Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_E12
(507 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P41094 Cluster: 40S ribosomal protein S18; n=137; Eukar... 259 3e-68
UniRef50_P62269 Cluster: 40S ribosomal protein S18; n=58; Eukary... 243 2e-63
UniRef50_UPI00001C91B1 Cluster: PREDICTED: similar to ribosomal ... 164 9e-40
UniRef50_UPI00006CC3CE Cluster: ribosomal protein S13p/S18e cont... 157 2e-37
UniRef50_Q7QRY7 Cluster: GLP_549_8004_7540; n=1; Giardia lamblia... 134 8e-31
UniRef50_A2E0E1 Cluster: Ribosomal protein S13p/S18e, putative; ... 124 2e-27
UniRef50_Q8SRP2 Cluster: 40S ribosomal protein S18; n=1; Encepha... 119 4e-26
UniRef50_P54019 Cluster: 30S ribosomal protein S13P; n=9; Euryar... 112 4e-24
UniRef50_Q8TRR2 Cluster: 30S ribosomal protein S13P; n=4; Euryar... 112 4e-24
UniRef50_Q9HJD6 Cluster: 30S ribosomal protein S13P; n=4; Thermo... 108 8e-23
UniRef50_Q0W1V6 Cluster: 30S ribosomal protein S13P; n=11; Archa... 107 1e-22
UniRef50_A0EBZ1 Cluster: Chromosome undetermined scaffold_89, wh... 105 8e-22
UniRef50_Q96YV7 Cluster: 30S ribosomal protein S13P; n=10; Archa... 104 1e-21
UniRef50_Q6LXN1 Cluster: 30S ribosomal protein S13P; n=4; Methan... 100 4e-20
UniRef50_Q00861 Cluster: 30S ribosomal protein S13P; n=5; Haloba... 93 4e-18
UniRef50_A0RY01 Cluster: 30S ribosomal protein S13P; n=2; Thermo... 93 4e-18
UniRef50_Q3LW54 Cluster: Ribosomal protein S18; n=1; Bigelowiell... 92 6e-18
UniRef50_Q4V607 Cluster: IP07925p; n=3; Sophophora|Rep: IP07925p... 90 2e-17
UniRef50_Q8H583 Cluster: Ribosomal protein S18-like; n=1; Oryza ... 86 4e-16
UniRef50_A0SNY5 Cluster: SSU ribosomal protein S13AB; n=1; uncul... 85 1e-15
UniRef50_A4WM28 Cluster: 30S ribosomal protein S13P; n=2; Thermo... 78 1e-13
UniRef50_Q74M95 Cluster: 30S ribosomal protein S13P; n=1; Nanoar... 77 3e-13
UniRef50_Q00VP7 Cluster: Chromosome 14 contig 1, DNA sequence; n... 75 9e-13
UniRef50_UPI0001555DA0 Cluster: PREDICTED: similar to olfactory ... 58 1e-07
UniRef50_Q9X1I5 Cluster: 30S ribosomal protein S13; n=14; Bacter... 58 2e-07
UniRef50_A7PUB9 Cluster: Chromosome chr7 scaffold_31, whole geno... 49 7e-05
UniRef50_Q601J1 Cluster: 30S ribosomal protein S13; n=3; Mycopla... 46 4e-04
UniRef50_A6PT06 Cluster: Ribosomal protein S13; n=1; Victivallis... 46 5e-04
UniRef50_Q2JL76 Cluster: 30S ribosomal protein S13; n=212; cellu... 45 9e-04
UniRef50_Q7QRY8 Cluster: GLP_549_7513_8304; n=1; Giardia lamblia... 45 0.001
UniRef50_O66486 Cluster: 30S ribosomal protein S13; n=28; cellul... 43 0.005
UniRef50_Q5NQ42 Cluster: 30S ribosomal protein S13; n=107; cellu... 41 0.019
UniRef50_A6RYD3 Cluster: Putative uncharacterized protein; n=1; ... 39 0.057
UniRef50_Q0QIP8 Cluster: Ribosomal protein S13; n=1; Oltmannsiel... 38 0.17
UniRef50_O21258 Cluster: Ribosomal protein S13; n=1; Reclinomona... 36 0.40
UniRef50_P42732 Cluster: 30S ribosomal protein S13, chloroplast ... 36 0.40
UniRef50_A0CSW0 Cluster: Chromosome undetermined scaffold_26, wh... 35 0.92
UniRef50_P46747 Cluster: Mitochondrial ribosomal protein S13; n=... 35 0.92
UniRef50_Q8W9S0 Cluster: Ribosomal protein S13; n=1; Mesostigma ... 35 1.2
UniRef50_Q4WP11 Cluster: 40S ribosomal protein S13; n=5; Eurotio... 35 1.2
UniRef50_A1CXK9 Cluster: 40S ribosomal protein S13; n=7; Pezizom... 35 1.2
UniRef50_Q5B4R2 Cluster: Putative uncharacterized protein; n=1; ... 34 1.6
UniRef50_O59772 Cluster: Mitochondrial ribosomal protein subunit... 34 1.6
UniRef50_Q5CLQ5 Cluster: COG1752: esterase of the alpha-beta hyd... 34 2.1
UniRef50_Q24CF1 Cluster: Putative uncharacterized protein; n=1; ... 34 2.1
UniRef50_Q8FS35 Cluster: 30S ribosomal protein S13; n=42; Bacter... 34 2.1
UniRef50_Q98JF7 Cluster: Mll1963 protein; n=1; Mesorhizobium lot... 33 2.8
UniRef50_A5FGA8 Cluster: DNA-(Apurinic or apyrimidinic site) lya... 33 2.8
UniRef50_Q9TCB7 Cluster: Ribosomal protein S13; n=1; Nephroselmi... 33 2.8
UniRef50_Q7PY55 Cluster: ENSANGP00000013280; n=4; Endopterygota|... 33 3.7
UniRef50_Q22HC8 Cluster: Kinesin motor domain containing protein... 33 3.7
UniRef50_Q4FQV4 Cluster: Putative uncharacterized protein; n=2; ... 33 4.9
UniRef50_Q7PZ56 Cluster: ENSANGP00000008877; n=2; Culicidae|Rep:... 33 4.9
UniRef50_A7S3C9 Cluster: Predicted protein; n=1; Nematostella ve... 33 4.9
UniRef50_Q6CFI9 Cluster: Yarrowia lipolytica chromosome B of str... 33 4.9
UniRef50_A6LXE0 Cluster: Putative uncharacterized protein precur... 32 8.6
UniRef50_Q6UVP6 Cluster: Ribosomal protein S13; n=1; Pseudendocl... 32 8.6
UniRef50_Q7RQE1 Cluster: Protein factor associated with neutral-... 32 8.6
UniRef50_Q290U4 Cluster: GA15861-PA; n=1; Drosophila pseudoobscu... 32 8.6
UniRef50_A0DZU7 Cluster: Chromosome undetermined scaffold_70, wh... 32 8.6
>UniRef50_P41094 Cluster: 40S ribosomal protein S18; n=137;
Eukaryota|Rep: 40S ribosomal protein S18 - Drosophila
melanogaster (Fruit fly)
Length = 152
Score = 259 bits (634), Expect = 3e-68
Identities = 118/137 (86%), Positives = 130/137 (94%)
Frame = +2
Query: 59 MSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECT 238
MSLVIP+KFQHILRIMNTNIDGKRKV AMTAIKGVGRRYSNIVLKKAD+DL KRAGECT
Sbjct: 1 MSLVIPEKFQHILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECT 60
Query: 239 EXEVEKIITIMSNPXQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREXLERLKKIRAH 418
E EV+K++TI+SNP QYK+P+WFLNRQKDI+DGKY QLTSSNLDSKLR+ LERLKKIR+H
Sbjct: 61 EEEVDKVVTIISNPLQYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSH 120
Query: 419 RGMRHYWGLRVRGQHTK 469
RG+RHYWGLRVRGQHTK
Sbjct: 121 RGLRHYWGLRVRGQHTK 137
>UniRef50_P62269 Cluster: 40S ribosomal protein S18; n=58;
Eukaryota|Rep: 40S ribosomal protein S18 - Homo sapiens
(Human)
Length = 152
Score = 243 bits (595), Expect = 2e-63
Identities = 108/137 (78%), Positives = 127/137 (92%)
Frame = +2
Query: 59 MSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECT 238
MSLVIP+KFQHILR++NTNIDG+RK+ FA+TAIKGVGRRY+++VL+KADIDL KRAGE T
Sbjct: 1 MSLVIPEKFQHILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELT 60
Query: 239 EXEVEKIITIMSNPXQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREXLERLKKIRAH 418
E EVE++ITIM NP QYKIPDWFLNRQKD+ DGKYSQ+ ++ LD+KLRE LERLKKIRAH
Sbjct: 61 EDEVERVITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAH 120
Query: 419 RGMRHYWGLRVRGQHTK 469
RG+RH+WGLRVRGQHTK
Sbjct: 121 RGLRHFWGLRVRGQHTK 137
>UniRef50_UPI00001C91B1 Cluster: PREDICTED: similar to ribosomal
protein S18; n=2; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein S18 - Rattus norvegicus
Length = 170
Score = 164 bits (399), Expect = 9e-40
Identities = 80/136 (58%), Positives = 105/136 (77%)
Frame = +2
Query: 59 MSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECT 238
MSLVI +K QHIL+++NTNID +++ FA+TA KG +RY+++VL+KA IDL K AGE T
Sbjct: 1 MSLVISEKSQHILQVLNTNIDEQQETAFAITATKGAEQRYAHVVLRKAGIDLTKMAGELT 60
Query: 239 EXEVEKIITIMSNPXQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREXLERLKKIRAH 418
E +VE++ITIM NP QY+IP QK + DG+ SQ+ ++ LD+KLRE LERLKKIRAH
Sbjct: 61 EDKVERVITIMQNPRQYEIP------QKGVRDGRCSQVPANGLDNKLREELERLKKIRAH 114
Query: 419 RGMRHYWGLRVRGQHT 466
RG+RH+WGL V Q T
Sbjct: 115 RGLRHFWGLHVHCQLT 130
>UniRef50_UPI00006CC3CE Cluster: ribosomal protein S13p/S18e
containing protein; n=1; Tetrahymena thermophila
SB210|Rep: ribosomal protein S13p/S18e containing
protein - Tetrahymena thermophila SB210
Length = 155
Score = 157 bits (380), Expect = 2e-37
Identities = 74/139 (53%), Positives = 100/139 (71%), Gaps = 2/139 (1%)
Frame = +2
Query: 59 MSLVIPDK--FQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGE 232
MS VI + F++I RI+NTNIDGKR A+T I+G+GRR++ I+ K ID + RAG
Sbjct: 1 MSFVIEKESDFKYIHRILNTNIDGKRITPIALTGIRGIGRRFAYIICKVLKIDPNARAGL 60
Query: 233 CTEXEVEKIITIMSNPXQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREXLERLKKIR 412
TE + KI ++++P + IP W LNR D DGK Q+ S+ LD+K+RE LERLKKI+
Sbjct: 61 LTEDQCNKITDLIADPEAHGIPTWLLNRINDFKDGKNYQMASNTLDTKMREDLERLKKIK 120
Query: 413 AHRGMRHYWGLRVRGQHTK 469
+HRG+RH+WGL+VRGQHTK
Sbjct: 121 SHRGLRHFWGLKVRGQHTK 139
>UniRef50_Q7QRY7 Cluster: GLP_549_8004_7540; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_549_8004_7540 - Giardia lamblia ATCC
50803
Length = 154
Score = 134 bits (325), Expect = 8e-31
Identities = 61/136 (44%), Positives = 90/136 (66%)
Frame = +2
Query: 62 SLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTE 241
++V P+ ++ +LR+ NTNI GK + A+ IKG+GRR++N+ LKKA+ID+ KRAGE T
Sbjct: 3 TIVQPNDYRDLLRMFNTNIQGKVVLECALVGIKGIGRRFANVALKKANIDVHKRAGELTA 62
Query: 242 XEVEKIITIMSNPXQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREXLERLKKIRAHR 421
E + ++ ++ +P + IP W LNR D GK + + + S R LERL+K R R
Sbjct: 63 AEEDALMKVLEDPLSHGIPAWMLNRNNDFESGKDMHILVNTIASTHRADLERLRKTRCER 122
Query: 422 GMRHYWGLRVRGQHTK 469
G+RH+ L+VRGQHTK
Sbjct: 123 GVRHHHNLKVRGQHTK 138
>UniRef50_A2E0E1 Cluster: Ribosomal protein S13p/S18e, putative;
n=3; Trichomonas vaginalis G3|Rep: Ribosomal protein
S13p/S18e, putative - Trichomonas vaginalis G3
Length = 155
Score = 124 bits (298), Expect = 2e-27
Identities = 55/132 (41%), Positives = 92/132 (69%)
Frame = +2
Query: 74 PDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEXEVE 253
P F+ ++R+++TN+DG+R + A+T I G+GRR++ V+++A +D +RAG T E E
Sbjct: 8 PAAFRDMVRMLSTNVDGRRPLYLALTNISGIGRRFAYAVVRRAGLDPLRRAGTLTPKEEE 67
Query: 254 KIITIMSNPXQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREXLERLKKIRAHRGMRH 433
I++I+ NP +++IP W LNR+ D G+ + +++L + +R +ER+KK+R RG+RH
Sbjct: 68 LIVSIIQNPTEHQIPVWMLNRRFDRATGQNTHWVATDLSANIRAEIERMKKMRMKRGIRH 127
Query: 434 YWGLRVRGQHTK 469
GL+VRGQ TK
Sbjct: 128 GLGLKVRGQCTK 139
>UniRef50_Q8SRP2 Cluster: 40S ribosomal protein S18; n=1;
Encephalitozoon cuniculi|Rep: 40S ribosomal protein S18
- Encephalitozoon cuniculi
Length = 153
Score = 119 bits (286), Expect = 4e-26
Identities = 59/132 (44%), Positives = 86/132 (65%)
Frame = +2
Query: 74 PDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEXEVE 253
P + Q+I+RI NTNIDG +++ FA+T I+G+G R + + K+ IDL KRAGE E E++
Sbjct: 7 PAEVQYIVRIHNTNIDGTKRIPFALTKIRGIGIRIATAICKRLGIDLRKRAGEMGEDEMK 66
Query: 254 KIITIMSNPXQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREXLERLKKIRAHRGMRH 433
+I + +P IP+ ++N Q+DI+DG S L + LD+ LR +ER KK + R R
Sbjct: 67 RISDAILDPASVGIPESYMNHQRDIIDGTTSHLIGTRLDADLRMMIERGKKNKRIRAYRL 126
Query: 434 YWGLRVRGQHTK 469
GL+VRGQ TK
Sbjct: 127 DVGLKVRGQRTK 138
>UniRef50_P54019 Cluster: 30S ribosomal protein S13P; n=9;
