Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_E21
         (501 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4P246 Cluster: Putative uncharacterized protein; n=1; ...    33   2.7  
UniRef50_A6RTS6 Cluster: Putative uncharacterized protein; n=2; ...    33   2.7  
UniRef50_Q2SXY1 Cluster: RE17165p; n=32; Burkholderia|Rep: RE171...    32   8.3  

>UniRef50_Q4P246 Cluster: Putative uncharacterized protein; n=1;
           Ustilago maydis|Rep: Putative uncharacterized protein -
           Ustilago maydis (Smut fungus)
          Length = 439

 Score = 33.5 bits (73), Expect = 2.7
 Identities = 16/36 (44%), Positives = 21/36 (58%)
 Frame = +1

Query: 277 SRVDVVQPNVPGNGDDQYPVREVHAPNPPREKNAQD 384
           SRVD  +PN   N DD+ P   V AP P  ++ A+D
Sbjct: 279 SRVDSQRPNDEANDDDE-PASNVQAPPPEEDEEAED 313


>UniRef50_A6RTS6 Cluster: Putative uncharacterized protein; n=2;
           Sclerotiniaceae|Rep: Putative uncharacterized protein -
           Botryotinia fuckeliana B05.10
          Length = 572

 Score = 33.5 bits (73), Expect = 2.7
 Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
 Frame = +1

Query: 226 RAPDGGGERPHLAANEMSRV--DVVQPNVPGNGDDQYPVREVHAPNPPR 366
           R P+ G  R   AA   +R   D+VQPN P N  + +P R ++ PN P+
Sbjct: 332 RTPNAGLARSISAAGPNARAPQDLVQPNRPANLVNAFPGRVLNQPNRPQ 380


>UniRef50_Q2SXY1 Cluster: RE17165p; n=32; Burkholderia|Rep: RE17165p
           - Burkholderia thailandensis (strain E264 / ATCC 700388
           / DSM 13276 /CIP 106301)
          Length = 915

 Score = 31.9 bits (69), Expect = 8.3
 Identities = 17/46 (36%), Positives = 22/46 (47%)
 Frame = +1

Query: 226 RAPDGGGERPHLAANEMSRVDVVQPNVPGNGDDQYPVREVHAPNPP 363
           R P GG   P   A E  + +  QPNV   G  Q  V + +AP+ P
Sbjct: 624 RGPQGGVGNPAARAGERPQPNAAQPNVARPGLPQPGVAQPNAPHAP 669


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.310    0.127    0.362 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 340,800,438
Number of Sequences: 1657284
Number of extensions: 5184450
Number of successful extensions: 11862
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 11594
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11857
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 29691847201
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)