bacteria... 56 7e-07
UniRef50_Q50301 Cluster: 30S ribosomal protein S5; n=2; Mycoplas... 56 7e-07
UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole ge... 56 1e-06
UniRef50_UPI000056598D Cluster: UPI000056598D related cluster; n... 55 2e-06
UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n... 53 5e-06
UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellul... 52 2e-05
UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128; Bacter... 51 3e-05
UniRef50_Q7UN03 Cluster: 30S ribosomal protein S5; n=3; Bacteria... 50 6e-05
UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellul... 50 6e-05
UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8; Bacteria... 50 6e-05
UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40; Bacteri... 50 6e-05
UniRef50_Q7MTN0 Cluster: 30S ribosomal protein S5; n=32; Bacteri... 48 3e-04
UniRef50_Q6KI38 Cluster: 30S ribosomal protein S5; n=9; Firmicut... 47 3e-04
UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellula... 47 5e-04
UniRef50_Q82X75 Cluster: 30S ribosomal protein S5; n=11; Bacteri... 46 6e-04
UniRef50_Q8TGP1 Cluster: Uncharacterized protein YGL123C-A; n=1;... 46 8e-04
UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae ... 46 0.001
UniRef50_A6PPX8 Cluster: Ribosomal protein S5; n=4; Bacteria|Rep... 46 0.001
UniRef50_Q4FLN5 Cluster: 30S ribosomal protein S5; n=4; Ricketts... 45 0.001
UniRef50_UPI0001553406 Cluster: PREDICTED: hypothetical protein;... 45 0.002
UniRef50_A0CLK5 Cluster: Chromosome undetermined scaffold_20, wh... 44 0.002
UniRef50_A4S3U8 Cluster: Predicted protein; n=2; Ostreococcus|Re... 44 0.003
UniRef50_Q5L704 Cluster: 30S ribosomal protein S5; n=7; Chlamydi... 43 0.006
UniRef50_UPI000023F324 Cluster: hypothetical protein FG00649.1; ... 42 0.017
UniRef50_Q2GEC2 Cluster: 30S ribosomal protein S5; n=1; Neoricke... 41 0.030
UniRef50_Q7R438 Cluster: GLP_254_52826_53383; n=1; Giardia lambl... 40 0.039
UniRef50_A2RAI1 Cluster: Remark: literature about the mitochondr... 40 0.052
UniRef50_Q5FFR5 Cluster: 30S ribosomal protein S5; n=5; canis gr... 39 0.091
UniRef50_Q8X048 Cluster: Related to ribosomal protein S5; n=1; N... 39 0.12
UniRef50_A4R1A2 Cluster: Putative uncharacterized protein; n=1; ... 38 0.28
UniRef50_Q4EF76 Cluster: Putative uncharacterized protein; n=1; ... 37 0.48
UniRef50_Q2GVX5 Cluster: Putative uncharacterized protein; n=1; ... 37 0.48
UniRef50_P33759 Cluster: 37S ribosomal protein S5, mitochondrial... 35 1.5
UniRef50_UPI0000F2DE4B Cluster: PREDICTED: similar to thioredoxi... 33 7.9
UniRef50_A2AKP6 Cluster: Novel protein; n=12; Murinae|Rep: Novel... 33 7.9
UniRef50_Q1III4 Cluster: Molybdenum cofactor synthesis-like; n=1... 33 7.9
UniRef50_A6S1U3 Cluster: Putative uncharacterized protein; n=2; ... 33 7.9
>UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284;
Eukaryota|Rep: 40S ribosomal protein S2 - Homo sapiens
(Human)
Length = 293
Score = 286 bits (702), Expect = 3e-76
Identities = 135/157 (85%), Positives = 143/157 (91%)
Frame = +3
Query: 177 KEDXKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 356
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIKE EIIDFFLG SL DEVLKIMPVQ
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQ 113
Query: 357 KQTRAGQRTRFXAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRXGYWGNK 536
KQTRAGQRTRF AFVAIGD NGH+GLGVKCSKEVATAIRGAIILAKLS++PVR GYWGNK
Sbjct: 114 KQTRAGQRTRFKAFVAIGDYNGHVGLGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNK 173
Query: 537 IGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPXP 647
IGKPHTVPCKVTG+CGSV VRLIPAPRGTGIVSAP P
Sbjct: 174 IGKPHTVPCKVTGRCGSVLVRLIPAPRGTGIVSAPVP 210
>UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5;
Eukaryota|Rep: 40S ribosomal protein S2 -
Schizosaccharomyces pombe (Fission yeast)
Length = 253
Score = 258 bits (631), Expect = 1e-67
Identities = 112/155 (72%), Positives = 139/155 (89%)
Frame = +3
Query: 177 KEDXKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 356
+++ KEWVPVTKLGRLV+ GKI +E IYL+SLPIKE++I+D+FL P LNDEV+K++PVQ
Sbjct: 28 RDEEKEWVPVTKLGRLVKAGKIKSIEEIYLYSLPIKEYQIVDYFL-PRLNDEVMKVVPVQ 86
Query: 357 KQTRAGQRTRFXAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRXGYWGNK 536
KQTRAGQRTRF AFV IGD++GH+GLG+KC+KEVATAIRGAII+ KLS++P+R GYWG
Sbjct: 87 KQTRAGQRTRFKAFVVIGDSDGHVGLGIKCAKEVATAIRGAIIMGKLSIMPIRRGYWGTA 146
Query: 537 IGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAP 641
+G PHTVP KV+GKCGSVTVRL+PAPRG G+V+AP
Sbjct: 147 LGDPHTVPVKVSGKCGSVTVRLVPAPRGAGLVAAP 181
>UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to ribosomal protein S2 - Macaca mulatta
Length = 272
Score = 235 bits (574), Expect = 9e-61
Identities = 112/139 (80%), Positives = 119/139 (85%)
Frame = +3
Query: 198 VPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQ 377
+PVTKLG L+ + KI LE IYLFSLPIKE EIIDFFLG SL DEVLKIMPVQKQT AGQ
Sbjct: 1 MPVTKLGHLINDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTCAGQ 60
Query: 378 RTRFXAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRXGYWGNKIGKPHTV 557
TRF AFV IGD NGH+GL VKCSKEVATAIRGAIILAKLS++PV GYWGNKIGKPHTV
Sbjct: 61 HTRFKAFVPIGDYNGHVGLSVKCSKEVATAIRGAIILAKLSIVPVCRGYWGNKIGKPHTV 120
Query: 558 PCKVTGKCGSVTVRLIPAP 614
PCKVTG+C SV V LIPAP
Sbjct: 121 PCKVTGRCSSVLVHLIPAP 139
>UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2; n=12;
Eukaryota|Rep: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2 -
Ostreococcus lucimarinus CCE9901
Length = 273
Score = 228 bits (558), Expect = 8e-59
Identities = 104/153 (67%), Positives = 127/153 (83%)
Frame = +3
Query: 180 EDXKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQK 359
+D WVP TKLGRLV++GKI LE I+LFSLPIKE +I++ F+G L DEV+KI PVQK
Sbjct: 45 DDKDVWVPCTKLGRLVQQGKIKSLEHIFLFSLPIKEHQIVEHFIGGELKDEVMKICPVQK 104
Query: 360 QTRAGQRTRFXAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRXGYWGNKI 539
QT AGQR RF AFV +GD NGHIGLGVK KEVA +I+G++ILAKL+++PVR GYWG+K+
Sbjct: 105 QTTAGQRMRFKAFVVVGDCNGHIGLGVKACKEVAHSIQGSMILAKLNIVPVRRGYWGSKL 164
Query: 540 GKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSA 638
G+PHT+P KV GKCGSV VRLIPAPRG GIV++
Sbjct: 165 GEPHTIPTKVHGKCGSVHVRLIPAPRGAGIVAS 197
>UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26;
Eukaryota|Rep: 40S ribosomal protein S2 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 254
Score = 227 bits (556), Expect = 1e-58
Identities = 104/153 (67%), Positives = 126/153 (82%)
Frame = +3
Query: 183 DXKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQ 362
+ K WVPVTKLGRLV+ GKI +E I+L SLP+KEF+IID L P L DEV+ I PVQKQ
Sbjct: 31 EEKGWVPVTKLGRLVKAGKITTIEEIFLHSLPVKEFQIIDTLL-PGLQDEVMNIKPVQKQ 89
Query: 363 TRAGQRTRFXAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRXGYWGNKIG 542
TRAGQRTRF A V +GD+NGH+GLG+K +KEVA AIR II+AKLSV+P+R GYWG +G
Sbjct: 90 TRAGQRTRFKAVVVVGDSNGHVGLGIKTAKEVAGAIRAGIIIAKLSVIPIRRGYWGTNLG 149
Query: 543 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAP 641
+PH++ K TGKCGSVTVRLIPAPRG+GIV++P
Sbjct: 150 QPHSLATKTTGKCGSVTVRLIPAPRGSGIVASP 182
>UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 237
Score = 195 bits (475), Expect = 9e-49
Identities = 92/107 (85%), Positives = 97/107 (90%)
Frame = +3
Query: 327 DEVLKIMPVQKQTRAGQRTRFXAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 506
DEVLKIMPVQKQT AGQRTRF AFVAIGD NGH GLGVKCSKEVATAIR AIILAKLS++
Sbjct: 48 DEVLKIMPVQKQTCAGQRTRFTAFVAIGDYNGHFGLGVKCSKEVATAIREAIILAKLSIV 107
Query: 507 PVRXGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPXP 647
P+R GYWGNKIGKP+TVPCKVTG CGSV V LIPAPRGTG+VSAP P
Sbjct: 108 PLRQGYWGNKIGKPNTVPCKVTGHCGSVLVCLIPAPRGTGMVSAPVP 154
>UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S2 -
Encephalitozoon cuniculi
Length = 242
Score = 185 bits (450), Expect = 9e-46
Identities = 86/153 (56%), Positives = 109/153 (71%)
Frame = +3
Query: 177 KEDXKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 356
+++ EW+P T +GRLV+ KI LE I+ FS I+E EI+D G S+ +EVL I VQ
Sbjct: 15 RKEESEWIPKTAVGRLVKMLKITSLEQIFKFSHVIREPEIVDLLCGNSIKEEVLSIKSVQ 74
Query: 357 KQTRAGQRTRFXAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRXGYWGNK 536
KQTRAGQ+TR A V +GD GH+G+G K SKE A+AIRGAI AK ++ PVR G W
Sbjct: 75 KQTRAGQKTRIKAVVVVGDRKGHVGIGTKASKEAASAIRGAIARAKCAIRPVRLGLWDGA 134
Query: 537 IGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 635
GKPHTV CK +GKCG+ V++IPAPRGTGI+S
Sbjct: 135 QGKPHTVSCKGSGKCGTSVVQVIPAPRGTGIIS 167
>UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 213
Score = 155 bits (375), Expect = 1e-36
Identities = 71/90 (78%), Positives = 78/90 (86%)
Frame = +3
Query: 378 RTRFXAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRXGYWGNKIGKPHTV 557
+ RF AFVAIGD+NG +G GVKCSKE ATAIRGA+ILAKLS+LPV GYWGN+I KPHTV
Sbjct: 61 KIRFKAFVAIGDDNGQVGPGVKCSKEAATAIRGAVILAKLSILPVPRGYWGNEIRKPHTV 120
Query: 558 PCKVTGKCGSVTVRLIPAPRGTGIVSAPXP 647
P KVTG+CGSV VRLIPAPRGTG VSAP P
Sbjct: 121 PGKVTGRCGSVLVRLIPAPRGTGFVSAPVP 150
Score = 33.1 bits (72), Expect = 6.0
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = +3
Query: 183 DXKEWVPVTKLGRLVREGKI 242
+ KEW+PVT LGRLV++ KI
Sbjct: 43 EDKEWIPVTGLGRLVKDMKI 62
>UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|Rep:
Ribosomal protein S2 - Rattus norvegicus (Rat)
Length = 121
Score = 147 bits (356), Expect = 2e-34
Identities = 70/86 (81%), Positives = 75/86 (87%)
Frame = +3
Query: 177 KEDXKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 356
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIKE EIIDFFLG SL DEVLKIMPVQ
Sbjct: 29 KAEDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQ 88
Query: 357 KQTRAGQRTRFXAFVAIGDNNGHIGL 434
KQTRAGQRTRF AFVAIGD NGH+GL
Sbjct: 89 KQTRAGQRTRFKAFVAIGDYNGHVGL 114
>UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC060C UniRef100 entry -
Rattus norvegicus
Length = 206
Score = 146 bits (353), Expect = 5e-34
Identities = 84/149 (56%), Positives = 99/149 (66%)
Frame = +3
Query: 201 PVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQR 380
P +KLG LV++ +I L IYLFSLPIKE EIID FLG +L DEVLK +P QK TR GQ
Sbjct: 51 PASKLGCLVKD-EIKSLGEIYLFSLPIKETEIIDIFLGAALKDEVLKSLPEQKGTRVGQ- 108
Query: 381 TRFXAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRXGYWGNKIGKPHTVP 560
+ GD NGH+ G+ EVA I+ IIL KL ++PV GY G+K KPHTV
Sbjct: 109 -----YYKAGDYNGHVITGL---DEVANTIQRVIILTKLPIVPVWRGYCGSKTSKPHTVL 160
Query: 561 CKVTGKCGSVTVRLIPAPRGTGIVSAPXP 647
CKVTG GSV++ LIPAPR T I SAP P
Sbjct: 161 CKVTGH-GSVSLHLIPAPRDTVISSAPMP 188
>UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S5P -
Methanococcus maripaludis
Length = 225
Score = 136 bits (328), Expect = 6e-31
Identities = 69/155 (44%), Positives = 99/155 (63%), Gaps = 2/155 (1%)
Frame = +3
Query: 177 KEDXKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 356
K + + W P T++GR+V+EG I + I LP+ E EI+D L P L ++VL + VQ
Sbjct: 10 KFNTEAWEPKTQIGRMVKEGTISDISYIMDKGLPLLEPEIVDALL-PDLEEQVLDVKLVQ 68
Query: 357 KQTRAGQRTRFXAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRX--GYWG 530
+ ++G+R R+ A V +G+ NG++G+G+ SKEV AIR AI AKLS++ VR G W
Sbjct: 69 RMHKSGRRARYRATVVVGNKNGYVGVGMGKSKEVGPAIRKAIAHAKLSLIKVRVGCGSWE 128
Query: 531 NKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 635
G PH++P G CGSV V L+PAPRG G+V+
Sbjct: 129 CGCGSPHSIPFTAKGACGSVKVELLPAPRGVGLVA 163
>UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S5P -
Sulfolobus solfataricus
Length = 214
Score = 134 bits (325), Expect = 1e-30
Identities = 68/150 (45%), Positives = 101/150 (67%), Gaps = 2/150 (1%)
Frame = +3
Query: 189 KEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTR 368
+EW P T +G LV+EGKI ++ ++ +LPI E EI+D L P L EV+ I VQKQT
Sbjct: 11 EEWKPRTSIGSLVKEGKISSIKELFDRNLPITEPEIVDVLL-PKLKYEVVDIKVVQKQTD 69
Query: 369 AGQRTRFXAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRX--GYWGNKIG 542
AG+ +R+ V +G+ +G++ +G +K++ AI+ AI AK++++PVR G W G
Sbjct: 70 AGEISRYKVLVIMGNMDGYVSIGTGKAKQLRVAIQKAIRDAKMNIIPVRRGCGSWQCTCG 129
Query: 543 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIV 632
+PH++P KV GK GSV V L+PAP+GTG+V
Sbjct: 130 EPHSLPFKVVGKAGSVEVDLLPAPKGTGLV 159
>UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n=1;
Bos taurus|Rep: UPI000057EB46 UniRef100 entry - Bos
Taurus
Length = 258
Score = 131 bits (316), Expect = 2e-29
Identities = 75/152 (49%), Positives = 95/152 (62%)
Frame = +3
Query: 192 EWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRA 371
+W+P+TKLG LV+E KI LE IY FSL + + F P+ KQT
Sbjct: 53 KWLPITKLGCLVKEMKIKSLEEIYFFSLLSRNLRSLTFSWEH----------PLIKQTCT 102
Query: 372 GQRTRFXAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRXGYWGNKIGKPH 551
Q+TRF A V +G + GH+ LG+K S EVA IILAKLS++PV G ++ +PH
Sbjct: 103 DQQTRFKASVTVG-SYGHVSLGIKYSMEVA------IILAKLSIIPVETATGGKRL-EPH 154
Query: 552 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPXP 647
VPC+VTG+CGS+ V LIPAPRGTG VSAP P
Sbjct: 155 MVPCRVTGRCGSLLVHLIPAPRGTGTVSAPVP 186
>UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7;
Archaea|Rep: 30S ribosomal protein S5P - Picrophilus
torridus
Length = 221
Score = 129 bits (311), Expect = 7e-29
Identities = 63/149 (42%), Positives = 94/149 (63%), Gaps = 2/149 (1%)
Frame = +3
Query: 189 KEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTR 368
+EW P T+LGRLV G+I + LP+KE++I+D+ + P L DEV+ I Q+ T
Sbjct: 3 EEWTPRTELGRLVANGEIKTISEALHSKLPLKEYQIVDYLI-PDLKDEVINIERAQRMTD 61
Query: 369 AGQRTRFXAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRX--GYWGNKIG 542
+G+R + +G+ NG++G+G +KE A AI+ AI AKL+++ ++ G W G
Sbjct: 62 SGRRMNYSITAVVGNGNGYVGVGRGKAKEAAPAIKKAIDNAKLNIIEIKRGCGSWECGCG 121
Query: 543 KPHTVPCKVTGKCGSVTVRLIPAPRGTGI 629
KPHT+P V GK GSV+V L PAP+G G+
Sbjct: 122 KPHTLPFLVNGKSGSVSVTLKPAPQGVGL 150
>UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34;
Archaea|Rep: 30S ribosomal protein S5P - Pyrococcus
furiosus
Length = 236
Score = 127 bits (306), Expect = 3e-28
Identities = 70/153 (45%), Positives = 94/153 (61%), Gaps = 6/153 (3%)
Frame = +3
Query: 192 EWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLN----DEVLKIMPVQK 359
EW P TKLG +V+EG+I + I+ IKE EIID L P +N EVL I +
Sbjct: 15 EWEPKTKLGMMVKEGQITDIHEIFRRGYQIKEPEIIDVLL-PEVNARENQEVLDIALTVR 73
Query: 360 QTRAGQRTRFXAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRX--GYWGN 533
T +G+R RF A+G+ +G++GLG+ KEV AIR AI AKL+++ ++ G W
Sbjct: 74 MTDSGRRVRFRVLAAVGNRDGYVGLGIGHGKEVGIAIRKAINYAKLNIIEIKRGCGSWEC 133
Query: 534 KIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIV 632
+ +PH+VP V GK GSV VRLIP PRG G+V
Sbjct: 134 RCRRPHSVPFAVEGKEGSVRVRLIPGPRGLGLV 166
>UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length
enriched library, clone:1200003H09 product:ribosomal
protein S2, full insert sequence; n=13; Eutheria|Rep:
Adult male lung cDNA, RIKEN full-length enriched
library, clone:1200003H09 product:ribosomal protein S2,
full insert sequence - Mus musculus (Mouse)
Length = 235
Score = 121 bits (292), Expect = 1e-26
Identities = 58/71 (81%), Positives = 62/71 (87%)
Frame = +3
Query: 177 KEDXKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 356
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIKE EIIDFFLG SL DEVLKIMPVQ
Sbjct: 54 KAEDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQ 113
Query: 357 KQTRAGQRTRF 389
KQTRAGQRTRF
Sbjct: 114 KQTRAGQRTRF 124
Score = 56.4 bits (130), Expect = 6e-07
Identities = 25/28 (89%), Positives = 26/28 (92%)
Frame = +3
Query: 564 KVTGKCGSVTVRLIPAPRGTGIVSAPXP 647
KVTG+CGSV VRLIPAPRGTGIVSAP P
Sbjct: 125 KVTGRCGSVLVRLIPAPRGTGIVSAPVP 152
>UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein S5
- Candidatus Nitrosopumilus maritimus SCM1
Length = 238
Score = 121 bits (291), Expect = 2e-26
Identities = 68/149 (45%), Positives = 90/149 (60%), Gaps = 2/149 (1%)
Frame = +3
Query: 195 WVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAG 374
WVP T LG+ V G+I LE I L I+E II L P L EV+ + +QK T G
Sbjct: 46 WVPKTILGQKVASGEISSLEEIIELGLRIQEAGIIKKLL-PDLKSEVVDVGIIQKMTSNG 104
Query: 375 QRTRFXAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRX--GYWGNKIGKP 548
Q TRF A VA G+ NG++G+G SK++ AI A A L+V P++ G W + +
