Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_E12
(507 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0527 + 3915670-3915821,3916866-3917054,3917477-3917582 212 1e-55
07_01_0525 + 3904388-3904390,3904485-3904645,3905347-3905394,390... 201 2e-52
03_06_0283 - 32832572-32832677,32833343-32833531,32833582-328337... 200 7e-52
07_01_0531 + 3928833-3928867,3930848-3930943,3931873-3931978 89 1e-18
03_05_0839 + 28097780-28097878,28098573-28098782,28099196-28099372 42 3e-04
01_07_0179 - 41814886-41815074,41815172-41815222,41815365-418154... 30 1.2
06_03_1275 + 28903961-28904123,28904225-28904322,28904406-289045... 28 3.7
03_05_0830 + 28034179-28035492 28 3.7
03_01_0404 + 3138624-3140096 28 3.7
01_01_0605 + 4497308-4497472,4497719-4497904,4498898-4499003,449... 28 3.7
07_03_1085 - 23851852-23853165 28 5.0
03_01_0104 - 830884-831282,831511-832205,832368-833387,833570-83... 28 5.0
02_05_1211 + 34956601-34956850,34956950-34957102,34957562-349576... 28 5.0
03_01_0646 + 4742398-4742994,4743681-4744085 27 6.5
>07_01_0527 + 3915670-3915821,3916866-3917054,3917477-3917582
Length = 148
Score = 212 bits (518), Expect = 1e-55
Identities = 89/131 (67%), Positives = 117/131 (89%)
Frame = +2
Query: 77 DKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEXEVEK 256
+ FQHILR++NTN+DGK+K+MFA+T+IKG+GRR+SNI KKADID++KRAGE T E+E+
Sbjct: 3 EDFQHILRLLNTNVDGKQKIMFALTSIKGIGRRFSNIACKKADIDMNKRAGELTPEELER 62
Query: 257 IITIMSNPXQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREXLERLKKIRAHRGMRHY 436
++T+++NP Q+K+PDWFLNR+KD DG++SQ+ S+ LD KLR+ LERLKKIR HRG+RHY
Sbjct: 63 LMTVVANPRQFKVPDWFLNRKKDYKDGRFSQVVSNALDMKLRDDLERLKKIRNHRGLRHY 122
Query: 437 WGLRVRGQHTK 469
WGLRVRGQHTK
Sbjct: 123 WGLRVRGQHTK 133
>07_01_0525 +
3904388-3904390,3904485-3904645,3905347-3905394,
3905714-3905902,3906872-3906977
Length = 168
Score = 201 bits (491), Expect = 2e-52
Identities = 93/153 (60%), Positives = 121/153 (79%), Gaps = 16/153 (10%)
Frame = +2
Query: 59 MSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKR----- 223
MSL+ + FQHILR++NTN+DGK+K+MFA+T+IKGVGRR+SNI KKADID++KR
Sbjct: 1 MSLIAGEDFQHILRLLNTNVDGKQKIMFALTSIKGVGRRFSNIACKKADIDMNKRSGVVC 60
Query: 224 -----------AGECTEXEVEKIITIMSNPXQYKIPDWFLNRQKDIVDGKYSQLTSSNLD 370
AGE T E+E+++T+++NP Q+K+PDWFLNR+KD DG++SQ+ S+ LD
Sbjct: 61 YYLAVHNYVEWAGELTPEELERLMTVVANPRQFKVPDWFLNRKKDYKDGRFSQVVSNALD 120
Query: 371 SKLREXLERLKKIRAHRGMRHYWGLRVRGQHTK 469
KLR+ LERLKKIR HRG+RHYWGLRVRGQHTK
Sbjct: 121 MKLRDDLERLKKIRNHRGLRHYWGLRVRGQHTK 153
>03_06_0283 -
32832572-32832677,32833343-32833531,32833582-32833796,
32833900-32833902
Length = 170
Score = 200 bits (487), Expect = 7e-52
Identities = 93/155 (60%), Positives = 121/155 (78%), Gaps = 18/155 (11%)
