Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_E04
(644 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 134 5e-32
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 134 5e-32
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 125 3e-29
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 125 3e-29
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 107 7e-24
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 107 7e-24
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 107 7e-24
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 85 4e-17
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 85 4e-17
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 73 2e-13
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 73 2e-13
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 73 2e-13
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 62 4e-10
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 62 4e-10
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 60 1e-09
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 60 1e-09
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 60 1e-09
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 60 1e-09
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 60 1e-09
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 60 1e-09
AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical ... 58 5e-09
Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical pr... 57 1e-08
Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical p... 57 1e-08
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 57 1e-08
Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical pr... 56 2e-08
EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA... 56 3e-08
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 55 5e-08
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 55 5e-08
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 54 9e-08
AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical ... 54 9e-08
AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical ... 54 9e-08
AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical ... 54 9e-08
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 54 1e-07
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 54 1e-07
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 53 2e-07
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 53 2e-07
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 53 2e-07
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 53 2e-07
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 52 3e-07
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 52 3e-07
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 52 5e-07
Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical pr... 52 5e-07
Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical pr... 52 5e-07
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 50 1e-06
U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna bi... 50 1e-06
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 50 1e-06
AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical... 49 2e-06
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 49 2e-06
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 49 3e-06
AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein... 48 6e-06
AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein... 48 6e-06
AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization... 48 6e-06
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 48 8e-06
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 46 2e-05
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 46 2e-05
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 46 2e-05
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 46 2e-05
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 46 2e-05
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 46 2e-05
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 46 2e-05
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 46 2e-05
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 45 5e-05
Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 45 5e-05
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 45 5e-05
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 44 9e-05
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 44 9e-05
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 44 1e-04