Sbjct: 105 QSTRFKAIVATGNENGYLGIGQGKSKQMRIAIEKATNAAYLNVNPIKMGCGSWECRCDQK 164
Query: 549 HTVPCKVTGKCGSVTVRLIPAPRGTGIVS 635
H+VP KV GK GSVT+ +IPAPRG G+V+
Sbjct: 165 HSVPFKVKGKGGSVTIEIIPAPRGLGLVA 193
>UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_75,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 327
Score = 120 bits (289), Expect = 3e-26
Identities = 58/95 (61%), Positives = 76/95 (80%)
Frame = +3
Query: 189 KEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTR 368
+EWVP+TKLGRLV+ GKI LE+I+ FS+PIKE++I+D FL +L +E L I PVQKQT
Sbjct: 62 QEWVPLTKLGRLVKGGKIKSLETIFQFSIPIKEYQIVDHFL-KTLKEEPLAIGPVQKQTC 120
Query: 369 AGQRTRFXAFVAIGDNNGHIGLGVKCSKEVATAIR 473
AGQ+TRF A+V +GD++ HIGLG K +KEV AI+
Sbjct: 121 AGQKTRFKAYVVVGDSHQHIGLGWKSAKEVQGAIQ 155
Score = 36.3 bits (80), Expect = 0.64
Identities = 18/47 (38%), Positives = 22/47 (46%)
Frame = +2
Query: 488 C*AVSSTSPXRLLG*QDRKATHRPLQGHRQVWFRNSPADSCPSWYWY 628
C +S R+LG QDR TH P+Q R+ S S YWY
Sbjct: 163 CQTQFDSSQKRILGKQDRLTTHSPMQSDRKGRISQSQIGSSTQRYWY 209
>UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3;
Halobacteriaceae|Rep: 30S ribosomal protein S5P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 212
Score = 120 bits (288), Expect = 4e-26
Identities = 64/147 (43%), Positives = 89/147 (60%), Gaps = 2/147 (1%)
Frame = +3
Query: 195 WVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAG 374
W P T+LG+ V EG+ID ++ LP+KE E++D + P L DEVL I VQ+ T +G
Sbjct: 7 WEPRTRLGKQVVEGEIDSMQEALNSGLPLKESEVVDQLV-PDLEDEVLDINMVQRMTDSG 65
Query: 375 QRTRFXAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRX--GYWGNKIGKP 548
+R +F VA+G+ +G IG +V AI+ AI +AKL+++ V G W G+P
Sbjct: 66 RRVKFRCVVAVGNRDGLIGYAEGRDDQVGGAIQKAIDIAKLNIIDVSRGCGSWECGCGRP 125
Query: 549 HTVPCKVTGKCGSVTVRLIPAPRGTGI 629
HTV + GK GSV V L PAPRG G+
Sbjct: 126 HTVALRTEGKAGSVEVELQPAPRGLGL 152
>UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S5 -
Halorubrum lacusprofundi ATCC 49239
Length = 265
Score = 115 bits (276), Expect = 1e-24
Identities = 62/150 (41%), Positives = 91/150 (60%), Gaps = 2/150 (1%)
Frame = +3
Query: 195 WVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAG 374
W P T+LGR V+ G I +E LP+KE EI+D L P L DEVL I VQ+ T +G
Sbjct: 58 WEPRTRLGRKVQNGDISSMEQALDSGLPLKEAEIVDQLL-PGLEDEVLDINMVQRMTDSG 116
Query: 375 QRTRFXAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPV--RXGYWGNKIGKP 548
+R +F VA+G+ +G++G +V AI+ AI +AKL+++ V G W ++ G
Sbjct: 117 RRVKFRCVVAVGNRDGYLGYAQARDDQVGGAIQKAIDVAKLNIIEVDRGSGSWEDQPGGT 176
Query: 549 HTVPCKVTGKCGSVTVRLIPAPRGTGIVSA 638
+++ K GK GSVTV + PAP+G G+ +A
Sbjct: 177 NSLTRKAEGKAGSVTVEIQPAPQGLGLAAA 206
>UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured
marine group II euryarchaeote DeepAnt-JyKC7|Rep:
Ribosomal protein S5 - uncultured marine group II
euryarchaeote DeepAnt-JyKC7
Length = 202
Score = 113 bits (271), Expect = 5e-24
Identities = 59/139 (42%), Positives = 87/139 (62%), Gaps = 2/139 (1%)
Frame = +3
Query: 222 LVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFXAFV 401
+V +GKI E LPI+E EI+D L P L+D+VL + +Q+ T +G+R RF
Sbjct: 1 MVADGKILSYEEALATGLPIREVEIVDALL-PGLDDDVLAVNMIQRMTDSGRRVRFNVLC 59
Query: 402 AIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVR--XGYWGNKIGKPHTVPCKVTG 575
+G+++G++GL + KEVA+ IR AI AKL+++PV G W + G +VP K+TG
Sbjct: 60 VVGNSDGYVGLAICKGKEVASTIRKAIDKAKLNMIPVMRGNGSWESGGGPGTSVPLKITG 119
Query: 576 KCGSVTVRLIPAPRGTGIV 632
+ GS V L+PAP G G+V
Sbjct: 120 RSGSTRVTLMPAPAGKGLV 138
>UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1;
Cenarchaeum symbiosum|Rep: 30S ribosomal protein S5P -
Cenarchaeum symbiosum
Length = 219
Score = 113 bits (271), Expect = 5e-24
Identities = 64/149 (42%), Positives = 88/149 (59%), Gaps = 2/149 (1%)
Frame = +3
Query: 195 WVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAG 374
WVP T LG+ V G+I LE I I+E II L P L EV+ + +QK T G
Sbjct: 27 WVPKTALGKRVNAGEITSLEEIQEAGARIQESGIIKKLL-PDLKTEVVDVGIIQKMTSNG 85
Query: 375 QRTRFXAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRX--GYWGNKIGKP 548
Q TRF A VA G+ NG++G+G +K++ AI A A L+V P++ G W + +
Sbjct: 86 QSTRFKAIVAAGNENGYLGIGQGKAKQMRIAIEKANNQALLNVGPIKLGCGSWECRCDQK 145
Query: 549 HTVPCKVTGKCGSVTVRLIPAPRGTGIVS 635
H+VP KV GK GSV + ++PAPRG G+V+
Sbjct: 146 HSVPFKVRGKGGSVVIEILPAPRGLGLVA 174
>UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S5P -
Nanoarchaeum equitans
Length = 231
Score = 111 bits (267), Expect = 1e-23
Identities = 66/164 (40%), Positives = 93/164 (56%), Gaps = 15/164 (9%)
Frame = +3
Query: 189 KEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPV----- 353
+EW P TKLGRLV+EGKI ++ I I+E EI+D L P+L E +K +
Sbjct: 5 EEWQPKTKLGRLVKEGKITNIDEILSNKYVIREPEIVDVLL-PNLEVEFMKWRIIRGKFR 63
Query: 354 --------QKQTRAGQRTRFXAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLP 509
QK+T G +TR+ +GD +GH+G+G+ S ++ A AI AKL+++
Sbjct: 64 SKKPYRMAQKKTAEGNKTRYEVIAIVGDKDGHVGVGLGRSSDLLIAREKAINRAKLNIIK 123
Query: 510 VRX--GYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 635
V G W G PH++P +V GK GSV V L PAP+G GIV+
Sbjct: 124 VARGCGSWECACGAPHSIPYQVEGKSGSVRVILKPAPKGVGIVA 167
>UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8;
Eutheria|Rep: ribosomal protein S2 - Rattus norvegicus
Length = 233
Score = 107 bits (257), Expect = 2e-22
Identities = 52/71 (73%), Positives = 57/71 (80%)
Frame = +3
Query: 177 KEDXKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 356
K + KEW+P TKLG LV++ KI LE IYLFSLPIK EIIDFFLG SL +EVLK MPVQ
Sbjct: 54 KAEDKEWIPFTKLGHLVKDMKIKSLEEIYLFSLPIKGSEIIDFFLGASLKNEVLKTMPVQ 113
Query: 357 KQTRAGQRTRF 389
KQTRAGQ TRF
Sbjct: 114 KQTRAGQWTRF 124
Score = 51.6 bits (118), Expect = 2e-05
Identities = 23/28 (82%), Positives = 24/28 (85%)
Frame = +3
Query: 564 KVTGKCGSVTVRLIPAPRGTGIVSAPXP 647
KVTG+CGSV VRL APRGTGIVSAP P
Sbjct: 125 KVTGRCGSVLVRLFSAPRGTGIVSAPVP 152
>UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 181
Score = 106 bits (254), Expect = 5e-22
Identities = 57/131 (43%), Positives = 83/131 (63%)
Frame = -3
Query: 569 DLARDGVWLSYLVTPVTXSDW*N*QLSKDNSASNGSGDFLAALHTQTNMTVVVANGNKCX 390
+LA GV + LVTPV + N QL +D+S ++G G FLAAL QT++ V V +G++
Sbjct: 18 NLAGHGVGFTDLVTPVASTHRNNGQLGQDDSPTDGGGHFLAALDAQTDVAVAVTDGDEGL 77
Query: 389 ETCALSGTCLFLYRHDLKNLIIQGRAEEEINDLEFFDW*RKQVNALEFVDFSFANKAAEF 210
E L+GT L L HDL++ ++Q A+EEI+DLE F+ R QV+ L+ D + A++A +
Sbjct: 78 EARTLTGTGLLLDGHDLQHFVLQRAAQEEIDDLELFNGQRVQVDLLQGADLAIAHQATQL 137
Query: 209 GDRNPLFXVFL 177
G NP VFL
Sbjct: 138 GHWNPFLRVFL 148
>UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep:
MGC27348 protein - Homo sapiens (Human)
Length = 172
Score = 105 bits (253), Expect = 7e-22
Identities = 52/65 (80%), Positives = 55/65 (84%)
Frame = +3
Query: 237 KIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFXAFVAIGDN 416
KI LE IYLFSLPIKE EIIDFFLG SL DEVLKIMPV+K+TRAGQRTRF AFVAI D
Sbjct: 2 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVRKETRAGQRTRFKAFVAIRDY 61
Query: 417 NGHIG 431
NG+ G
Sbjct: 62 NGYAG 66
Score = 44.8 bits (101), Expect = 0.002
Identities = 25/55 (45%), Positives = 29/55 (52%)
Frame = +2
Query: 410 RQQRSYWFGCEVQQGSRHCHSRRYYPC*AVSSTSPXRLLG*QDRKATHRPLQGHR 574
R Y EV QG H R ++P A+ RLLG QDR+A HRPLQG R
Sbjct: 59 RDYNGYAGRVEVLQGGGRRHPRGHHPDQALHCHRAQRLLGEQDRQAPHRPLQGDR 113
>UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC004A UniRef100 entry -
Rattus norvegicus
Length = 173
Score = 105 bits (252), Expect = 9e-22
Identities = 73/158 (46%), Positives = 86/158 (54%), Gaps = 1/158 (0%)
Frame = +3
Query: 177 KEDXKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 356
K + K WV + LG LV+E KI LES FS +II+FFLG L DEVL+ M Q
Sbjct: 18 KAEDKAWVFINNLGCLVKE-KIKSLESCSPFS----SSDIIEFFLGEHLKDEVLRTMLAQ 72
Query: 357 KQTRAGQRTRFXAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRXGYWGNK 536
Q RTR F + + L V CSKEV TA + AI L + + GY GNK
Sbjct: 73 NQ-----RTRIKVFFFLTIRSPMTTL-VNCSKEVGTAAQRAITLLSF-LFSTQTGYKGNK 125
Query: 537 IGKPHTVPCKVTG-KCGSVTVRLIPAPRGTGIVSAPXP 647
IG PHT+PC VT + V V L APRGTG VSA P