Euryarchaeota|Rep: 30S ribosomal protein S13P -
Methanococcus jannaschii
Length = 150
Score = 112 bits (270), Expect = 4e-24
Identities = 51/130 (39%), Positives = 85/130 (65%)
Frame = +2
Query: 80 KFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEXEVEKI 259
+F++++R+ T++DG +K++ A+ I GVG + +++ A +D +K AG TE EV+KI
Sbjct: 5 EFKYLIRVSRTDLDGNKKLIMALQDIYGVGEAMARAIVRVAKLDPNKLAGYLTEEEVKKI 64
Query: 260 ITIMSNPXQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREXLERLKKIRAHRGMRHYW 439
++++P ++ IP W NR+KD V G+ + S+L +E + RLK+IR +RG+RH
Sbjct: 65 EEVLADPAKFGIPSWMFNRRKDYVTGEDKHVIESDLMIIKQEDINRLKRIRCYRGIRHEL 124
Query: 440 GLRVRGQHTK 469
GL RGQ TK
Sbjct: 125 GLPCRGQRTK 134
>UniRef50_Q8TRR2 Cluster: 30S ribosomal protein S13P; n=4;
Euryarchaeota|Rep: 30S ribosomal protein S13P -
Methanosarcina acetivorans
Length = 162
Score = 112 bits (270), Expect = 4e-24
Identities = 53/131 (40%), Positives = 82/131 (62%)
Frame = +2
Query: 77 DKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEXEVEK 256
++ +H++RIMNT++ G + V +A+T + GVGRR + ++ K A +D G E EV K
Sbjct: 18 EELRHLVRIMNTDLQGAKPVQYALTGLPGVGRRTAKLIAKGAGVDPSAILGYLPEEEVAK 77
Query: 257 IITIMSNPXQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREXLERLKKIRAHRGMRHY 436
+ T + + +P W LNRQKD+ G+ L +++ RE + LKK+RA+RG+RH
Sbjct: 78 LDTAIGK-FEDIVPSWMLNRQKDLATGQDKHLLGTDILLTFREDINNLKKVRAYRGLRHE 136
Query: 437 WGLRVRGQHTK 469
GL+VRGQ TK
Sbjct: 137 RGLKVRGQRTK 147
>UniRef50_Q9HJD6 Cluster: 30S ribosomal protein S13P; n=4;
Thermoplasmatales|Rep: 30S ribosomal protein S13P -
Thermoplasma acidophilum
Length = 171
Score = 108 bits (259), Expect = 8e-23
Identities = 46/129 (35%), Positives = 88/129 (68%)
Frame = +2
Query: 83 FQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEXEVEKII 262
FQ+I+RI N +++G+R + A++ +KG+G R ++ ++ D+ +DK+ GE E ++EK+
Sbjct: 28 FQYIVRIANKDLNGERLLPLALSDLKGIGERLGYVIAERLDLPIDKKIGELKEEQLEKLR 87
Query: 263 TIMSNPXQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREXLERLKKIRAHRGMRHYWG 442
+ +Y +P+W LN +++ V GK L S++L+ +++E + +KKIR+++G+RH G
Sbjct: 88 EYVE-AKEYDLPEWLLNHRREPVTGKNLNLVSTDLEIQVQEDINLMKKIRSYKGIRHEKG 146
Query: 443 LRVRGQHTK 469
+VRGQ T+
Sbjct: 147 KKVRGQRTR 155
>UniRef50_Q0W1V6 Cluster: 30S ribosomal protein S13P; n=11;
Archaea|Rep: 30S ribosomal protein S13P - Uncultured
methanogenic archaeon RC-I
Length = 224
Score = 107 bits (257), Expect = 1e-22
Identities = 50/131 (38%), Positives = 83/131 (63%)
Frame = +2
Query: 77 DKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEXEVEK 256
D+ ++I+RI NT++DG + V FA+T IKG+G R S I+ ++A +D G +V+K
Sbjct: 67 DEIKYIVRIANTDLDGTQTVEFALTGIKGIGNRISKIIARQAQVDPHATMGYLPPEQVDK 126
Query: 257 IITIMSNPXQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREXLERLKKIRAHRGMRHY 436
+ ++ N + +P W LNR++DI G+ L +L ++E + +KKIR+++G+RH
Sbjct: 127 LRAVIDN-LEANVPVWMLNRRRDIYTGEDKHLYGVDLTMAVKEDINIMKKIRSYKGIRHE 185
Query: 437 WGLRVRGQHTK 469
G +VRGQ TK
Sbjct: 186 RGQKVRGQRTK 196
>UniRef50_A0EBZ1 Cluster: Chromosome undetermined scaffold_89, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_89,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 193
Score = 105 bits (251), Expect = 8e-22
Identities = 56/141 (39%), Positives = 91/141 (64%), Gaps = 4/141 (2%)
Frame = +2
Query: 59 MSLVIP--DKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGE 232
MSLV+ D+F+ I+RI+NTN+DGK+++ + + +IKG+GRR++ + K ++L KRAGE
Sbjct: 1 MSLVLEKADQFRQIIRILNTNVDGKQQMAYEIRSIKGIGRRFAIQICKVLRLNLTKRAGE 60
Query: 233 CTEXEVEKIITIMSNPXQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREXLERLKKIR 412
T+ E KI ++ QY +D+ +GK ++T++ L++KLRE LER+KKI+
Sbjct: 61 LTDEEAHKITEVIKMVPQY---------IRDLKNGKNYEVTTNELETKLREDLERIKKIK 111
Query: 413 AHRG--MRHYWGLRVRGQHTK 469
+ +RH+WGLR K
Sbjct: 112 YSQWLCLRHHWGLRAEDNKQK 132
>UniRef50_Q96YV7 Cluster: 30S ribosomal protein S13P; n=10;
Archaea|Rep: 30S ribosomal protein S13P - Sulfolobus
tokodaii
Length = 172
Score = 104 bits (249), Expect = 1e-21
Identities = 46/130 (35%), Positives = 83/130 (63%)
Frame = +2
Query: 80 KFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEXEVEKI 259
+F++I+R+ ++DG KV +A+ +KG+G + ++ K +D D+R GE ++ +++KI
Sbjct: 6 QFKYIVRLFGQDVDGTMKVPYALAMVKGIGYNTARAIVFKLGLDKDRRLGELSDEDIKKI 65
Query: 260 ITIMSNPXQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREXLERLKKIRAHRGMRHYW 439
+++ ++P+W NR+KD G L +S+L +R +ER KKI++ RG+RH
Sbjct: 66 ENYLTDKKILEVPNWMYNRRKDYESGIDMHLVTSDLIFYVRNDIEREKKIKSWRGVRHSL 125
Query: 440 GLRVRGQHTK 469
GL+VRGQ T+
Sbjct: 126 GLKVRGQRTR 135
>UniRef50_Q6LXN1 Cluster: 30S ribosomal protein S13P; n=4;
Methanococcus|Rep: 30S ribosomal protein S13P -
Methanococcus maripaludis
Length = 149
Score = 99.5 bits (237), Expect = 4e-20
Identities = 43/130 (33%), Positives = 80/130 (61%)
Frame = +2
Query: 80 KFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEXEVEKI 259
+F+H +RI T+++GK + +A+ +KG+GR + V++ ++D ++AG + +V KI
Sbjct: 5 EFKHRIRISKTDLEGKNPLEYALQDMKGIGRAMARAVIRVTELDPKQQAGYLADEDVLKI 64
Query: 260 ITIMSNPXQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREXLERLKKIRAHRGMRHYW 439
+++ +P + IP W NR+KD+ G L ++L ++E + +KKIR ++G+RH
Sbjct: 65 ESVLEDPATHGIPSWMFNRKKDVYSGLDKHLIETDLVLTVQEDITNMKKIRCYKGIRHEL 124
Query: 440 GLRVRGQHTK 469