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 44 1e-04
U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 43 2e-04
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 43 2e-04
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 43 2e-04
U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical p... 43 2e-04
AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization... 43 2e-04
U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle orienta... 42 3e-04
AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein. 42 3e-04
U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical p... 41 7e-04
Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical p... 41 9e-04
U23484-7|ABB88232.1| 738|Caenorhabditis elegans Hypothetical pr... 39 0.003
AF003141-14|AAM48549.1| 362|Caenorhabditis elegans Hypothetical... 39 0.003
AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical... 39 0.003
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 38 0.005
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 38 0.005
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 38 0.005
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 38 0.005
AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya bi... 37 0.011
Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical pr... 37 0.014
Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical pr... 37 0.014
AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical ... 37 0.014
Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical pr... 36 0.019
Z19154-9|CAA79552.2| 559|Caenorhabditis elegans Hypothetical pr... 36 0.019
Z69384-5|CAA93419.2| 408|Caenorhabditis elegans Hypothetical pr... 35 0.043
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 35 0.057
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 35 0.057
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 35 0.057
Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical pr... 35 0.057
U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya bind... 35 0.057
DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding p... 35 0.057
U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical p... 34 0.099
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 34 0.099
Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical pr... 33 0.23
AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily a... 33 0.23
L07144-4|AAK21440.2| 187|Caenorhabditis elegans Hypothetical pr... 32 0.40
AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical ... 31 0.53
U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical p... 31 0.70
Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical pr... 31 0.92
Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical pr... 31 0.92
Z99279-4|CAB16494.1| 121|Caenorhabditis elegans Hypothetical pr... 30 1.2
U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein (sp... 30 1.2
U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein (spl... 30 1.2
U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein (spl... 30 1.2
Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical pr... 29 2.1
U28944-8|AAK68193.1| 103|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z99277-2|CAB16487.1| 557|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z68160-1|CAA92294.2| 489|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z46242-15|CAA86337.2| 2507|Caenorhabditis elegans Hypothetical p... 29 2.8
Z35598-8|CAA84657.2| 2507|Caenorhabditis elegans Hypothetical pr... 29 2.8
AF003140-8|AAB54169.1| 396|Caenorhabditis elegans Hypothetical ... 28 4.9
AC024791-14|AAF60658.1| 767|Caenorhabditis elegans P300/cbp ass... 28 4.9
Z69634-9|CAO82013.1| 575|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z69634-8|CAA93452.4| 591|Caenorhabditis elegans Hypothetical pr... 28 6.5
AF101318-12|AAC69350.2| 400|Caenorhabditis elegans Hypothetical... 28 6.5
AF099920-4|AAK29844.2| 363|Caenorhabditis elegans Serpentine re... 27 8.6
AF067619-1|AAC17568.2| 368|Caenorhabditis elegans Hypothetical ... 27 8.6
AC024746-7|AAF60403.1| 246|Caenorhabditis elegans Hypothetical ... 27 8.6
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 134 bits (324), Expect = 5e-32
Identities = 68/160 (42%), Positives = 95/160 (59%), Gaps = 1/160 (0%)
Frame = +2
Query: 125 TDNQLNGNAENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIXSI 304
TDN++NGNA ++ N G ++D+K+FVGG+S E +++L HF YGE+
Sbjct: 4 TDNKINGNAS----ETIKENGHSTKG-NEDKKIFVGGISPEVNNEDLSSHFTQYGEVAQA 58