Sbjct: 126 IGNPHTIPCDVTATEKNLVLVCLTTAPRGTGTVSASVP 163
>UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome F of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 262
Score = 105 bits (252), Expect = 9e-22
Identities = 58/149 (38%), Positives = 90/149 (60%)
Frame = -3
Query: 641 WRRHNTSTTRGRNQPDCYGTTLAGDLARDGVWLSYLVTPVTXSDW*N*QLSKDNSASNGS 462
W +T T+ NQ + GTTL L GV L+ + TPVT SDW N QL D++ S+G+
Sbjct: 75 WGGDDTGTSWSWNQSNGNGTTLTRGLGSQGVRLTQVGTPVTSSDWDNGQLGDDDTGSDGT 134
Query: 461 GDFLAALHTQTNMTVVVANGNKCXETCALSGTCLFLYRHDLKNLIIQGRAEEEINDLEFF 282
+FL+ L+TQT++TV V N + E+ +L+ + L L R D+ N I+Q ++ +NDLEF
Sbjct: 135 SNFLSGLNTQTDVTVGVTNDDDSLESGSLTSSGLLLDRLDVHNFILQ-VWQQLVNDLEFL 193
Query: 281 DW*RKQVNALEFVDFSFANKAAEFGDRNP 195
DW R Q + + D + +++ + G+ NP
Sbjct: 194 DWQRVQEDFFDGRDLAGLHQSTQLGNWNP 222
>UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB449D UniRef100
entry - Canis familiaris
Length = 196
Score = 104 bits (250), Expect = 2e-21
Identities = 59/116 (50%), Positives = 73/116 (62%)
Frame = +3
Query: 300 DFFLGPSLNDEVLKIMPVQKQTRAGQRTRFXAFVAIGDNNGHIGLGVKCSKEVATAIRGA 479
D L ++ + ++I +K+T AGQ+TRF AFV D NGH+ L EVATAIRGA
Sbjct: 1 DMSLLAAVKGKGIRIKSYKKKTHAGQQTRFKAFVVFRDYNGHVSL------EVATAIRGA 54
Query: 480 IILAKLSVLPVRXGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPXP 647
IIL + S+ G+ GNKI KPHTV C+VT SV V I APRGT I+SAP P
Sbjct: 55 IILDRSSIAIAWGGWSGNKIAKPHTVSCRVTRLYCSVLVHHISAPRGTDILSAPVP 110
>UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella
natans|Rep: Ribosomal protein S2 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 266
Score = 103 bits (246), Expect = 5e-21
Identities = 48/130 (36%), Positives = 83/130 (63%)
Frame = +3
Query: 249 LESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFXAFVAIGDNNGHI 428
L+ ++L + ++++ G SL +V++ + V + T++G++ + V +GD +GH+
Sbjct: 84 LDYLFLKRIFFHNNKLVNILFGKSLKYKVIQNLMVSRLTKSGRQYKKKVAVLVGDLDGHV 143
Query: 429 GLGVKCSKEVATAIRGAIILAKLSVLPVRXGYWGNKIGKPHTVPCKVTGKCGSVTVRLIP 608
GLGVK S + I+ A+ AKL++ +R GYW + GKP+T+ K +GK GSV V + P
Sbjct: 144 GLGVKSSMDSKAGIKAALRKAKLAITKIRRGYWEIEEGKPNTIKYKTSGKAGSVVVCIKP 203
Query: 609 APRGTGIVSA 638
AP+GTGIV++
Sbjct: 204 APKGTGIVAS 213
>UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n=1;
Mus musculus|Rep: UPI0000D62CF0 UniRef100 entry - Mus
musculus
Length = 215
Score = 93.1 bits (221), Expect = 5e-18
Identities = 63/126 (50%), Positives = 78/126 (61%)
Frame = +3
Query: 198 VPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQ 377
+PVTKLG LV++ KI L P+KEFEI DFFL SL D+VLKI+P+ + R Q
Sbjct: 1 IPVTKLGCLVKDIKIKYL--------PVKEFEINDFFLEASLKDKVLKIIPLSR-FRNDQ 51
Query: 378 RTRFXAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRXGYWGNKIGKPHTV 557
TRF +F I + GH G+GVKCSK+V TA+ + + LS R Y GN I KP T
Sbjct: 52 WTRFNSFDTI-NYGGHNGIGVKCSKKVGTAVGLSSWSSFLSSCLPR-DYCGNNIRKP-TY 108
Query: 558 PCKVTG 575
PCK TG
Sbjct: 109 PCKRTG 114
>UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DBFACC UniRef100 entry -
Rattus norvegicus
Length = 172
Score = 92.7 bits (220), Expect = 7e-18
Identities = 49/96 (51%), Positives = 59/96 (61%)
Frame = +3
Query: 354 QKQTRAGQRTRFXAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRXGYWGN 533
QKQT+ GQ+ R F GD NGH+GLG+KCSKEVATA +G + +L
Sbjct: 1 QKQTQTGQKNRLKTFCCYGDYNGHVGLGIKCSKEVATAFQGLWVKMQLG---------ET 51
Query: 534 KIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAP 641
++ + V KVT GSV V LIPAPRGTGIVSAP
Sbjct: 52 RLSRSTLVQYKVTSHYGSVLVHLIPAPRGTGIVSAP 87
>UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Pan troglodytes|Rep: PREDICTED: similar
to ribosomal protein S2 - Pan troglodytes
Length = 223
Score = 86.2 bits (204), Expect = 6e-16
Identities = 45/93 (48%), Positives = 63/93 (67%)
Frame = +3
Query: 225 VREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFXAFVA 404
V++ K+ L+ +YLFSLPIKEFE+ DF LG L D+VLK+M VQKQ +AG+R RF V
Sbjct: 132 VKDMKMKSLK-VYLFSLPIKEFEVTDFLLGVPLKDKVLKLMFVQKQPKAGRRIRFKVIVT 190
Query: 405 IGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV 503
I D N ++ LGV+ KE+ A+ +L+ + V
Sbjct: 191 IRDCNDNVSLGVEWPKELLIAVCRTNVLSIILV 223
>UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 -
Mus musculus (Mouse); n=3; Murinae|Rep: RBM27_MOUSE
Isoform 2 of Q5SFM8 - Mus musculus (Mouse) - Rattus
norvegicus
Length = 266
Score = 86.2 bits (204), Expect = 6e-16
Identities = 68/155 (43%), Positives = 81/155 (52%)
Frame = +3
Query: 183 DXKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQ 362
+ K+W+PV KL LVR + L FSL K+ II FFL SL DE IMPVQ Q
Sbjct: 59 EDKQWMPVIKLCHLVRTWRYRDLP----FSLLNKKSMIIGFFLRTSLRDE---IMPVQTQ 111
Query: 363 TRAGQRTRFXAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRXGYWGNKIG 542
T R F FV+I D + H+ L KCSK+ AT AI+L R G
Sbjct: 112 TWLPSRP-FKDFVSIRDYSSHVDLDDKCSKKTAT----AIVLVWKGTRETRLG------- 159
Query: 543 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPXP 647
TV CKVTG+C SV + LIP R I+SAP P
Sbjct: 160 -SLTVSCKVTGQCVSVLICLIPPTR--NIISAPVP 191
>UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 136
Score = 82.6 bits (195), Expect = 7e-15
Identities = 40/78 (51%), Positives = 54/78 (69%)
Frame = +3
Query: 201 PVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQR 380
PVTKLGRLV++GK+ ++ I+ F + IKE++I+D L L +EV+ I VQKQT G+
Sbjct: 36 PVTKLGRLVKDGKVKSIDQIFEFGIKIKEYQIVDHLLS-RLKEEVMTIDQVQKQTSRGKE 94
Query: 381 TRFXAFVAIGDNNGHIGL 434
R A VAIGD+NGH L
Sbjct: 95 PRLKASVAIGDHNGHRAL 112
>UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 170
Score = 72.5 bits (170), Expect = 8e-12
Identities = 41/84 (48%), Positives = 53/84 (63%)
Frame = +3
Query: 237 KIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFXAFVAIGDN 416
KI L+ +YLFS PIKEFE+ DF L L D+VLK+M V+KQ AG+ RF V I
Sbjct: 2 KIKSLK-VYLFSRPIKEFEVTDFLLEVPLKDKVLKLMFVKKQPEAGRWIRFKVIVTIRYC 60
Query: 417 NGHIGLGVKCSKEVATAIRGAIIL 488
N ++ LGV+ KE+ A+ IIL
Sbjct: 61 NDNVSLGVERPKELLIAVCRTIIL 84
>UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2;
Firmicutes|Rep: 30S ribosomal protein S5 - Ureaplasma
parvum (Ureaplasma urealyticum biotype 1)
Length = 203
Score = 67.7 bits (158), Expect = 2e-10
Identities = 40/106 (37%), Positives = 59/106 (55%)
Frame = +3
Query: 318 SLNDEVLKIMPVQKQTRAGQRTRFXAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 497
+ + V+KI + K T+ G+ RF A V IGD NG +G G+ S EV AI+ AI A
Sbjct: 48 NFEERVVKIKRISKTTKGGRMMRFSALVVIGDKNGTVGFGMGKSIEVPDAIKKAIKNANN 107
Query: 498 SVLPVRXGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 635
+++ V K K ++ V G+ G+ V L+PAP GTGI++
Sbjct: 108 NLIKV-------KQTKKGSIYHDVNGRHGAAKVMLLPAPEGTGIIA 146
>UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Oceanobacillus
iheyensis
Length = 167
Score = 67.3 bits (157), Expect = 3e-10
Identities = 38/105 (36%), Positives = 60/105 (57%)
Frame = +3
Query: 321 LNDEVLKIMPVQKQTRAGQRTRFXAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 500
L + V+ + V K + G+R RF A V +GD NGH+G G ++EV AI+ A+ AK +
Sbjct: 12 LEERVVTVNRVAKVVKGGRRFRFAALVVVGDKNGHVGFGTGKAQEVPEAIKKAVDDAKKN 71
Query: 501 VLPVRXGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 635
++ V +G T+P ++ G+ GS V + PA GTG++S
Sbjct: 72 LISVPI------VGT--TIPHEIHGQFGSGNVLMKPAAEGTGVIS 108
>UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiella
natans|Rep: Ribosomal protein rpS5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 219
Score = 66.9 bits (156), Expect = 4e-10
Identities = 37/108 (34%), Positives = 61/108 (56%)
Frame = +3
Query: 312 GPSLNDEVLKIMPVQKQTRAGQRTRFXAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 491
GP ++VL++ + K + G+ F A VA+GD NG IGLG +KEV A+ A + A
Sbjct: 68 GPRFEEKVLQVRRITKVVKGGKNMGFRALVAVGDKNGKIGLGCASAKEVMVAVEKASMEA 127
Query: 492 KLSVLPVRXGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 635
K + + V I K +++P ++ + G+ +V + PA GTG+V+
Sbjct: 128 KKTAITV-------PITKDYSLPHRLDVEWGAASVMMKPASVGTGLVA 168
>UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3;
Fusobacterium nucleatum|Rep: 30S ribosomal protein S5 -
Fusobacterium nucleatum subsp. nucleatum
Length = 164