L RGQ T+
Sbjct: 125 RLPCRGQRTR 134
>UniRef50_Q00861 Cluster: 30S ribosomal protein S13P; n=5;
Halobacteriaceae|Rep: 30S ribosomal protein S13P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 177
Score = 92.7 bits (220), Expect = 4e-18
Identities = 43/131 (32%), Positives = 77/131 (58%)
Frame = +2
Query: 77 DKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEXEVEK 256
+ ++ +RI T++DG + V A+T + G+G R + I+ +KAD+D G+ + +E+
Sbjct: 18 EDIRYFVRIGQTDLDGTKSVERALTELNGIGHRAARIIAQKADVDRRAVFGKLDDDVIER 77
Query: 257 IITIMSNPXQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREXLERLKKIRAHRGMRHY 436
++ + N +P+W N QKD G+ + T ++L R+ + R+K I ++RG+RH
Sbjct: 78 VVERVENFAD-DVPEWMTNHQKDYFTGETTHETGNDLQLTRRQDINRMKMIDSYRGVRHK 136
Query: 437 WGLRVRGQHTK 469
G +VRGQ TK
Sbjct: 137 RGQKVRGQRTK 147
>UniRef50_A0RY01 Cluster: 30S ribosomal protein S13P; n=2;
Thermoprotei|Rep: 30S ribosomal protein S13P -
Cenarchaeum symbiosum
Length = 227
Score = 92.7 bits (220), Expect = 4e-18
Identities = 40/130 (30%), Positives = 78/130 (60%)
Frame = +2
Query: 80 KFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEXEVEKI 259
+++HI+RI+ ++ G++K + + I+G+G ++ +L ID + G T+ +V I
Sbjct: 50 EYKHIVRILGNDLPGEKKAVVGLRQIRGIGYGFATAILDVLKIDNNSNIGYLTDEQVASI 109
Query: 260 ITIMSNPXQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREXLERLKKIRAHRGMRHYW 439
++ +P P WFLNR+KD+ G+ + +S+++ +R +ER + + +G RH +
Sbjct: 110 EKLLQDPAGAGFPTWFLNRRKDLETGEDRHIFTSDIEFTVRNDVERERVSGSWKGYRHMF 169
Query: 440 GLRVRGQHTK 469
GL+VRGQ T+
Sbjct: 170 GLKVRGQRTR 179
>UniRef50_Q3LW54 Cluster: Ribosomal protein S18; n=1; Bigelowiella
natans|Rep: Ribosomal protein S18 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 159
Score = 92.3 bits (219), Expect = 6e-18
Identities = 44/131 (33%), Positives = 74/131 (56%)
Frame = +2
Query: 77 DKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEXEVEK 256
+K +RI + NI+G F + IKGVG R SN++ K D++ + + ++E+
Sbjct: 13 EKSMTFIRIFDCNINGSLSCNFGLRNIKGVGIRMSNVLRKILKKDINYKLYNIEKADLEE 72
Query: 257 IITIMSNPXQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREXLERLKKIRAHRGMRHY 436
++ I + P W +NR+ D + G + S+ LDS L+E ++RL I+ ++G+RH
Sbjct: 73 VVNIFGKSSRKAFPSWLMNRRADFLTGDNLHVLSTVLDSALQEDIKRLVTIKNNKGLRHL 132
Query: 437 WGLRVRGQHTK 469
L+ RGQHTK
Sbjct: 133 SRLKTRGQHTK 143
>UniRef50_Q4V607 Cluster: IP07925p; n=3; Sophophora|Rep: IP07925p -
Drosophila melanogaster (Fruit fly)
Length = 246
Score = 90.2 bits (214), Expect = 2e-17
Identities = 39/48 (81%), Positives = 45/48 (93%)
Frame = +2
Query: 155 IKGVGRRYSNIVLKKADIDLDKRAGECTEXEVEKIITIMSNPXQYKIP 298
IKGVGRRYSNIVLKKAD+DL KRAGECTE EV+K++TI+SNP QYK+P
Sbjct: 1 IKGVGRRYSNIVLKKADVDLTKRAGECTEEEVDKVVTIISNPLQYKVP 48
>UniRef50_Q8H583 Cluster: Ribosomal protein S18-like; n=1; Oryza
sativa (japonica cultivar-group)|Rep: Ribosomal protein
S18-like - Oryza sativa subsp. japonica (Rice)
Length = 145
Score = 86.2 bits (204), Expect = 4e-16
Identities = 37/52 (71%), Positives = 45/52 (86%)
Frame = +2
Query: 314 RQKDIVDGKYSQLTSSNLDSKLREXLERLKKIRAHRGMRHYWGLRVRGQHTK 469
++KD DG++SQ+ S+ LD KLR+ LERLKKIR HRG+RHYWGLRVRGQHTK
Sbjct: 79 QKKDYKDGRFSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHTK 130
>UniRef50_A0SNY5 Cluster: SSU ribosomal protein S13AB; n=1;
uncultured euryarchaeote ARMAN-2|Rep: SSU ribosomal
protein S13AB - uncultured euryarchaeote ARMAN-2
Length = 177
Score = 84.6 bits (200), Expect = 1e-15
Identities = 43/134 (32%), Positives = 75/134 (55%), Gaps = 4/134 (2%)
Frame = +2
Query: 80 KFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSN----IVLKKADIDLDKRAGECTEXE 247
K I+RI N +I+G + A+ +KG+G+ S+ ++ K +ID G E +
Sbjct: 15 KAMSIVRIANKDINGGLNIQRALDQVKGIGQTMSHSLSYVIEHKFNIDPSTPIGSLNESQ 74
Query: 248 VEKIITIMSNPXQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREXLERLKKIRAHRGM 427
V ++ ++ +P +Y +P + LNR+ D+ GK L ++L +R+ + R +R RG
Sbjct: 75 VTQVEELIKDPHKYGVPKYLLNRRNDMDTGKDMHLIGNDLIFAVRQSINRDVTLRVWRGY 134
Query: 428 RHYWGLRVRGQHTK 469
RH +G +VRGQHT+
Sbjct: 135 RHQYGQKVRGQHTR 148
>UniRef50_A4WM28 Cluster: 30S ribosomal protein S13P; n=2;
Thermoproteaceae|Rep: 30S ribosomal protein S13P -
Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321)
Length = 152
Score = 78.2 bits (184), Expect = 1e-13
Identities = 40/125 (32%), Positives = 71/125 (56%)
Frame = +2
Query: 92 ILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEXEVEKIITIM 271
I+R+ +T+++G ++V +A+ I+G+G + + K ID G E ++ K+ +
Sbjct: 8 IVRVGDTDLEGNKQVAYALAKIRGIGIASAYAICWKLGIDPHAVLGALPEEQINKLDWAV 67
Query: 272 SNPXQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREXLERLKKIRAHRGMRHYWGLRV 451
N + P WFLNR+KD G+ L S L + ++ +KK+++ +G+RH GL+V
Sbjct: 68 RNLHEVA-PAWFLNRRKDPETGRDMHLIGSELVLAAKRDVDLMKKLKSWKGIRHSLGLKV 126
Query: 452 RGQHT 466
RGQ T
Sbjct: 127 RGQRT 131
>UniRef50_Q74M95 Cluster: 30S ribosomal protein S13P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S13P -
Nanoarchaeum equitans
Length = 153
Score = 76.6 bits (180), Expect = 3e-13
Identities = 38/126 (30%), Positives = 67/126 (53%)
Frame = +2
Query: 92 ILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEXEVEKIITIM 271
I+ I + ++DG + + + + GV +++ V ID ++ G ++ E+EK+ +
Sbjct: 13 IVHIADVDLDGHKPIYVELRKVVGVNWMFAHAVCAALGIDKWRKIGSLSDEELEKLEDAL 72