Query: 305 NVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG-KIFVGGLS 481
VK D GRSRGFAF+ F E +AA E TI K V+ K AK+R K+FVGGL
Sbjct: 59 QVKYDRTNGRSRGFAFVEFTTGEGCKLALAAREQTIKGKSVEVKPAKSRENKKVFVGGLP 118
Query: 482 SEISDDEIRNFFSEFGTILXVEMPFDKTKNQXKGFCFITF 601
S+ S+ ++R+ F +FG + +E PFDK + F FI F
Sbjct: 119 SDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVF 158
Score = 66.9 bits (156), Expect = 1e-11
Identities = 34/88 (38%), Positives = 51/88 (57%)
Frame = +2
Query: 209 DDRKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESIDKV 388
+++K+FVGGL + ++++LR HF +G++ I D T R FAFIVF+ ES DK
Sbjct: 108 ENKKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKA 167
Query: 389 MAAGEHTINNKKVDPKKAKARHGKIFVG 472
+ + T ++ D KKA GK F G
Sbjct: 168 SSQTKQTFGTRECDVKKA-VPQGKRFPG 194
Score = 52.0 bits (119), Expect = 3e-07
Identities = 18/55 (32%), Positives = 37/55 (67%)
Frame = +2
Query: 458 KIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQXKGFCFITF*I*XSCK 622
KIFVGG+S E++++++ + F+++G + ++ +D+T + +GF F+ F CK
Sbjct: 30 KIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCK 84
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 134 bits (324), Expect = 5e-32
Identities = 68/160 (42%), Positives = 95/160 (59%), Gaps = 1/160 (0%)
Frame = +2
Query: 125 TDNQLNGNAENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIXSI 304
TDN++NGNA ++ N G ++D+K+FVGG+S E +++L HF YGE+
Sbjct: 4 TDNKINGNAS----ETIKENGHSTKG-NEDKKIFVGGISPEVNNEDLSSHFTQYGEVAQA 58
Query: 305 NVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG-KIFVGGLS 481
VK D GRSRGFAF+ F E +AA E TI K V+ K AK+R K+FVGGL
Sbjct: 59 QVKYDRTNGRSRGFAFVEFTTGEGCKLALAAREQTIKGKSVEVKPAKSRENKKVFVGGLP 118
Query: 482 SEISDDEIRNFFSEFGTILXVEMPFDKTKNQXKGFCFITF 601
S+ S+ ++R+ F +FG + +E PFDK + F FI F
Sbjct: 119 SDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVF 158
Score = 66.9 bits (156), Expect = 1e-11
Identities = 34/88 (38%), Positives = 51/88 (57%)
Frame = +2
Query: 209 DDRKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESIDKV 388
+++K+FVGGL + ++++LR HF +G++ I D T R FAFIVF+ ES DK
Sbjct: 108 ENKKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKA 167
Query: 389 MAAGEHTINNKKVDPKKAKARHGKIFVG 472
+ + T ++ D KKA GK F G
Sbjct: 168 SSQTKQTFGTRECDVKKA-VPQGKRFPG 194
Score = 52.0 bits (119), Expect = 3e-07
Identities = 18/55 (32%), Positives = 37/55 (67%)
Frame = +2
Query: 458 KIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQXKGFCFITF*I*XSCK 622
KIFVGG+S E++++++ + F+++G + ++ +D+T + +GF F+ F CK
Sbjct: 30 KIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCK 84
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 125 bits (301), Expect = 3e-29
Identities = 58/143 (40%), Positives = 87/143 (60%), Gaps = 9/143 (6%)
Frame = +2
Query: 200 GRDDDRKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESI 379
G D K+F+GGLSW+TT + LRD+FG +GE+ V DP T R+RGF FI F P S+
Sbjct: 40 GSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSV 99
Query: 380 DKVMAAGEHTINNKKVDPK---------KAKARHGKIFVGGLSSEISDDEIRNFFSEFGT 532
DKV+ EH ++ KK+DPK K + K+F+GGLS+ + ++++ +F +G
Sbjct: 100 DKVLNNREHELDGKKIDPKVAFPKRTQAKLVTKTKKVFIGGLSATSTLEDMKQYFETYGK 159
Query: 533 ILXVEMPFDKTKNQXKGFCFITF 601
+ + FDK + +GF F+TF
Sbjct: 160 VEDAMLMFDKATQRHRGFGFVTF 182
Score = 64.1 bits (149), Expect = 8e-11
Identities = 30/79 (37%), Positives = 47/79 (59%)
Frame = +2
Query: 215 RKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 394
+K+F+GGLS +T ++++ +F YG++ + D T R RGF F+ F + E DKV
Sbjct: 134 KKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCE 193
Query: 395 AGEHTINNKKVDPKKAKAR 451
H IN K V+ KKA+ +
Sbjct: 194 IHFHEINGKMVECKKAQPK 212
Score = 43.6 bits (98), Expect = 1e-04
Identities = 21/67 (31%), Positives = 34/67 (50%)
Frame = +2
Query: 401 EHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQXK 580
E +N D GK+F+GGLS + + + +R++F FG + + D + +
Sbjct: 27 EARLNADSDDGSHGSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRAR 86
Query: 581 GFCFITF 601
GF FITF
Sbjct: 87 GFGFITF 93
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 125 bits (301), Expect = 3e-29
Identities = 58/143 (40%), Positives = 87/143 (60%), Gaps = 9/143 (6%)
Frame = +2
Query: 200 GRDDDRKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESI 379
G D K+F+GGLSW+TT + LRD+FG +GE+ V DP T R+RGF FI F P S+
Sbjct: 40 GSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSV 99
Query: 380 DKVMAAGEHTINNKKVDPK---------KAKARHGKIFVGGLSSEISDDEIRNFFSEFGT 532