Score = 66.9 bits (156), Expect = 4e-10
Identities = 36/103 (34%), Positives = 58/103 (56%)
Frame = +3
Query: 327 DEVLKIMPVQKQTRAGQRTRFXAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 506
+++LKI V K T+ G+ F A+GD G IGLG+ + V AIR AI AK +++
Sbjct: 11 EKLLKISRVSKTTKGGRTISFSVLAAVGDGEGKIGLGLGKANGVPDAIRKAIAAAKKNIV 70
Query: 507 PVRXGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 635
+ K +T+P ++ GK G+ T+ + PA GTG+++
Sbjct: 71 KISL--------KNNTIPHEIAGKWGATTLWMAPAYEGTGVIA 105
>UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3;
Mycoplasma|Rep: 30S ribosomal protein S5 - Mycoplasma
penetrans
Length = 234
Score = 66.5 bits (155), Expect = 5e-10
Identities = 37/105 (35%), Positives = 60/105 (57%)
Frame = +3
Query: 321 LNDEVLKIMPVQKQTRAGQRTRFXAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 500
L ++++ + + K T+ G+ RF A IGD G++G G+ S EV AIR A+ AK +
Sbjct: 78 LEEKIVGVKKISKTTKGGRNMRFSALAVIGDRKGNVGFGLGKSIEVPVAIRKALKSAKNN 137
Query: 501 VLPVRXGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 635
+ V K+ K T+ +V GK G+ V + PAP+GTG+++
Sbjct: 138 MYKV-------KMNKNFTLYHEVIGKHGAGKVLIKPAPKGTGVIA 175
>UniRef50_UPI0000502977 Cluster: UPI0000502977 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000502977 UniRef100 entry -
Rattus norvegicus
Length = 140
Score = 65.7 bits (153), Expect = 9e-10
Identities = 31/40 (77%), Positives = 31/40 (77%)
Frame = +3
Query: 528 GNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPXP 647
GNKIGK H V CKVTG CGSV V LIPA RGTGI SAP P
Sbjct: 7 GNKIGKTHIVLCKVTGCCGSVLVHLIPAHRGTGISSAPVP 46
>UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Onion yellows
phytoplasma
Length = 171
Score = 61.7 bits (143), Expect = 1e-08
Identities = 39/107 (36%), Positives = 55/107 (51%)
Frame = +3
Query: 315 PSLNDEVLKIMPVQKQTRAGQRTRFXAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 494
P L ++V+KI + K + G R RF A V +GD G IG +KE+ AI+ A+ AK
Sbjct: 13 PLLEEKVVKINRITKVVKGGARFRFSALVVVGDKKGQIGFATAKAKEIVEAIKKALEKAK 72
Query: 495 LSVLPVRXGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 635
+ VR G T+P G+ G+ L PA +GTGIV+
Sbjct: 73 KQL--VRIPITGT------TIPHDTIGRFGASKFFLKPASKGTGIVA 111
>UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17;
Bacteria|Rep: 30S ribosomal protein S5 - Leptospira
interrogans
Length = 187
Score = 60.9 bits (141), Expect = 3e-08
Identities = 37/104 (35%), Positives = 56/104 (53%)
Frame = +3
Query: 324 NDEVLKIMPVQKQTRAGQRTRFXAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV 503
+++V+KI V K + G+R F A +GD G +G+G + EV AIR +I AK +
Sbjct: 31 SEKVVKIDRVAKVVKGGRRFSFNALSVVGDQRGKVGIGFGKANEVPDAIRKSIESAKKHL 90
Query: 504 LPVRXGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 635
+ + K HT+P +V GK S V L P+ GTGI++
Sbjct: 91 VKINF--------KGHTIPHEVIGKFKSARVILKPSTAGTGIIA 126
>UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1;
Chlamydomonas reinhardtii|Rep: Ribosomal protein S5
precursor - Chlamydomonas reinhardtii
Length = 673
Score = 58.8 bits (136), Expect = 1e-07
Identities = 34/112 (30%), Positives = 61/112 (54%)
Frame = +3
Query: 300 DFFLGPSLNDEVLKIMPVQKQTRAGQRTRFXAFVAIGDNNGHIGLGVKCSKEVATAIRGA 479
DF G + + ++++ V K + G+ F IG+ NG +G+G + +EVATA++ A
Sbjct: 506 DFDDGENWQERIIELSRVTKVVKGGKLMGFRCTAIIGNGNGLVGVGCQAGREVATAVKRA 565
Query: 480 IILAKLSVLPVRXGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 635
++ AK SV+ V +G T+P +V K + ++PA GTG+++
Sbjct: 566 LVDAKKSVVRVPL------VG-AGTIPHRVEAKFNAARCVMVPAADGTGVLA 610
>UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32;
Bacteria|Rep: 30S ribosomal protein S5 - Mesoplasma
florum (Acholeplasma florum)
Length = 206
Score = 58.8 bits (136), Expect = 1e-07
Identities = 37/110 (33%), Positives = 57/110 (51%)
Frame = +3
Query: 306 FLGPSLNDEVLKIMPVQKQTRAGQRTRFXAFVAIGDNNGHIGLGVKCSKEVATAIRGAII 485
F ++V+ I V K T+ G+ RF A V +GD G +GLG + EV AI+ A+
Sbjct: 38 FQKDDFEEKVVTIRRVTKVTKGGRHFRFAAVVVVGDKKGQVGLGTGKANEVPEAIKKAVK 97
Query: 486 LAKLSVLPVRXGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 635
AK +++ V + TVP +V G G+ V + PA GTG+++
Sbjct: 98 EAKKNLIRVPL--------RGTTVPHEVIGHFGAGQVLIKPAKPGTGVIA 139
>UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2;
Deinococcus|Rep: 30S ribosomal protein S5 - Deinococcus
radiodurans
Length = 196
Score = 58.8 bits (136), Expect = 1e-07
Identities = 35/109 (32%), Positives = 59/109 (54%), Gaps = 2/109 (1%)
Frame = +3
Query: 327 DEVLKIMPVQKQTRAGQRTRFXAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 506
+++L + K + G+R RF A V +GD NG +G+G+ +KEV AI A +A+ +++
Sbjct: 19 EKMLFVNRTSKTYQGGRRFRFAALVILGDRNGRVGMGIGKAKEVPVAIEKAKAVARKNMI 78
Query: 507 --PVRXGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPXP 647
PV G T+P ++ G+ + V L PA GTG+++ P
Sbjct: 79 TVPVENG----------TIPHEIVGENSTSRVLLKPAGPGTGVIAGTVP 117
>UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 181
Score = 58.0 bits (134), Expect = 2e-07
Identities = 26/36 (72%), Positives = 30/36 (83%)
Frame = +3
Query: 177 KEDXKEWVPVTKLGRLVREGKIDKLESIYLFSLPIK 284
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIK
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIK 89
>UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast
precursor; n=12; cellular organisms|Rep: 30S ribosomal
protein S5, chloroplast precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 303
Score = 57.2 bits (132), Expect = 3e-07
Identities = 31/103 (30%), Positives = 57/103 (55%)
Frame = +3
Query: 327 DEVLKIMPVQKQTRAGQRTRFXAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 506
+ V+++ V K + G++ +F A V +GD G++G+G +KEV A++ + I A+ +++
Sbjct: 149 ERVVQVRRVTKVVKGGKQLKFRAIVVVGDKQGNVGVGCAKAKEVVAAVQKSAIDARRNIV 208
Query: 507 PVRXGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 635
V + K T P + G G+ V L PA GTG+++
Sbjct: 209 QV-------PMTKYSTFPHRSEGDYGAAKVMLRPASPGTGVIA 244
>UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellular
organisms|Rep: 30S ribosomal protein S5 - Gloeobacter
violaceus
Length = 223
Score = 56.8 bits (131), Expect = 4e-07
Identities = 29/103 (28%), Positives = 58/103 (56%)
Frame = +3
Query: 327 DEVLKIMPVQKQTRAGQRTRFXAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 506
+ V++I V K + G++ F A + +GD NG +G+GV + +V A++ + A+ +++
Sbjct: 68 ERVVQIRRVTKVVKGGKKLSFRAVIVVGDGNGRVGVGVGKANDVIGAVKKGVSDARKALI 127
Query: 507 PVRXGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 635
V + K +++P ++G G+ V L PA GTG+++
Sbjct: 128 RV-------PLNKINSIPHPMSGSSGAANVFLKPASGGTGVIA 163
>UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5;
Bacteria|Rep: 30S ribosomal protein S5 - Aquifex
aeolicus
Length = 208
Score = 56.8 bits (131), Expect = 4e-07
Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 2/107 (1%)
Frame = +3
Query: 321 LNDEVLKIMPVQKQTRAGQRTRFXAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 500
L + ++ + T+ G+R F V +GD GH+G G +KEV AI I AK +
Sbjct: 28 LEERLIYANRTARVTKGGRRFSFSTLVVVGDRKGHVGFGHGKAKEVTLAIAKGIEKAKKN 87
Query: 501 VL--PVRXGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 635
V+ P+ G TVP V G G+ + ++PA RGTG+V+
Sbjct: 88 VIRVPIVDG----------TVPHDVIGTFGATKIIVLPARRGTGVVA 124
>UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 88
Score = 56.4 bits (130), Expect = 6e-07
Identities = 22/38 (57%), Positives = 30/38 (78%)
Frame = +3
Query: 195 WVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFF 308
W PVTKLGRLV++GK+ ++ I+ F + IKEFEI+D F
Sbjct: 35 WTPVTKLGRLVKDGKVKSIDQIFEFGIKIKEFEIVDHF 72
>UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6;
Bacteria|Rep: 30S ribosomal protein S5 - Thermotoga
maritima
Length = 178
Score = 56.0 bits (129), Expect = 7e-07
Identities = 35/105 (33%), Positives = 57/105 (54%), Gaps = 2/105 (1%)
Frame = +3
Query: 327 DEVLKIMPVQKQTRAGQRTRFXAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV- 503
+++++I K T+ G+ F +G+ NG +GLG+ ++EV AIR AI AK ++
Sbjct: 17 EKIIEIRRTSKVTKGGKNLSFRVVAIVGNKNGKVGLGIGKAREVPEAIRKAISAAKRNIV 76
Query: 504 -LPVRXGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 635
+PV G T+P +V G+ + V L PA GTGI++