Query: 272 SNPXQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREXLERLKKIRAHRGMRHYWGLRV 451
NP +Y IP W NR++D GK L ++ + ++R +I + RG RH GL V
Sbjct: 73 RNPWKYGIPSWLYNRRRDPETGKDLHLVGNDYKITMEFDIKREMQINSWRGYRHREGLPV 132
Query: 452 RGQHTK 469
RGQ T+
Sbjct: 133 RGQRTR 138
>UniRef50_Q00VP7 Cluster: Chromosome 14 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 14 contig 1, DNA
sequence - Ostreococcus tauri
Length = 272
Score = 74.9 bits (176), Expect = 9e-13
Identities = 42/135 (31%), Positives = 69/135 (51%)
Frame = -3
Query: 463 VLTTHTKAPVMSHPSVSANLLEPLQXFTEF*IQVGGGQLAVFTINNILLPI*EPVWYLIL 284
VLTT T APV+S SV +NLL+ L+ + +++ G L I I+L + EP+ L
Sbjct: 44 VLTTDTDAPVVSQTSVVSNLLQTLEVVAQLRVELVGHHLRELAILEIVLAVQEPIRNSEL 103
Query: 283 XRIRHDSDNFFNLXFCAFASTLVKINVGFFENNVGVPPANTFDSRHRKHNLAFAIDVRIH 104
R+ HD F L L +I++ F + VG A+ D H+L ++V +
Sbjct: 104 SRVGHDHHQRFQLRGGELPGALPEIDLSLFAHQVGEAAADPLDLGQGVHHLLTTVNVGVE 163
Query: 103 DTKNMLKFVWNDQRH 59
D ++L+ + +D+ H
Sbjct: 164 DADDVLEIITDDEAH 178
>UniRef50_UPI0001555DA0 Cluster: PREDICTED: similar to olfactory
specific medium-chain acyl CoA synthetase; n=1;
Ornithorhynchus anatinus|Rep: PREDICTED: similar to
olfactory specific medium-chain acyl CoA synthetase -
Ornithorhynchus anatinus
Length = 176
Score = 58.0 bits (134), Expect = 1e-07
Identities = 23/28 (82%), Positives = 25/28 (89%)
Frame = +2
Query: 269 MSNPXQYKIPDWFLNRQKDIVDGKYSQL 352
M NP QYKIPDWFLNRQKD+ DGKYSQ+
Sbjct: 1 MQNPRQYKIPDWFLNRQKDVKDGKYSQV 28
>UniRef50_Q9X1I5 Cluster: 30S ribosomal protein S13; n=14;
Bacteria|Rep: 30S ribosomal protein S13 - Thermotoga
maritima
Length = 125
Score = 57.6 bits (133), Expect = 2e-07
Identities = 44/124 (35%), Positives = 64/124 (51%)
Frame = +2
Query: 98 RIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEXEVEKIITIMSN 277
RI+ + +KV A+T I G+GR S +LK ID +KR G+ T+ E+ KI
Sbjct: 3 RIVGVELPNNKKVWVALTYIYGIGRSRSFEILKNTGIDPEKRVGDLTDEEISKI------ 56
Query: 278 PXQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREXLERLKKIRAHRGMRHYWGLRVRG 457
+Y I D F V+G+ L S++ + RL +I +RG+RH GL VRG
Sbjct: 57 -TKY-IQDHFK------VEGE--------LRSEVERNIRRLIEIGCYRGIRHKLGLPVRG 100
Query: 458 QHTK 469
Q T+
Sbjct: 101 QKTR 104
>UniRef50_A7PUB9 Cluster: Chromosome chr7 scaffold_31, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr7 scaffold_31, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 48
Score = 48.8 bits (111), Expect = 7e-05
Identities = 19/41 (46%), Positives = 29/41 (70%)
Frame = +1
Query: 49 LNQNVAGHSRQISTYSSYHEYEHRWQTQGYVCDDGYQRCWP 171
L+ +V G R IST++S ++E RW+T+ +VC D +QR WP
Sbjct: 5 LSMSVLGSERGISTHTSCAQHERRWETEDHVCSDLHQRYWP 45
>UniRef50_Q601J1 Cluster: 30S ribosomal protein S13; n=3; Mycoplasma
hyopneumoniae|Rep: 30S ribosomal protein S13 -
Mycoplasma hyopneumoniae (strain 232)
Length = 137
Score = 46.4 bits (105), Expect = 4e-04
Identities = 30/124 (24%), Positives = 65/124 (52%)
Frame = +2
Query: 98 RIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEXEVEKIITIMSN 277
R++N I ++++ A+ +I G+G+ + +++K +++ G+ K + N
Sbjct: 3 RVLNVEIPNHKRIVIALCSIFGIGKSLATEIVEKTAKLQEEKFGK-------KFPILTEN 55
Query: 278 PXQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREXLERLKKIRAHRGMRHYWGLRVRG 457
+I + L +D+ + T +L +++ ++RL +I+ +RG+RH GL VRG
Sbjct: 56 TKVKEINEEVLQVIRDVAK---TYKTEGDLHREVQSNIKRLIEIKCYRGIRHRKGLPVRG 112
Query: 458 QHTK 469
Q T+
Sbjct: 113 QVTQ 116
>UniRef50_A6PT06 Cluster: Ribosomal protein S13; n=1; Victivallis
vadensis ATCC BAA-548|Rep: Ribosomal protein S13 -
Victivallis vadensis ATCC BAA-548
Length = 131
Score = 46.0 bits (104), Expect = 5e-04
Identities = 36/124 (29%), Positives = 59/124 (47%)
Frame = +2
Query: 98 RIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEXEVEKIITIMSN 277
RI+ +I G ++V F++ + GVG + +++K ID D +A + T ++ I I+
Sbjct: 3 RIIGVDIPGNKRVEFSLRYLYGVGPAKALEIIQKVGIDPDLKAKDLTPDQIGAITKIL-- 60
Query: 278 PXQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREXLERLKKIRAHRGMRHYWGLRVRG 457
Q D+ L +L L + RL++I +RG+RH L VRG
Sbjct: 61 -------------QDDL-------LVEGDLRRTLAADIRRLQQINCYRGIRHRRSLPVRG 100
Query: 458 QHTK 469
Q TK
Sbjct: 101 QRTK 104
>UniRef50_Q2JL76 Cluster: 30S ribosomal protein S13; n=212; cellular
organisms|Rep: 30S ribosomal protein S13 - Synechococcus
sp. (strain JA-2-3B'a(2-13)) (Cyanobacteria
bacteriumYellowstone B-Prime)
Length = 127
Score = 45.2 bits (102), Expect = 9e-04
Identities = 37/124 (29%), Positives = 57/124 (45%)
Frame = +2
Query: 98 RIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEXEVEKIITIMSN 277
RI +I +++V A+T I G+G S +L K I+ D R + T+ EV + T++
Sbjct: 3 RIAGVDIPREKRVEIALTYIYGIGLTRSRQILAKTGINPDTRTRDLTDAEVAALRTVVEG 62
Query: 278 PXQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREXLERLKKIRAHRGMRHYWGLRVRG 457
Q V+G + + N+ +RL I +RG RH GL VRG
Sbjct: 63 EYQ--------------VEGDLRRQEAMNI--------KRLIDIGTYRGRRHRLGLPVRG 100
Query: 458 QHTK 469
Q T+
Sbjct: 101 QRTR 104
>UniRef50_Q7QRY8 Cluster: GLP_549_7513_8304; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_549_7513_8304 - Giardia lamblia ATCC
50803
Length = 263
Score = 44.8 bits (101), Expect = 0.001
Identities = 38/139 (27%), Positives = 60/139 (43%), Gaps = 4/139 (2%)
Frame = -3