Frame = +2
Query: 59 MSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKR----- 223
MSL+ + FQHILR++NTN+DGK+K+MFA+T+IKGVGRR+SNI KKADID++KR
Sbjct: 1 MSLIAGEDFQHILRLLNTNVDGKQKIMFALTSIKGVGRRFSNIACKKADIDMNKRQEPPP 60
Query: 224 -------------AGECTEXEVEKIITIMSNPXQYKIPDWFLNRQKDIVDGKYSQLTSSN 364
AGE T E+E+++T+++NP Q+K+PDWFLNR+KD DG++SQ+ S+
Sbjct: 61 PPSRRQISVMVGGAGELTPEELERLMTVVANPRQFKVPDWFLNRKKDYKDGRFSQVVSNA 120
Query: 365 LDSKLREXLERLKKIRAHRGMRHYWGLRVRGQHTK 469
LD KLR+ LERLKKIR HRG+RHYWGLRVRGQHTK
Sbjct: 121 LDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHTK 155
>07_01_0531 + 3928833-3928867,3930848-3930943,3931873-3931978
Length = 78
Score = 89.4 bits (212), Expect = 1e-18
Identities = 40/57 (70%), Positives = 47/57 (82%), Gaps = 1/57 (1%)
Frame = +2
Query: 302 WFL-NRQKDIVDGKYSQLTSSNLDSKLREXLERLKKIRAHRGMRHYWGLRVRGQHTK 469
W L R+KD DG++SQ+ S+ LD KLR+ LERLKKIR HRG+RHYWGLRVRGQHTK
Sbjct: 7 WILPERKKDYKDGRFSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHTK 63
>03_05_0839 + 28097780-28097878,28098573-28098782,28099196-28099372
Length = 161
Score = 41.9 bits (94), Expect = 3e-04
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = +2
Query: 380 REXLERLKKIRAHRGMRHYWGLRVRGQHTK 469
R +ERLK+IR +RG+RH GL VRGQ TK
Sbjct: 108 RVAIERLKEIRCYRGIRHKLGLPVRGQRTK 137
>01_07_0179 -
41814886-41815074,41815172-41815222,41815365-41815469,
41815852-41815945,41816056-41816150,41816581-41816700,
41816737-41816832,41817272-41817569,41817777-41817853,
41818932-41819447
Length = 546
Score = 29.9 bits (64), Expect = 1.2
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +3
Query: 390 WRGSRRFALTEGCDITGAFVCVVSTLRLLAGEEXLL 497
W+ FA+ G D+ F+ + T LLA EE LL
Sbjct: 212 WQEESCFAIGAGTDVANLFISIKRTQLLLATEEWLL 247
>06_03_1275 +
28903961-28904123,28904225-28904322,28904406-28904550,
28904690-28904814,28904957-28905049,28905297-28905362,
28905459-28905524,28905790-28905870,28905947-28906123,
28906212-28906287,28906394-28906521,28906639-28906950
Length = 509
Score = 28.3 bits (60), Expect = 3.7
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = -1
Query: 204 SAFLRTMLEYLRPTPLIAVIANITL 130
S+FL TM EY+R P A +AN T+
Sbjct: 255 SSFLGTMEEYIREAPRTAPVANKTV 279
>03_05_0830 + 28034179-28035492
Length = 437
Score = 28.3 bits (60), Expect = 3.7
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = -1
Query: 81 LSGMTSDILVKFLTNVPKHNSRGNGKA 1
LSG T +IL KF ++PK + RG A
Sbjct: 160 LSGNTREILHKFTVDLPKKHGRGGQSA 186
>03_01_0404 + 3138624-3140096
Length = 490
Score = 28.3 bits (60), Expect = 3.7
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +2
Query: 332 DGKYSQLTSSNLDSKLREXLERLKKIRAHRGMR 430
+G Y QL++ LDS ++ R++K+ RG+R
Sbjct: 403 EGVYVQLSNIYLDSNRKDDARRVRKLIGSRGIR 435