DKV+ EH ++ KK+DPK K + K+F+GGLS+ + ++++ +F +G
Sbjct: 100 DKVLNNREHELDGKKIDPKVAFPKRTQAKLVTKTKKVFIGGLSATSTLEDMKQYFETYGK 159
Query: 533 ILXVEMPFDKTKNQXKGFCFITF 601
+ + FDK + +GF F+TF
Sbjct: 160 VEDAMLMFDKATQRHRGFGFVTF 182
Score = 64.1 bits (149), Expect = 8e-11
Identities = 30/79 (37%), Positives = 47/79 (59%)
Frame = +2
Query: 215 RKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 394
+K+F+GGLS +T ++++ +F YG++ + D T R RGF F+ F + E DKV
Sbjct: 134 KKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCE 193
Query: 395 AGEHTINNKKVDPKKAKAR 451
H IN K V+ KKA+ +
Sbjct: 194 IHFHEINGKMVECKKAQPK 212
Score = 43.6 bits (98), Expect = 1e-04
Identities = 21/67 (31%), Positives = 34/67 (50%)
Frame = +2
Query: 401 EHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQXK 580
E +N D GK+F+GGLS + + + +R++F FG + + D + +
Sbjct: 27 EARLNADSDDGSHGSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRAR 86
Query: 581 GFCFITF 601
GF FITF
Sbjct: 87 GFGFITF 93
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 107 bits (257), Expect = 7e-24
Identities = 60/162 (37%), Positives = 89/162 (54%), Gaps = 11/162 (6%)
Frame = +2
Query: 149 AENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNT 328
AENG GD+ S E ++ RK+FVGGL+ TTD +R+ + +GEI I V DP T
Sbjct: 8 AENGSGDA----SLEP---ENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTT 60
Query: 329 GRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGK-----------IFVGG 475
RSRGF F+ F +D M H I+ K VDPK+A R K ++V G
Sbjct: 61 KRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSG 120
Query: 476 LSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQXKGFCFITF 601
+ + ++D + +F+++GT+ E+ DK + +GF F+TF
Sbjct: 121 VREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTF 162
Score = 51.2 bits (117), Expect = 6e-07
Identities = 21/79 (26%), Positives = 42/79 (53%)
Frame = +2
Query: 215 RKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 394
++L+V G+ + T+ L ++F YG + + D T + RGF F+ F +S+D+ +
Sbjct: 114 KRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVL 173
Query: 395 AGEHTINNKKVDPKKAKAR 451
H +N + D +K ++
Sbjct: 174 QKSHMVNGHRCDVRKGLSK 192
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 107 bits (257), Expect = 7e-24
Identities = 60/162 (37%), Positives = 89/162 (54%), Gaps = 11/162 (6%)
Frame = +2
Query: 149 AENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNT 328
AENG GD+ S E ++ RK+FVGGL+ TTD +R+ + +GEI I V DP T
Sbjct: 8 AENGSGDA----SLEP---ENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTT 60
Query: 329 GRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGK-----------IFVGG 475
RSRGF F+ F +D M H I+ K VDPK+A R K ++V G
Sbjct: 61 KRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSG 120
Query: 476 LSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQXKGFCFITF 601
+ + ++D + +F+++GT+ E+ DK + +GF F+TF
Sbjct: 121 VREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTF 162
Score = 51.2 bits (117), Expect = 6e-07
Identities = 21/79 (26%), Positives = 42/79 (53%)
Frame = +2
Query: 215 RKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 394
++L+V G+ + T+ L ++F YG + + D T + RGF F+ F +S+D+ +
Sbjct: 114 KRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVL 173
Query: 395 AGEHTINNKKVDPKKAKAR 451
H +N + D +K ++
Sbjct: 174 QKSHMVNGHRCDVRKGLSK 192
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 107 bits (257), Expect = 7e-24
Identities = 60/162 (37%), Positives = 89/162 (54%), Gaps = 11/162 (6%)
Frame = +2
Query: 149 AENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNT 328
AENG GD+ S E ++ RK+FVGGL+ TTD +R+ + +GEI I V DP T
Sbjct: 8 AENGSGDA----SLEP---ENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTT 60
Query: 329 GRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGK-----------IFVGG 475
RSRGF F+ F +D M H I+ K VDPK+A R K ++V G
Sbjct: 61 KRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSG 120
Query: 476 LSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQXKGFCFITF 601
+ + ++D + +F+++GT+ E+ DK + +GF F+TF
Sbjct: 121 VREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTF 162
Score = 51.2 bits (117), Expect = 6e-07
Identities = 21/79 (26%), Positives = 42/79 (53%)
Frame = +2
Query: 215 RKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 394
++L+V G+ + T+ L ++F YG + + D T + RGF F+ F +S+D+ +
Sbjct: 114 KRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVL 173
Query: 395 AGEHTINNKKVDPKKAKAR 451
H +N + D +K ++
Sbjct: 174 QKSHMVNGHRCDVRKGLSK 192