Query: 463 VLTTHTKAPVMSHPSVSANLLEPLQXFTEF*IQVGGG---QLAVFTINNILLPI*EPVWY 293
VL + + V++ +++A+ E LQ T + G G + VF I++ I P W
Sbjct: 29 VLPANLQVVVVADTALAASFTETLQVRT---VGRGYGIDQNVHVFARFKIIVTIKHPGWN 85
Query: 292 LILXRIRHDSDNFFNLXFCAFASTLVKINVGFFENNVGVPPANTFDSRHRKHNLAFAIDV 113
+ + D L C S V +NVGF E N+G N +S A+DV
Sbjct: 86 AVGEGVLKDLHESILLGRCELTSAFVNVNVGFLEGNIGKAAPNPLNSDKGTLKYDLALDV 145
Query: 112 RIHDTKNMLKFV-WNDQRH 59
+ T+ + V ND+ H
Sbjct: 146 CVKHTQEVPVVVGLNDRCH 164
>UniRef50_O66486 Cluster: 30S ribosomal protein S13; n=28; cellular
organisms|Rep: 30S ribosomal protein S13 - Aquifex
aeolicus
Length = 126
Score = 42.7 bits (96), Expect = 0.005
Identities = 33/124 (26%), Positives = 56/124 (45%)
Frame = +2
Query: 98 RIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEXEVEKIITIMSN 277
RI ++ +++ A+T I G+G + + +K I KR GE T E
Sbjct: 3 RIAGVDLPNNKRLEVALTYIYGIGWSRAREICEKTGIPCTKRVGELTPDE---------- 52
Query: 278 PXQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREXLERLKKIRAHRGMRHYWGLRVRG 457
LN + +D Y +L +++ +++LK + +RG+RH GL VRG
Sbjct: 53 ----------LNTLRKFIDENYK--VEGDLRREVQLNIKKLKDMGCYRGIRHARGLPVRG 100
Query: 458 QHTK 469
Q T+
Sbjct: 101 QQTR 104
>UniRef50_Q5NQ42 Cluster: 30S ribosomal protein S13; n=107; cellular
organisms|Rep: 30S ribosomal protein S13 - Zymomonas
mobilis
Length = 122
Score = 40.7 bits (91), Expect = 0.019
Identities = 32/123 (26%), Positives = 57/123 (46%)
Frame = +2
Query: 98 RIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEXEVEKIITIMSN 277
RI NI ++V A+T I G+G + ++ K I ++R + ++ EV +I
Sbjct: 3 RIAGVNIPTNKRVEIALTYIHGIGPTTAKKIVTKLGIAPERRVQDLSDNEVLQI------ 56
Query: 278 PXQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREXLERLKKIRAHRGMRHYWGLRVRG 457
++ +D Y+ +L ++ ++RL + +RG+RH GL VRG
Sbjct: 57 --------------REAIDADYT--VEGDLRRQVAMNIKRLMDLACYRGLRHRKGLPVRG 100
Query: 458 QHT 466
Q T
Sbjct: 101 QRT 103
>UniRef50_A6RYD3 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 82
Score = 39.1 bits (87), Expect = 0.057
Identities = 16/37 (43%), Positives = 27/37 (72%)
Frame = +2
Query: 359 SNLDSKLREXLERLKKIRAHRGMRHYWGLRVRGQHTK 469
+ L +L++ +ER++ + ++RG RH GL VRGQ+TK
Sbjct: 5 TELKRRLQDNIERMRTMGSYRGRRHAMGLPVRGQNTK 41
>UniRef50_Q0QIP8 Cluster: Ribosomal protein S13; n=1;
Oltmannsiellopsis viridis|Rep: Ribosomal protein S13 -
Oltmannsiellopsis viridis (Marine flagellate)
Length = 117
Score = 37.5 bits (83), Expect = 0.17
Identities = 17/32 (53%), Positives = 22/32 (68%)
Frame = +2
Query: 374 KLREXLERLKKIRAHRGMRHYWGLRVRGQHTK 469
K RE ++RL +I ++RG RH GL RGQ TK
Sbjct: 72 KKRENIQRLVRISSYRGFRHTAGLPCRGQRTK 103
>UniRef50_O21258 Cluster: Ribosomal protein S13; n=1; Reclinomonas
americana|Rep: Ribosomal protein S13 - Reclinomonas
americana
Length = 122
Score = 36.3 bits (80), Expect = 0.40
Identities = 29/125 (23%), Positives = 56/125 (44%)
Frame = +2
Query: 92 ILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEXEVEKIITIM 271
++ + NI+ +K+ FA+ AI G+G + + + ++ + + E ++ K+
Sbjct: 1 MIHLFGININSNKKIPFALKAIYGLGNKKVDELCSYMGLNPKLKMSDLNESQISKLC--- 57
Query: 272 SNPXQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREXLERLKKIRAHRGMRHYWGLRV 451
+ I + FL S L ++RL I+++RG+RH +GL V
Sbjct: 58 -----HYIEENFL--------------IESELRKNQTYNIKRLLDIKSYRGLRHAYGLPV 98
Query: 452 RGQHT 466
GQ T
Sbjct: 99 HGQRT 103
>UniRef50_P42732 Cluster: 30S ribosomal protein S13, chloroplast
precursor; n=6; cellular organisms|Rep: 30S ribosomal
protein S13, chloroplast precursor - Arabidopsis
thaliana (Mouse-ear cress)
Length = 169
Score = 36.3 bits (80), Expect = 0.40
Identities = 15/27 (55%), Positives = 21/27 (77%)
Frame = +2
Query: 389 LERLKKIRAHRGMRHYWGLRVRGQHTK 469
++RLK+I+ +RG+RH GL RGQ TK
Sbjct: 122 IKRLKEIQCYRGVRHIQGLPCRGQRTK 148
>UniRef50_A0CSW0 Cluster: Chromosome undetermined scaffold_26, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_26,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 367
Score = 35.1 bits (77), Expect = 0.92
Identities = 18/54 (33%), Positives = 28/54 (51%)
Frame = +2
Query: 176 YSNIVLKKADIDLDKRAGECTEXEVEKIITIMSNPXQYKIPDWFLNRQKDIVDG 337
Y N + D + DK + E + E E++IT++ KI DW +KD+ DG
Sbjct: 93 YQNAIDSAQD-EKDKYSRETLQKEKEELITLICEMKHSKIEDWLKTIKKDLPDG 145
>UniRef50_P46747 Cluster: Mitochondrial ribosomal protein S13; n=1;
Prototheca wickerhamii|Rep: Mitochondrial ribosomal
protein S13 - Prototheca wickerhamii
Length = 119
Score = 35.1 bits (77), Expect = 0.92
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = +2
Query: 353 TSSNLDSKLREXLERLKKIRAHRGMRHYWGLRVRGQHT 466
T S++ R+ ++RL I ++RG RH GL VRGQ +
Sbjct: 66 TGSDVRRFTRQNIQRLVNIHSYRGYRHIQGLPVRGQRS 103
>UniRef50_Q8W9S0 Cluster: Ribosomal protein S13; n=1; Mesostigma
viride|Rep: Ribosomal protein S13 - Mesostigma viride
Length = 116
Score = 34.7 bits (76), Expect = 1.2
Identities = 15/26 (57%), Positives = 19/26 (73%)
Frame = +2
Query: 392 ERLKKIRAHRGMRHYWGLRVRGQHTK 469
ERL KI ++RG RH+ GL RGQ T+
Sbjct: 81 ERLIKISSYRGFRHHRGLPARGQRTR 106
>UniRef50_Q4WP11 Cluster: 40S ribosomal protein S13; n=5;
Eurotiomycetidae|Rep: 40S ribosomal protein S13 -
Aspergillus fumigatus (Sartorya fumigata)
Length = 169
Score = 34.7 bits (76), Expect = 1.2
Identities = 15/37 (40%), Positives = 26/37 (70%)
Frame = +2
