Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_E21
         (501 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    23   1.4  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    23   1.8  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   4.1  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    21   9.5  
AY739659-1|AAU85298.1|  288|Apis mellifera hyperpolarization-act...    21   9.5  
AY739658-1|AAU85297.1|  664|Apis mellifera hyperpolarization-act...    21   9.5  
AY280848-1|AAQ16312.1|  632|Apis mellifera hyperpolarization-act...    21   9.5  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   9.5  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   9.5  

>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 18/44 (40%), Positives = 21/44 (47%)
 Frame = +1

Query: 1   SXSPPHSLTGASVAAAKAHVSLSRRPPQEVKLETASIAYSENST 132
           S +P  S  G   AAA A +S  RR   E  L TAS   S  S+
Sbjct: 148 SSAPTGSSCGPGAAAAAALLS-KRRSVSECSLGTASSTSSTASS 190


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = -1

Query: 63  RDVSLRGGYARPGEGVRRR 7
           RDV L G  AR  +G+RRR
Sbjct: 420 RDVILVGEQARAQDGLRRR 438


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +3

Query: 69   PSAAARGQTRDGVDRL 116
            PS + RG+  DG DRL
Sbjct: 1379 PSPSDRGRNDDGSDRL 1394


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +1

Query: 334 VREVHAPNPPR 366
           VR+VHA  PP+
Sbjct: 242 VRKVHATKPPK 252


>AY739659-1|AAU85298.1|  288|Apis mellifera
           hyperpolarization-activated ion channelvariant T
           protein.
          Length = 288

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = +1

Query: 301 NVPGNGDDQYPVREVHAPNPPREKNAQDLKGQ 396
           N  G+G   + V +V     P+E+    L GQ
Sbjct: 2   NYKGSGKVHFGVDDVSLYGTPKEEPGPGLPGQ 33


>AY739658-1|AAU85297.1|  664|Apis mellifera
           hyperpolarization-activated ion channelvariant L
           protein.
          Length = 664

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = +1

Query: 301 NVPGNGDDQYPVREVHAPNPPREKNAQDLKGQ 396
           N  G+G   + V +V     P+E+    L GQ
Sbjct: 2   NYKGSGKVHFGVDDVSLYGTPKEEPGPGLPGQ 33


>AY280848-1|AAQ16312.1|  632|Apis mellifera
           hyperpolarization-activated ion channel protein.
          Length = 632

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = +1

Query: 301 NVPGNGDDQYPVREVHAPNPPREKNAQDLKGQ 396
           N  G+G   + V +V     P+E+    L GQ
Sbjct: 2   NYKGSGKVHFGVDDVSLYGTPKEEPGPGLPGQ 33


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 10/38 (26%), Positives = 17/38 (44%)
 Frame = +1

Query: 10   PPHSLTGASVAAAKAHVSLSRRPPQEVKLETASIAYSE 123
            PP+SL  A VA+   +V    +     ++    + Y E
Sbjct: 910  PPNSLETAMVASRSINVKWQHKSQDTTEVTKYILQYKE 947


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 10/38 (26%), Positives = 17/38 (44%)
 Frame = +1

Query: 10   PPHSLTGASVAAAKAHVSLSRRPPQEVKLETASIAYSE 123
            PP+SL  A VA+   +V    +     ++    + Y E
Sbjct: 906  PPNSLETAMVASRSINVKWQHKSQDTTEVTKYILQYKE 943


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.310    0.127    0.362 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,356
Number of Sequences: 438
Number of extensions: 1292
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13741392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.3 bits)