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 85.0 bits (201), Expect = 4e-17
Identities = 42/124 (33%), Positives = 66/124 (53%), Gaps = 11/124 (8%)
Frame = +2
Query: 263 LRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKA 442
+R+ + +GEI I V DP T RSRGF F+ F +D M H I+ K VDPK+A
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRA 60
Query: 443 KARHGK-----------IFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQXKGFC 589
R K ++V G+ + ++D + +F+++GT+ E+ DK + +GF
Sbjct: 61 VPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFG 120
Query: 590 FITF 601
F+TF
Sbjct: 121 FVTF 124
Score = 51.2 bits (117), Expect = 6e-07
Identities = 21/79 (26%), Positives = 42/79 (53%)
Frame = +2
Query: 215 RKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 394
++L+V G+ + T+ L ++F YG + + D T + RGF F+ F +S+D+ +
Sbjct: 76 KRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVL 135
Query: 395 AGEHTINNKKVDPKKAKAR 451
H +N + D +K ++
Sbjct: 136 QKSHMVNGHRCDVRKGLSK 154
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 85.0 bits (201), Expect = 4e-17
Identities = 42/124 (33%), Positives = 66/124 (53%), Gaps = 11/124 (8%)
Frame = +2
Query: 263 LRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKA 442
+R+ + +GEI I V DP T RSRGF F+ F +D M H I+ K VDPK+A
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRA 60
Query: 443 KARHGK-----------IFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQXKGFC 589
R K ++V G+ + ++D + +F+++GT+ E+ DK + +GF
Sbjct: 61 VPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFG 120
Query: 590 FITF 601
F+TF
Sbjct: 121 FVTF 124
Score = 51.2 bits (117), Expect = 6e-07
Identities = 21/79 (26%), Positives = 42/79 (53%)
Frame = +2
Query: 215 RKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 394
++L+V G+ + T+ L ++F YG + + D T + RGF F+ F +S+D+ +
Sbjct: 76 KRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVL 135
Query: 395 AGEHTINNKKVDPKKAKAR 451
H +N + D +K ++
Sbjct: 136 QKSHMVNGHRCDVRKGLSK 154
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 72.5 bits (170), Expect = 2e-13
Identities = 45/131 (34%), Positives = 68/131 (51%), Gaps = 19/131 (14%)
Frame = +2
Query: 215 RKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 394
RKLF+GGLS +TTD++L ++F +G + V DPNT SRGF F+ F + S + M
Sbjct: 49 RKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMN 108
Query: 395 AGEHTINNKKVDPKKAKARHG------------------KIFVGGLSSEI-SDDEIRNFF 517
H + K VD K+A R K+ + G+++ + S D +R +F
Sbjct: 109 DRPHKLGGKTVDSKRAIPREQMSSMIPPPFFETDPAPGCKLLLNGITNGVHSVDSLRVYF 168
Query: 518 SEFGTILXVEM 550
FGT+ VE+
Sbjct: 169 ETFGTLDQVEI 179
Score = 45.6 bits (103), Expect = 3e-05
Identities = 17/48 (35%), Positives = 32/48 (66%)
Frame = +2
Query: 458 KIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQXKGFCFITF 601
K+F+GGLS + +D+++ N+FS++G ++ + D +GF F+TF
Sbjct: 50 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTF 97
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 72.5 bits (170), Expect = 2e-13
Identities = 45/131 (34%), Positives = 68/131 (51%), Gaps = 19/131 (14%)
Frame = +2
Query: 215 RKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 394
RKLF+GGLS +TTD++L ++F +G + V DPNT SRGF F+ F + S + M
Sbjct: 69 RKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMN 128
Query: 395 AGEHTINNKKVDPKKAKARHG------------------KIFVGGLSSEI-SDDEIRNFF 517
H + K VD K+A R K+ + G+++ + S D +R +F
Sbjct: 129 DRPHKLGGKTVDSKRAIPREQMSSMIPPPFFETDPAPGCKLLLNGITNGVHSVDSLRVYF 188
Query: 518 SEFGTILXVEM 550
FGT+ VE+
Sbjct: 189 ETFGTLDQVEI 199
Score = 45.6 bits (103), Expect = 3e-05
Identities = 17/48 (35%), Positives = 32/48 (66%)
Frame = +2
Query: 458 KIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQXKGFCFITF 601
K+F+GGLS + +D+++ N+FS++G ++ + D +GF F+TF
Sbjct: 70 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTF 117
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 72.5 bits (170), Expect = 2e-13
Identities = 45/131 (34%), Positives = 68/131 (51%), Gaps = 19/131 (14%)
Frame = +2
Query: 215 RKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 394
RKLF+GGLS +TTD++L ++F +G + V DPNT SRGF F+ F + S + M
Sbjct: 70 RKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMN 129
Query: 395 AGEHTINNKKVDPKKAKARHG------------------KIFVGGLSSEI-SDDEIRNFF 517
H + K VD K+A R K+ + G+++ + S D +R +F
Sbjct: 130 DRPHKLGGKTVDSKRAIPREQMSSMIPPPFFETDPAPGCKLLLNGITNGVHSVDSLRVYF 189
Query: 518 SEFGTILXVEM 550
FGT+ VE+
Sbjct: 190 ETFGTLDQVEI 200