Sbjct: 77 EVPVING----------TIPHEVIGRQDASKVLLKPAAPGTGIIA 111
>UniRef50_Q50301 Cluster: 30S ribosomal protein S5; n=2;
Mycoplasma|Rep: 30S ribosomal protein S5 - Mycoplasma
pneumoniae
Length = 219
Score = 56.0 bits (129), Expect = 7e-07
Identities = 34/103 (33%), Positives = 57/103 (55%)
Frame = +3
Query: 327 DEVLKIMPVQKQTRAGQRTRFXAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 506
+ ++K+ + K T+ G+ RF V +G+ G IG G+ + EV AI+ AI A S+
Sbjct: 68 ERIVKLKRISKTTKGGRNMRFSVLVVVGNRKGKIGYGIAKALEVPNAIKKAIKAAHNSLH 127
Query: 507 PVRXGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 635
+ +I K ++ +V G+ G+ V L PAP+GTGI++
Sbjct: 128 TI-------EIHKG-SIYHEVIGRSGASRVLLKPAPQGTGIIA 162
>UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_138, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 340
Score = 55.6 bits (128), Expect = 1e-06
Identities = 31/103 (30%), Positives = 55/103 (53%)
Frame = +3
Query: 327 DEVLKIMPVQKQTRAGQRTRFXAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 506
+ V+++ V K + G++ F A V +GD G +G+GV +KEV A++ + A+ +++
Sbjct: 186 ERVVQVRRVTKVVKGGKQLHFRAVVVVGDKQGQVGVGVGKAKEVIAAVQKSATNARRNII 245
Query: 507 PVRXGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 635
V + K T P + G G+ V L PA GTG+++
Sbjct: 246 TV-------PMTKYLTFPHRADGDYGAAKVMLRPASPGTGVIA 281
>UniRef50_UPI000056598D Cluster: UPI000056598D related cluster; n=1;
Mus musculus|Rep: UPI000056598D UniRef100 entry - Mus
musculus
Length = 239
Score = 54.8 bits (126), Expect = 2e-06
Identities = 50/153 (32%), Positives = 67/153 (43%), Gaps = 2/153 (1%)
Frame = +3
Query: 195 WVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAG 374
W+ +T L L + KI E + LF P K I F G SL D+++ + + +
Sbjct: 34 WLQITTLYGLFKNMKIKSQEEVCLFCCPSKSLFTITDFPGESLKDDLMMASGLGSRLLSS 93
Query: 375 QRTRFXAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRXGYWGNKIGK--P 548
QRT+ GH GL CS EVATAI+ I + L P GN GK P
Sbjct: 94 QRTK-----------GHSGLSSMCSGEVATAIQVLGITSYLG-SPWPLCREGNMTGKSLP 141
Query: 549 HTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPXP 647
P ++ S+ LI AP T I+S P
Sbjct: 142 SVCPMQIRDYHSSMLACLITAP-STCIISGLVP 173
>UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n=3;
cellular organisms|Rep: Chloroplast 30S ribosomal
protein S5 - Thalassiosira pseudonana (Marine diatom)
Length = 179
Score = 53.2 bits (122), Expect = 5e-06
Identities = 30/103 (29%), Positives = 56/103 (54%)
Frame = +3
Query: 327 DEVLKIMPVQKQTRAGQRTRFXAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 506
+ ++KI V K T+ G++ F A V IGD NG +G+GV +++V A + A + +++
Sbjct: 28 ERLIKISRVTKVTKGGKKLSFRAVVVIGDENGKVGVGVGKAEDVVNAFKKAKTDGRKNLI 87
Query: 507 PVRXGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 635
V I K ++P V G G+ + + P+ G+G+++
Sbjct: 88 DV-------PITKSLSIPHAVIGDLGACKIIMRPSIEGSGVIA 123
>UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellular
organisms|Rep: 30S ribosomal protein S5 - Zymomonas
mobilis
Length = 233
Score = 51.6 bits (118), Expect = 2e-05
Identities = 36/110 (32%), Positives = 56/110 (50%), Gaps = 2/110 (1%)
Frame = +3
Query: 312 GPSLNDEVLKIMPVQKQTRAGQRTRFXAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 491
G L ++++ I V K + G+R F A V +GD G +G G ++EV AI A A
Sbjct: 56 GEELIEKLVHINRVSKTVKGGKRFGFAALVVVGDGKGRVGFGHGKAREVPEAISKATAAA 115
Query: 492 KLSVL--PVRXGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 635
K +++ P+R G + G+ G+ G+ V L AP GTGI++
Sbjct: 116 KKTMIRVPLREGRTLHHDGR---------GRFGAGLVYLRSAPSGTGIIA 156
>UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128;
Bacteria|Rep: 30S ribosomal protein S5 - Mycobacterium
bovis
Length = 220
Score = 50.8 bits (116), Expect = 3e-05
Identities = 36/103 (34%), Positives = 51/103 (49%)
Frame = +3
Query: 327 DEVLKIMPVQKQTRAGQRTRFXAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 506
+ V+ I V K + G+R F A V +GD NG +G+G +KEV AI + A+ S
Sbjct: 44 ERVVAINRVSKVVKGGRRFSFTALVIVGDGNGMVGVGYGKAKEVPAAIAKGVEEARKSFF 103
Query: 507 PVRXGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 635
V IG T P V G+ + V L PA GTG+++
Sbjct: 104 RVPL------IGGTITHP--VQGEAAAGVVLLRPASPGTGVIA 138
>UniRef50_Q7UN03 Cluster: 30S ribosomal protein S5; n=3;
Bacteria|Rep: 30S ribosomal protein S5 - Rhodopirellula
baltica
Length = 177
Score = 49.6 bits (113), Expect = 6e-05
Identities = 34/109 (31%), Positives = 54/109 (49%)
Frame = +3
Query: 309 LGPSLNDEVLKIMPVQKQTRAGQRTRFXAFVAIGDNNGHIGLGVKCSKEVATAIRGAIIL 488
L L D V+KI + G+R F A V +G+ +G +G G + EV +++ A
Sbjct: 17 LEAGLLDRVVKIKRCAAVVKGGRRFSFAAMVVVGNGSGQVGWGYGKANEVPPSVQKAQKQ 76
Query: 489 AKLSVLPVRXGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 635
A S++ V ++P +V G+ G+ V LIPA GTGI++
Sbjct: 77 ASRSMIHVPL--------VEGSIPHQVWGRYGAARVVLIPAGAGTGIIA 117
>UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellular
organisms|Rep: 30S ribosomal protein S5 - Rhizobium
meliloti (Sinorhizobium meliloti)
Length = 189
Score = 49.6 bits (113), Expect = 6e-05
Identities = 37/105 (35%), Positives = 53/105 (50%), Gaps = 2/105 (1%)
Frame = +3
Query: 327 DEVLKIMPVQKQTRAGQRTRFXAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK--LS 500
D+++ I V K + G+R F A V +GD G +G G ++EV AIR A AK L
Sbjct: 24 DKLVAINRVAKVVKGGRRFGFAALVVVGDQKGRVGFGHGKAREVPEAIRKATEAAKRDLI 83
Query: 501 VLPVRXGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 635
+P+R G T+ V G+ G+ V L A GTGI++
Sbjct: 84 FVPLRGG---------RTLHHDVHGRHGAGKVLLRSAKPGTGIIA 119
>UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8;
Bacteria|Rep: 30S ribosomal protein S5 - Desulfotalea
psychrophila
Length = 171
Score = 49.6 bits (113), Expect = 6e-05
Identities = 33/105 (31%), Positives = 53/105 (50%)
Frame = +3
Query: 321 LNDEVLKIMPVQKQTRAGQRTRFXAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 500
L ++++ I V K + G+R F A V +GD NG +G G+ + +V AIR + A+
Sbjct: 16 LIEKIVFINRVAKVVKGGRRFSFSAIVVVGDGNGKVGYGLGKANQVPEAIRKGVERARKD 75
Query: 501 VLPVRXGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 635
+ V + PH +V G G+ V L PA GTG+++
Sbjct: 76 MALVSL----TDVSIPH----QVIGHYGAGRVFLRPASAGTGLIA 112
>UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40;
Bacteria|Rep: 30S ribosomal protein S5 - Bifidobacterium
longum
Length = 233
Score = 49.6 bits (113), Expect = 6e-05
Identities = 37/108 (34%), Positives = 52/108 (48%)
Frame = +3
Query: 312 GPSLNDEVLKIMPVQKQTRAGQRTRFXAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 491
G L D V+ I V K + G+ F A V +GD NG +G+G S+EV AI + A
Sbjct: 42 GDELLDRVVTINRVSKTHKGGRTFSFAALVVVGDGNGTVGVGYGKSREVPAAIAKGQLDA 101
Query: 492 KLSVLPVRXGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 635
K + V ++ T P V G + TV L PA GTG+++
Sbjct: 102 KKHMFSV------PRVRGTITHP--VQGHDAAGTVLLRPAAPGTGVIA 141
>UniRef50_Q7MTN0 Cluster: 30S ribosomal protein S5; n=32;
Bacteria|Rep: 30S ribosomal protein S5 - Porphyromonas
gingivalis (Bacteroides gingivalis)
Length = 172
Score = 47.6 bits (108), Expect = 3e-04
Identities = 34/105 (32%), Positives = 51/105 (48%), Gaps = 2/105 (1%)
Frame = +3
Query: 321 LNDEVLKIMPVQKQTRAGQRTRFXAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 500
L D ++ I V K T+ G+ F A V +G+ +G IG G+ + EV AI + AK +
Sbjct: 16 LKDRLVAINRVTKVTKGGRTFTFAAIVVVGNEDGVIGWGLGKAGEVPAAIAKGVEAAKKN 75
Query: 501 VL--PVRXGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGI 629
++ PV G T+P + G +V L PA GTG+
Sbjct: 76 LIRVPVHNG----------TIPHEQAASYGGASVFLKPATTGTGV 110
>UniRef50_Q6KI38 Cluster: 30S ribosomal protein S5; n=9;
Firmicutes|Rep: 30S ribosomal protein S5 - Mycoplasma
mobile
Length = 243
Score = 47.2 bits (107), Expect = 3e-04
Identities = 32/104 (30%), Positives = 53/104 (50%)
Frame = +3
Query: 327 DEVLKIMPVQKQTRAGQRTRFXAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 506
++++ I V + G+R F A V +GD G +G G + EV AI+ A+ A+ +++
Sbjct: 91 EKIVNIARVTNVVKGGRRFSFAAVVVVGDKKGRVGYGHGKALEVPDAIKKAVKDAQNNLI 150
Query: 507 PVRXGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSA 638
V I TVP + K + V L PAP+G GI+++
Sbjct: 151 RV-------PIINKSTVPHEQWAKFLASKVMLKPAPKGKGIIAS 187
>UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellular
organisms|Rep: 30S ribosomal protein S5 - Synechocystis
sp. (strain PCC 6803)
Length = 173
Score = 46.8 bits (106), Expect = 5e-04
Identities = 27/103 (26%), Positives = 51/103 (49%)
Frame = +3
Query: 327 DEVLKIMPVQKQTRAGQRTRFXAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 506
+ V++I V K + G++ F A V +G+ G +G+GV + +V A+R + K ++
Sbjct: 19 ERVIQIRRVSKVVKGGKKLSFRAIVVVGNETGQVGVGVGKAGDVIGAVRKGVADGKKQLI 78
Query: 507 PVRXGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 635
V + K +++ G G V + PA GTG+++
Sbjct: 79 EV-------PLTKSNSITHITNGVSGGAKVVVRPAAPGTGVIA 114
>UniRef50_Q82X75 Cluster: 30S ribosomal protein S5; n=11;
Bacteria|Rep: 30S ribosomal protein S5 - Nitrosomonas
europaea
Length = 177
Score = 46.4 bits (105), Expect = 6e-04
Identities = 31/105 (29%), Positives = 54/105 (51%)
Frame = +3
Query: 321 LNDEVLKIMPVQKQTRAGQRTRFXAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 500
L ++++ + V K + G+ F A +GD G +G+G S+EV A++ A+ A+
Sbjct: 21 LKEKMVSVNRVTKVVKGGRILGFAALTVVGDGKGSVGMGKGKSREVPLAVQKAMDEARQR 80
Query: 501 VLPVRXGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 635
++ V N I T+ V G+ G+ V + PA GTGI++
Sbjct: 81 MVRV------NLIN--GTLHHSVIGRHGAARVYMQPASEGTGIIA 117
>UniRef50_Q8TGP1 Cluster: Uncharacterized protein YGL123C-A; n=1;
Saccharomyces cerevisiae|Rep: Uncharacterized protein
YGL123C-A - Saccharomyces cerevisiae (Baker's yeast)
Length = 76
Score = 46.0 bits (104), Expect = 8e-04
Identities = 27/47 (57%), Positives = 31/47 (65%)
Frame = -1
Query: 334 TSSFRDGPRKKSMISNSLIGKENK*MLSSLSIFPSRTRRPSLVTGTH 194
TSS + G K SMI NSL GKE K + S + I P+ T PSLVTGTH
Sbjct: 4 TSSCKPG-NKVSMIWNSLTGKECKKISSMVVILPALTNLPSLVTGTH 49
>UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae
bacterium TAV2|Rep: Ribosomal protein S5 - Opitutaceae
bacterium TAV2
Length = 231
Score = 45.6 bits (103), Expect = 0.001
Identities = 32/105 (30%), Positives = 50/105 (47%)
Frame = +3
Query: 321 LNDEVLKIMPVQKQTRAGQRTRFXAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 500
L ++V+ I K + G+R F A +GD NG +G+G + EV AI+ A+
Sbjct: 71 LVEKVVFINRCAKVVKGGRRFSFSALAVVGDKNGKVGIGYGKANEVPDAIKKGTENARKR 130
Query: 501 VLPVRXGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 635
++ V K T+P +V G V L PA GTG+++
Sbjct: 131 MVSVTL--------KGDTIPHEVFGTHDGGKVLLRPAVTGTGLIA 167
>UniRef50_A6PPX8 Cluster: Ribosomal protein S5; n=4; Bacteria|Rep:
Ribosomal protein S5 - Victivallis vadensis ATCC BAA-548
Length = 181
Score = 45.6 bits (103), Expect = 0.001
Identities = 31/104 (29%), Positives = 49/104 (47%)
Frame = +3
Query: 324 NDEVLKIMPVQKQTRAGQRTRFXAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV 503
++ V+ I K + G+ F A V +GD G +G G + EV+ AIR A+ ++
Sbjct: 16 DESVISINRSAKVVKGGKNFSFGALVVVGDRKGRVGYGYGKANEVSDAIRKGGEAARRNL 75
Query: 504 LPVRXGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 635
+ V T+P +V K G V L PA GTG+++
Sbjct: 76 VTVPM--------HGQTLPHEVEVKFGGARVLLRPASAGTGLIA 111
>UniRef50_Q4FLN5 Cluster: 30S ribosomal protein S5; n=4;
Rickettsiales|Rep: 30S ribosomal protein S5 -
Pelagibacter ubique
Length = 170
Score = 45.2 bits (102), Expect = 0.001
Identities = 33/105 (31%), Positives = 55/105 (52%), Gaps = 2/105 (1%)
Frame = +3
Query: 327 DEVLKIMPVQKQTRAGQRTRFXAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK--LS 500
++++ I + K + G+R F A V +G+ G IG+ +K+V AI+ A A+ L
Sbjct: 13 EKLVHINRITKVVKGGRRFGFSALVVVGNQAGKIGVAHAKAKQVPDAIKKANETARRVLI 72
Query: 501 VLPVRXGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 635
+P+R G T+ V GK G+ + L AP+GTGI++
Sbjct: 73 HVPLREG---------RTIHHDVYGKDGAGKIILRSAPKGTGIIA 108
>UniRef50_UPI0001553406 Cluster: PREDICTED: hypothetical protein;
n=2; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 208
Score = 44.8 bits (101), Expect = 0.002
Identities = 22/41 (53%), Positives = 27/41 (65%)
Frame = -1
Query: 649 LGXGADTIPVPRGAGISRTVTEPHLPVTLQGTVCGFPILLP 527
LG A+ +PVP GAG+ T TEP P+TL G +CG LLP
Sbjct: 37 LGTEAEVMPVPMGAGMKSTRTEPQWPITLCG-LCGACCLLP 76
>UniRef50_A0CLK5 Cluster: Chromosome undetermined scaffold_20, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_20,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 337
Score = 44.4 bits (100), Expect = 0.002
Identities = 25/85 (29%), Positives = 39/85 (45%)
Frame = +3
Query: 387 FXAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRXGYWGNKIGKPHTVPCK 566
F + IG+ NG IG G K+ TA+R A + A+ +++P+ W HT P
Sbjct: 187 FRQLIFIGNGNGVIGYGKGKGKDFETALRRAKVDAQRNLVPISLDLW-------HTCPIP 239
Query: 567 VTGKCGSVTVRLIPAPRGTGIVSAP 641
+TG+ + + P P G P
Sbjct: 240 LTGRFNDAEIEINPRPLGFNAYGNP 264
>UniRef50_A4S3U8 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 148
Score = 44.0 bits (99), Expect = 0.003
Identities = 33/102 (32%), Positives = 50/102 (49%), Gaps = 1/102 (0%)
Frame = +3
Query: 333 VLKIMPVQKQTRAGQRTRFXAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPV 512
V+ + K T+ G T F A V +G+ +G IG +V AI A A S+ V
Sbjct: 4 VIDVNRTTKVTKGGDLTNFTAMVVVGNGDGVIGFATGKGADVGMAIDKAYRKAARSLTYV 63
Query: 513 RXGYWGNKIGKPHTVPCKVTGK-CGSVTVRLIPAPRGTGIVS 635
+ + HT+ +V GK C ++ V ++PAP G GIV+
Sbjct: 64 QRF-------EDHTIYHEVRGKYCKTICV-MLPAPSGDGIVA 97
>UniRef50_Q5L704 Cluster: 30S ribosomal protein S5; n=7;
Chlamydiaceae|Rep: 30S ribosomal protein S5 -
Chlamydophila abortus
Length = 165
Score = 43.2 bits (97), Expect = 0.006
Identities = 31/105 (29%), Positives = 50/105 (47%)
Frame = +3
Query: 321 LNDEVLKIMPVQKQTRAGQRTRFXAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 500
L ++VL + K + G++ F A + +GD G +G G + E+ AIR A+ +
Sbjct: 13 LEEKVLVVNRCSKVVKGGRKFSFSALILVGDGKGRLGYGFAKANELTDAIRKGGEAARKN 72
Query: 501 VLPVRXGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 635
++ + G+ I PH V G + L PA GTGIV+
Sbjct: 73 LITIE-SLEGDSI--PHEVLVDQDG----AQLLLKPAKPGTGIVA 110
>UniRef50_UPI000023F324 Cluster: hypothetical protein FG00649.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG00649.1 - Gibberella zeae PH-1
Length = 504
Score = 41.5 bits (93), Expect = 0.017
Identities = 34/94 (36%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Frame = +3
Query: 351 VQKQTRAGQRTRFXAFVAI-GDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRXGYW 527
V QTR G + R + VAI G+ NG +GLG+ S E A A +LA ++ PVR +
Sbjct: 350 VSNQTRLG-KVRSTSVVAIAGNGNGRLGLGMAKSTEPGVAEETAQMLAIRNMKPVRR--Y 406
Query: 528 GNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGI 629
N+ T+ VT K V L+ P G G+
Sbjct: 407 ENR-----TIYGNVTSKISGTVVELMARPPGFGL 435
>UniRef50_Q2GEC2 Cluster: 30S ribosomal protein S5; n=1;
Neorickettsia sennetsu str. Miyayama|Rep: 30S ribosomal
protein S5 - Neorickettsia sennetsu (strain Miyayama)
Length = 172
Score = 40.7 bits (91), Expect = 0.030
Identities = 32/107 (29%), Positives = 49/107 (45%), Gaps = 2/107 (1%)
Frame = +3
Query: 321 LNDEVLKIMPVQKQTRAGQRTRFXAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 500
L + V+ I V K T+ G++ F +GD G +G EV A A+ AK +
Sbjct: 11 LFESVVDIARVSKVTKGGRQFSFRVAALVGDKKGCVGYATAKHDEVLDARSKAVRKAKGA 70
Query: 501 VL--PVRXGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 635
++ P+R G T+ K G+ + + PAP GTGIV+
Sbjct: 71 MIRFPLREG---------RTIHHDCFSKLGASKLFIKPAPEGTGIVA 108
>UniRef50_Q7R438 Cluster: GLP_254_52826_53383; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_254_52826_53383 - Giardia lamblia
ATCC 50803
Length = 185
Score = 40.3 bits (90), Expect = 0.039
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Frame = -3
Query: 422 TVVVANGNKCXETCALSGTCLFLYRHDLKNLIIQ-GRAEEEINDLEFFDW*RKQVNALEF 246
+V V + + E L G L L RHD+ +L+ + +E +NDL D R N ++
Sbjct: 44 SVTVPDYHMSTEPRTLPGCGLLLDRHDIAHLLRKLALRKEVVNDLCLLDGERILENVIKG 103
Query: 245 VDFSFANKAAEFGDRNPLFXVFL 177
+ S ++AAEF R PLF + L
Sbjct: 104 LYLSCLHQAAEFRGRMPLFLLHL 126
>UniRef50_A2RAI1 Cluster: Remark: literature about the mitochondrial
ribosome structure: Pubmed 11279123. precursor; n=9;
Eurotiomycetidae|Rep: Remark: literature about the
mitochondrial ribosome structure: Pubmed 11279123.