Query: 359 SNLDSKLREXLERLKKIRAHRGMRHYWGLRVRGQHTK 469
++L ++ + ++RLK+ ++RG RH GL VRGQ T+
Sbjct: 103 NDLRRQILDDIKRLKESGSYRGRRHALGLPVRGQRTR 139
>UniRef50_A1CXK9 Cluster: 40S ribosomal protein S13; n=7;
Pezizomycotina|Rep: 40S ribosomal protein S13 -
Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL
181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
3700 / NRRL 181))
Length = 118
Score = 34.7 bits (76), Expect = 1.2
Identities = 15/37 (40%), Positives = 26/37 (70%)
Frame = +2
Query: 359 SNLDSKLREXLERLKKIRAHRGMRHYWGLRVRGQHTK 469
++L ++ + ++RLK+ ++RG RH GL VRGQ T+
Sbjct: 66 NDLRRQILDDIKRLKESGSYRGRRHALGLPVRGQRTR 102
>UniRef50_Q5B4R2 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 130
Score = 34.3 bits (75), Expect = 1.6
Identities = 15/37 (40%), Positives = 25/37 (67%)
Frame = +2
Query: 359 SNLDSKLREXLERLKKIRAHRGMRHYWGLRVRGQHTK 469
++L ++ + ++RLK+ +RG RH GL VRGQ T+
Sbjct: 65 NDLRRQVLDDIKRLKETGTYRGRRHALGLPVRGQRTR 101
>UniRef50_O59772 Cluster: Mitochondrial ribosomal protein subunit
S37; n=1; Schizosaccharomyces pombe|Rep: Mitochondrial
ribosomal protein subunit S37 - Schizosaccharomyces
pombe (Fission yeast)
Length = 151
Score = 34.3 bits (75), Expect = 1.6
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = +2
Query: 389 LERLKKIRAHRGMRHYWGLRVRGQHTK 469
+ RL IR +RGMRH GL V GQ+T+
Sbjct: 77 ISRLVNIRCYRGMRHVNGLPVNGQNTR 103
>UniRef50_Q5CLQ5 Cluster: COG1752: esterase of the alpha-beta
hydrolase superfamily; n=2; Cryptosporidium|Rep:
COG1752: esterase of the alpha-beta hydrolase
superfamily - Cryptosporidium hominis
Length = 794
Score = 33.9 bits (74), Expect = 2.1
Identities = 29/116 (25%), Positives = 49/116 (42%), Gaps = 5/116 (4%)
Frame = +2
Query: 77 DKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEXEVEK 256
+ F +L+ +N +I K + + + SN K DK+ + E
Sbjct: 645 NSFVVVLKSLNDDIQRLNKTLITIDSFLKSSNNISNKATKLLKYIEDKQKKGIFSAKFED 704
Query: 257 IITIMSNPXQYK-----IPDWFLNRQKDIVDGKYSQLTSSNLDSKLREXLERLKKI 409
+IT++S Y I +N ++ IVD K+SQL + + LRE E K+
Sbjct: 705 VITLLSLYEDYVEKLQGIRIKEINSRRIIVDSKHSQLILARIIIALREQNEHFPKL 760
>UniRef50_Q24CF1 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 432
Score = 33.9 bits (74), Expect = 2.1
Identities = 22/70 (31%), Positives = 34/70 (48%)
Frame = +2
Query: 11 FPLLLCLGTLVRNLTKMSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIV 190
+ LLL L +L L I ++ Q +I N K+KVM A+ I G + N V
Sbjct: 194 YSLLLNLNQNFSHLVLQILFILEQIQQRFKIQNRMKRNKKKVMKALVQILGFNDQIKNTV 253
Query: 191 LKKADIDLDK 220
L++ I++ K
Sbjct: 254 LEEDQINVKK 263
>UniRef50_Q8FS35 Cluster: 30S ribosomal protein S13; n=42;
Bacteria|Rep: 30S ribosomal protein S13 -
Corynebacterium efficiens
Length = 122
Score = 33.9 bits (74), Expect = 2.1
Identities = 25/124 (20%), Positives = 57/124 (45%)
Frame = +2
Query: 98 RIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEXEVEKIITIMSN 277
R+ ++ +++ A+T I G+G + +L++ + D R T+ ++ +
Sbjct: 3 RLAGVDLPRNKRMEIALTYIYGIGPARAKQLLEETGVSPDLRTDNLTDEQIASL------ 56
Query: 278 PXQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREXLERLKKIRAHRGMRHYWGLRVRG 457
+D+++ + +L +++ + R +I +++G+RH GL VRG
Sbjct: 57 --------------RDVIEATWK--VEGDLRREVQADIRRKIEIGSYQGLRHRRGLPVRG 100
Query: 458 QHTK 469
Q TK
Sbjct: 101 QRTK 104
>UniRef50_Q98JF7 Cluster: Mll1963 protein; n=1; Mesorhizobium
loti|Rep: Mll1963 protein - Rhizobium loti
(Mesorhizobium loti)
Length = 315
Score = 33.5 bits (73), Expect = 2.8
Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Frame = -3
Query: 235 AFASTLVKINVGFFENNVG-VPPANTFDSRHRK-HNLAFAIDVRIHDTKNML 86
AFA T V+ VGF++ VG + +D +K H+ AF DV + DTK L
Sbjct: 23 AFAETPVEPTVGFYKYTVGDIEVTAIYDGIWKKPHDPAFIKDVSVEDTKAAL 74
>UniRef50_A5FGA8 Cluster: DNA-(Apurinic or apyrimidinic site) lyase;
n=1; Flavobacterium johnsoniae UW101|Rep: DNA-(Apurinic
or apyrimidinic site) lyase - Flavobacterium johnsoniae
UW101
Length = 216
Score = 33.5 bits (73), Expect = 2.8
Identities = 16/46 (34%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Frame = +2
Query: 74 PDKFQHILRIMNT--NIDGKRKVMFAMTAIKGVGRRYSNIVLKKAD 205
P K Q +L I +T N + M +TA+KG+GR+ +N++L++ +
Sbjct: 87 PTKAQWLLEIAHTIQNDNDIPLTMSGLTALKGIGRKSANVILRETE 132
>UniRef50_Q9TCB7 Cluster: Ribosomal protein S13; n=1; Nephroselmis
olivacea|Rep: Ribosomal protein S13 - Nephroselmis
olivacea
Length = 125
Score = 33.5 bits (73), Expect = 2.8
Identities = 29/122 (23%), Positives = 52/122 (42%)
Frame = +2
Query: 101 IMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEXEVEKIITIMSNP 280
I NT + K+KV A+ I G+G + + + + + + + +VE++ ++S
Sbjct: 4 IANTYLSQKQKVSIALQQIYGIGSHLAYQICDQLGLSPNFKIEQLNRNQVEQLSLLVSQ- 62
Query: 281 XQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREXLERLKKIRAHRGMRHYWGLRVRGQ 460
S +T S L +++ + RL I +RG R+ L VRGQ
Sbjct: 63 ---------------------SYVTGSKLKRTIQQDMSRLISISCYRGFRYIQKLPVRGQ 101
Query: 461 HT 466
T
Sbjct: 102 RT 103
>UniRef50_Q7PY55 Cluster: ENSANGP00000013280; n=4;
Endopterygota|Rep: ENSANGP00000013280 - Anopheles
gambiae str. PEST
Length = 183
Score = 33.1 bits (72), Expect = 3.7
Identities = 23/51 (45%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Frame = +2
Query: 116 IDGKRKVMFAMTAIKGVGRRYSNIVLK---KADI-DLDKRAGECTEXEVEK 256
+D K KV A G+GR +S +LK K I DLD AGE T E+EK