>01_01_0605 +
4497308-4497472,4497719-4497904,4498898-4499003,
4499062-4499216,4499341-4499424,4499498-4499589,
4499729-4499837,4499944-4500030,4500153-4500245,
4501144-4501341,4501481-4501632,4501724-4501874,
4501975-4502073,4502159-4502326,4502624-4502702,
4502870-4503000
Length = 684
Score = 28.3 bits (60), Expect = 3.7
Identities = 22/77 (28%), Positives = 32/77 (41%)
Frame = -3
Query: 241 FCAFASTLVKINVGFFENNVGVPPANTFDSRHRKHNLAFAIDVRIHDTKNMLKFVWNDQR 62
F F V F + N+G+ P S ++ I+V + NML F+ ++
Sbjct: 111 FIGFREQDVSSLTNFMQKNMGLSPDEKQLSVSGQNWGGIDINVTLSIVGNMLTFMVGSKQ 170
Query: 61 HFG*VSNQRSQTQQQGK 11
F SQTQ QGK
Sbjct: 171 AFEVSLADVSQTQMQGK 187
>07_03_1085 - 23851852-23853165
Length = 437
Score = 27.9 bits (59), Expect = 5.0
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -1
Query: 81 LSGMTSDILVKFLTNVPKHNSRGNGKA 1
LSG T ++L KF ++PK + RG A
Sbjct: 160 LSGNTREVLHKFTVDLPKKHGRGGQSA 186
>03_01_0104 -
830884-831282,831511-832205,832368-833387,833570-833696,
834342-834709,834780-835059,835137-835466
Length = 1072
Score = 27.9 bits (59), Expect = 5.0
Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 2/75 (2%)
Frame = +2
Query: 167 GRRYSNIV--LKKADIDLDKRAGECTEXEVEKIITIMSNPXQYKIPDWFLNRQKDIVDGK 340
G+ + N++ LK D DL E K+ +MS P K+ W + D+ DGK
Sbjct: 514 GKPWRNVLEHLKIQDTDLWSSTNEDNCLWNAKLFPVMSLPETLKVGMWLMGSTCDL-DGK 572
Query: 341 YSQLTSSNLDSKLRE 385
+ L + L E
Sbjct: 573 VASLWKESRRISLEE 587
>02_05_1211 +
34956601-34956850,34956950-34957102,34957562-34957674,
34958092-34958198,34958289-34958404,34958502-34958577,
34958652-34958693,34958809-34958917,34959102-34959199,
34959297-34959390,34959517-34959642
Length = 427
Score = 27.9 bits (59), Expect = 5.0
Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Frame = +2
Query: 200 ADIDLDKRAGECTEXEVEKIITIMSNPXQYKIPDWFLNRQKDIVDGKYSQLTSSNLDS-- 373
+ +DLD R+G T V K T+ NP + ++ + + KD Y +LT+ N ++
Sbjct: 190 SSVDLDIRSGSNTRHVVLKRQTVTLNPVRSRMCE--IPGAKDNSKVGYIKLTTFNQNAAG 247
Query: 374 KLREXLERLKK 406
++E L++L++
Sbjct: 248 SVKEALQKLRE 258
>03_01_0646 + 4742398-4742994,4743681-4744085
Length = 333
Score = 27.5 bits (58), Expect = 6.5
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +1
Query: 142 CDDGYQRCWPEVLQHCSQKSR 204
CDD Y+R W +L+ ++SR
Sbjct: 296 CDDSYRRAWSRLLRRLVRESR 316
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,985,341
Number of Sequences: 37544
Number of extensions: 274146
Number of successful extensions: 693
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 679
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 693
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1083123860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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