precursor - Aspergillus niger
Length = 444
Score = 39.9 bits (89), Expect = 0.052
Identities = 32/104 (30%), Positives = 49/104 (47%)
Frame = +3
Query: 318 SLNDEVLKIMPVQKQTRAGQRTRFXAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 497
SL + L I V QTR G+ G+ NG +G+G+ S E+ A + A A
Sbjct: 254 SLYIKDLVIRRVSNQTRLGKVPSMSVVTVAGNQNGLMGIGIAKSDEIIDACQQARARAVK 313
Query: 498 SVLPVRXGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGI 629
++ PV Y + T+ V GK G+V ++L+ P G G+
Sbjct: 314 NMQPVPR-Y------EKRTIFGDVEGKVGAVQLKLMHRPPGFGL 350
>UniRef50_Q5FFR5 Cluster: 30S ribosomal protein S5; n=5; canis
group|Rep: 30S ribosomal protein S5 - Ehrlichia
ruminantium (strain Gardel)
Length = 174
Score = 39.1 bits (87), Expect = 0.091
Identities = 28/101 (27%), Positives = 47/101 (46%)
Frame = +3
Query: 333 VLKIMPVQKQTRAGQRTRFXAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPV 512
++ + V K + G+R F V IGD G +G G+ EV+ A A+ A+ +++ V
Sbjct: 20 IVSVRRVAKVVKGGRRFSFSVLVVIGDEKGKVGCGIGKHLEVSEAKVKAVNAARKNMIRV 79
Query: 513 RXGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 635
+ + T+ + K S V L A GTGI++
Sbjct: 80 H-------LRESRTLHHDIQAKFCSSKVMLRSAKVGTGIIA 113
>UniRef50_Q8X048 Cluster: Related to ribosomal protein S5; n=1;
Neurospora crassa|Rep: Related to ribosomal protein S5 -
Neurospora crassa
Length = 477
Score = 38.7 bits (86), Expect = 0.12
Identities = 29/93 (31%), Positives = 45/93 (48%)
Frame = +3
Query: 351 VQKQTRAGQRTRFXAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRXGYWG 530
V QTR G+ V G+ +G +GLG+ S E + A+ A +LA ++ P+ +
Sbjct: 323 VVNQTRLGKIASDSVMVIAGNGDGWLGLGMAKSVEASIAVEKATLLAIQNMQPIPR--YE 380
Query: 531 NKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGI 629
N+ T+ +VT K VRL P G G+
Sbjct: 381 NR-----TIYGEVTTKVSGTIVRLNSRPPGFGL 408
>UniRef50_A4R1A2 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 414
Score = 37.5 bits (83), Expect = 0.28
Identities = 29/103 (28%), Positives = 47/103 (45%)
Frame = +3
Query: 321 LNDEVLKIMPVQKQTRAGQRTRFXAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 500
L ++L V QTR G+ + +G+ NG IGLG S + A+ A ++A +
Sbjct: 250 LRHKILVQRFVTNQTRLGKVQSWHIMTIVGNGNGRIGLGEAKSVDGQIAMHKARLMAIKN 309
Query: 501 VLPVRXGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGI 629
++P+R Y + T+ KV K V + P G G+
Sbjct: 310 MVPIRR-Y------EDRTIYGKVKVKIAGTVVEMAARPPGFGL 345
>UniRef50_Q4EF76 Cluster: Putative uncharacterized protein; n=1;
Listeria monocytogenes str. 4b H7858|Rep: Putative
uncharacterized protein - Listeria monocytogenes str. 4b
H7858
Length = 77
Score = 36.7 bits (81), Expect = 0.48
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = -3
Query: 482 NSASNGSGDFLAALHTQTNMTVVVANGNKCXET 384
NS ++ +FL T+TNMT+ V+N NKC ET
Sbjct: 25 NSFTDSIWNFLRFTSTETNMTIFVSNNNKCCET 57
>UniRef50_Q2GVX5 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 407
Score = 36.7 bits (81), Expect = 0.48
Identities = 29/104 (27%), Positives = 48/104 (46%)
Frame = +3
Query: 318 SLNDEVLKIMPVQKQTRAGQRTRFXAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 497
+L+ + L V QTR G+ + +G+ NG +G+G S E + A A +LA
Sbjct: 242 NLHSKQLVQRRVANQTRLGKVQKASIMYVVGNGNGWLGIGEAKSTEPSIAGLKARLLAIR 301
Query: 498 SVLPVRXGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGI 629
++ P+R Y + T+ VT K V++ P G G+
Sbjct: 302 NMRPIRR-Y------EDRTIYGSVTAKVSGTVVKMNARPPGFGL 338
>UniRef50_P33759 Cluster: 37S ribosomal protein S5, mitochondrial
precursor; n=6; Saccharomycetales|Rep: 37S ribosomal
protein S5, mitochondrial precursor - Saccharomyces
cerevisiae (Baker's yeast)
Length = 307
Score = 35.1 bits (77), Expect = 1.5
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +3
Query: 306 FLGPSLNDEVLKIMPVQKQTRAGQRTRFXAFVAIGDNNGHIGLGV-KCSKEVATAI 470
++ L + L + V QT G+ F A V +GD NG +GLG K +E++ AI
Sbjct: 139 YITRKLTMKPLVMKRVSNQTGKGKIASFYALVVVGDKNGMVGLGEGKSREEMSKAI 194
>UniRef50_UPI0000F2DE4B Cluster: PREDICTED: similar to thioredoxin
domain containing 3 (spermatozoa),; n=1; Monodelphis
domestica|Rep: PREDICTED: similar to thioredoxin domain
containing 3 (spermatozoa), - Monodelphis domestica
Length = 559
Score = 32.7 bits (71), Expect = 7.9
Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
Frame = +3
Query: 243 DKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQ--RTRFXAFVAIGDN 416
DK E ++LFSL K ++ P LN +VL+++ +++ AG+ R + I
Sbjct: 81 DKCEPVFLFSLNGKIVSMVKGANAPLLNSKVLQLIEDERKVLAGEIPRRSDEYNILIIKP 140
Query: 417 NGHIGLGVKCSKEVATAIRGAIILAKLSVL 506
NG V K++ T GA I+A++ +L
Sbjct: 141 NGVEEEKVDTIKQLITGF-GAEIVAEMQLL 169
>UniRef50_A2AKP6 Cluster: Novel protein; n=12; Murinae|Rep: Novel
protein - Mus musculus (Mouse)
Length = 982
Score = 32.7 bits (71), Expect = 7.9
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +2
Query: 533 QDRKATHRPLQGHRQVWFRNSPADSCPSWYWYCVCAXS 646
Q+++ HRPLQG Q D+CP W +C+ S
Sbjct: 945 QEKRLLHRPLQGSSQQGHTFHLEDACPHSPWVSLCSPS 982
>UniRef50_Q1III4 Cluster: Molybdenum cofactor synthesis-like; n=1;
Acidobacteria bacterium Ellin345|Rep: Molybdenum
cofactor synthesis-like - Acidobacteria bacterium
(strain Ellin345)
Length = 338
Score = 32.7 bits (71), Expect = 7.9
Identities = 15/26 (57%), Positives = 20/26 (76%), Gaps = 1/26 (3%)
Frame = -3
Query: 368 TCLFLYR-HDLKNLIIQGRAEEEIND 294
TCLF R HDL +LI++G ++EEI D
Sbjct: 281 TCLFSVREHDLASLILEGASDEEIAD 306
>UniRef50_A6S1U3 Cluster: Putative uncharacterized protein; n=2;
Sclerotiniaceae|Rep: Putative uncharacterized protein -
Botryotinia fuckeliana B05.10
Length = 411
Score = 32.7 bits (71), Expect = 7.9
Identities = 28/103 (27%), Positives = 44/103 (42%)
Frame = +3
Query: 321 LNDEVLKIMPVQKQTRAGQRTRFXAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 500
L+ ++L V QTR G+ G+ G +G+G +E A I A +
Sbjct: 248 LDTKILVSHRVVNQTRLGKIDSMYVLAIAGNGRGRLGIGEAKGQEPEDTNNNAKIAAIKN 307
Query: 501 VLPVRXGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGI 629
+ PV Y + T+ V GK +V V+L+ P G G+
Sbjct: 308 MQPVPR-Y------EERTIYGDVEGKVSAVEVKLMARPPGFGL 343
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 608,701,796
Number of Sequences: 1657284
Number of extensions: 11978592
Number of successful extensions: 33081
Number of sequences better than 10.0: 89
Number of HSP's better than 10.0 without gapping: 31938
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33016
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48955894634
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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