Sbjct: 1 MDLKNKVALVTGAATGLGRAFSEELLKHGAKVVICDLDSDAGELTVEELEK 51
>UniRef50_Q22HC8 Cluster: Kinesin motor domain containing protein;
n=1; Tetrahymena thermophila SB210|Rep: Kinesin motor
domain containing protein - Tetrahymena thermophila
SB210
Length = 1633
Score = 33.1 bits (72), Expect = 3.7
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = +2
Query: 20 LLCLGTLVRNLTKMSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNI-VLK 196
LLCLG +R+L IP + + RI+N + V+ + G+ NI VLK
Sbjct: 414 LLCLGNCIRSLRNGDENIPYRESKLTRILNEYFVDQNNVLMIVHIHPGISYTEENINVLK 473
Query: 197 KADIDLDKR 223
A I L+ +
Sbjct: 474 YAAIGLEAK 482
>UniRef50_Q4FQV4 Cluster: Putative uncharacterized protein; n=2;
Psychrobacter|Rep: Putative uncharacterized protein -
Psychrobacter arcticum
Length = 720
Score = 32.7 bits (71), Expect = 4.9
Identities = 19/59 (32%), Positives = 30/59 (50%)
Frame = +2
Query: 14 PLLLCLGTLVRNLTKMSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIV 190
PL TL+R +K S+V P + H + N +DG + F + A K + YSN++
Sbjct: 243 PLSAFAHTLLRIDSKASVVDPSQIHHAYAL-NDTVDGDTEDNFVLYATKSMTGGYSNLI 300
>UniRef50_Q7PZ56 Cluster: ENSANGP00000008877; n=2; Culicidae|Rep:
ENSANGP00000008877 - Anopheles gambiae str. PEST
Length = 887
Score = 32.7 bits (71), Expect = 4.9
Identities = 16/57 (28%), Positives = 27/57 (47%)
Frame = +2
Query: 269 MSNPXQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREXLERLKKIRAHRGMRHYW 439
M P + + +W +K VD ++L +L E LER++ RA ++ YW
Sbjct: 214 MLYPVKRTVYNWDFRMKKKDVDDAAAELAQVEAAKRLEEALERIRLNRAAAKIQRYW 270
>UniRef50_A7S3C9 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 270
Score = 32.7 bits (71), Expect = 4.9
Identities = 25/70 (35%), Positives = 31/70 (44%), Gaps = 2/70 (2%)
Frame = +2
Query: 230 ECTEXEVEKIITIMSNPXQYKIPDWFLNRQKDIVDGKYSQLTS--SNLDSKLREXLERLK 403
E TE V K + I N Y+ DW LN V+G + D KL LER K
Sbjct: 31 ELTETPVRKAMFIQVNQT-YEETDWILNLPD--VNGTLEGIVGWVDLQDPKLESILERYK 87
Query: 404 KIRAHRGMRH 433
K RG+R+
Sbjct: 88 KFPKFRGVRN 97
>UniRef50_Q6CFI9 Cluster: Yarrowia lipolytica chromosome B of strain
CLIB122 of Yarrowia lipolytica; n=2;
Saccharomycetales|Rep: Yarrowia lipolytica chromosome B
of strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 156
Score = 32.7 bits (71), Expect = 4.9
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +2
Query: 359 SNLDSKLREXLERLKKIRAHRGMRHYWGLRVRGQHTK 469
S+L K+ +ER +K ++ G RH G+ V+GQ T+
Sbjct: 70 SDLAKKINADIERKRKTGSYVGRRHVMGMPVKGQKTR 106
>UniRef50_A6LXE0 Cluster: Putative uncharacterized protein
precursor; n=1; Clostridium beijerinckii NCIMB 8052|Rep:
Putative uncharacterized protein precursor - Clostridium
beijerinckii NCIMB 8052
Length = 445
Score = 31.9 bits (69), Expect = 8.6
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
Frame = +2
Query: 164 VGRRYSNIVLKKADIDLDKRAGECTEXEVE----KIITIMSNPXQYKIPDWFLNRQKDIV 331
V +RY+ I+LKK DID K E +++ K+ ++ P Q + LN+ +D +
Sbjct: 148 VTKRYNAIILKKIDIDKLKTGLEIKNNDLDALKIKVSVGLAIPNQLEDKQIELNKAQDEI 207
Query: 332 DGKYSQLTSSNLD 370
K + L +NLD
Sbjct: 208 KAKENSL-KNNLD 219
>UniRef50_Q6UVP6 Cluster: Ribosomal protein S13; n=1;
Pseudendoclonium akinetum|Rep: Ribosomal protein S13 -
Pseudendoclonium akinetum (Green alga)
Length = 119
Score = 31.9 bits (69), Expect = 8.6
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +2
Query: 317 QKDIVDGKYSQLTSSNLDSKLREXLERLKKIRAHRGMRHYWGLRVRGQHTK 469
Q +++ +L +SN + E ++ L KI +RG RH L RGQ T+
Sbjct: 51 QLELLTKSCRRLIASNKKREKVEAIKSLIKISCYRGTRHMNALPCRGQRTR 101
>UniRef50_Q7RQE1 Cluster: Protein factor associated with
neutral-sphingomyelinase activation; n=3; Plasmodium
(Vinckeia)|Rep: Protein factor associated with
neutral-sphingomyelinase activation - Plasmodium yoelii
yoelii
Length = 1490
Score = 31.9 bits (69), Expect = 8.6
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -3
Query: 208 NVGFFENNVGVPPANTFDSRHRKHNL 131
N+ F NN PP NTF+ ++K+N+
Sbjct: 1189 NLSQFSNNCATPPINTFEKENQKYNV 1214
>UniRef50_Q290U4 Cluster: GA15861-PA; n=1; Drosophila
pseudoobscura|Rep: GA15861-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 354
Score = 31.9 bits (69), Expect = 8.6
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +2
Query: 302 WFLNRQKDIVDGKYSQLTSSNLDSKLREXLERLKKIRAHR 421
WF+N K + + K + N SKL + E+LK + HR
Sbjct: 201 WFMNNLKHLKNLKQLTIRGKNYPSKLLDIAEKLKAVGRHR 240
>UniRef50_A0DZU7 Cluster: Chromosome undetermined scaffold_70, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_70,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 713
Score = 31.9 bits (69), Expect = 8.6
Identities = 13/49 (26%), Positives = 23/49 (46%)
Frame = +2
Query: 176 YSNIVLKKADIDLDKRAGECTEXEVEKIITIMSNPXQYKIPDWFLNRQK 322
Y + +K ++D K C + E+EK + SNP + W + +K
Sbjct: 533 YMKVQGQKNELDFHKLINSCLDKEIEKNLKNFSNPATIDLYPWMIKYRK 581
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 514,049,351
Number of Sequences: 1657284
Number of extensions: 9909236
Number of successful extensions: 27631
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 26953
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27618
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 30528237263
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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