Score = 45.6 bits (103), Expect = 3e-05
Identities = 17/48 (35%), Positives = 32/48 (66%)
Frame = +2
Query: 458 KIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQXKGFCFITF 601
K+F+GGLS + +D+++ N+FS++G ++ + D +GF F+TF
Sbjct: 71 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTF 118
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 61.7 bits (143), Expect = 4e-10
Identities = 42/141 (29%), Positives = 63/141 (44%), Gaps = 8/141 (5%)
Frame = +2
Query: 203 RDDDRKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESID 382
R+ D ++VGGL + ++ L + G + S+N+ D T +GF F+ F E D
Sbjct: 9 RNQDATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDAD 68
Query: 383 -KVMAAGEHTINNKKVDPKKAKARH------GKIFVGGLSSEISDDEIRNFFSEFGTILX 541
+ + K + KA A IFVG L E+ + + + FS FG IL
Sbjct: 69 YAIKILNMIKLYGKPIKVNKASAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQ 128
Query: 542 V-EMPFDKTKNQXKGFCFITF 601
V ++ D KGF FI F
Sbjct: 129 VPKIMRDVDSGTSKGFAFINF 149
Score = 47.2 bits (107), Expect = 1e-05
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Frame = +2
Query: 185 SAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIXSI-NVKTDPNTGRSRGFAFIVF 361
SA D +FVG L E +K L D F A+G I + + D ++G S+GFAFI F
Sbjct: 90 SAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINF 149
Query: 362 KAPESIDKVMAA 397
+ E+ D + A
Sbjct: 150 ASFEASDTALEA 161
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 61.7 bits (143), Expect = 4e-10
Identities = 42/141 (29%), Positives = 63/141 (44%), Gaps = 8/141 (5%)
Frame = +2
Query: 203 RDDDRKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESID 382
R+ D ++VGGL + ++ L + G + S+N+ D T +GF F+ F E D
Sbjct: 19 RNQDATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDAD 78
Query: 383 -KVMAAGEHTINNKKVDPKKAKARH------GKIFVGGLSSEISDDEIRNFFSEFGTILX 541
+ + K + KA A IFVG L E+ + + + FS FG IL
Sbjct: 79 YAIKILNMIKLYGKPIKVNKASAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQ 138
Query: 542 V-EMPFDKTKNQXKGFCFITF 601
V ++ D KGF FI F
Sbjct: 139 VPKIMRDVDSGTSKGFAFINF 159
Score = 47.2 bits (107), Expect = 1e-05
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Frame = +2
Query: 185 SAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIXSI-NVKTDPNTGRSRGFAFIVF 361
SA D +FVG L E +K L D F A+G I + + D ++G S+GFAFI F
Sbjct: 100 SAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINF 159
Query: 362 KAPESIDKVMAA 397
+ E+ D + A
Sbjct: 160 ASFEASDTALEA 171
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 60.1 bits (139), Expect = 1e-09
Identities = 41/153 (26%), Positives = 75/153 (49%), Gaps = 11/153 (7%)
Frame = +2
Query: 176 DHNSAEAPGRDDDR--KLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFA 349
D++ + +P D K+FVG + + + + R F YG + S N+ D +T S+G
Sbjct: 40 DNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCC 99
Query: 350 FIVF-KAPESID--------KVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDE 502
F+ F ++I+ KV+ H + K D + R K+F+G LS + +++
Sbjct: 100 FVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEEN 157
Query: 503 IRNFFSEFGTILXVEMPFDKTKNQXKGFCFITF 601
+R F++FG I + D+ + +G F+TF
Sbjct: 158 LREIFAKFGHIEDCSVLRDQ-DGKSRGCAFVTF 189
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 60.1 bits (139), Expect = 1e-09
Identities = 41/153 (26%), Positives = 75/153 (49%), Gaps = 11/153 (7%)
Frame = +2
Query: 176 DHNSAEAPGRDDDR--KLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFA 349
D++ + +P D K+FVG + + + + R F YG + S N+ D +T S+G
Sbjct: 40 DNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCC 99
Query: 350 FIVF-KAPESID--------KVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDE 502
F+ F ++I+ KV+ H + K D + R K+F+G LS + +++
Sbjct: 100 FVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEEN 157
Query: 503 IRNFFSEFGTILXVEMPFDKTKNQXKGFCFITF 601
+R F++FG I + D+ + +G F+TF
Sbjct: 158 LREIFAKFGHIEDCSVLRDQ-DGKSRGCAFVTF 189
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 60.1 bits (139), Expect = 1e-09
Identities = 41/153 (26%), Positives = 75/153 (49%), Gaps = 11/153 (7%)
Frame = +2
Query: 176 DHNSAEAPGRDDDR--KLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFA 349
D++ + +P D K+FVG + + + + R F YG + S N+ D +T S+G
Sbjct: 40 DNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCC 99
Query: 350 FIVF-KAPESID--------KVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDE 502
F+ F ++I+ KV+ H + K D + R K+F+G LS + +++
Sbjct: 100 FVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEEN 157
Query: 503 IRNFFSEFGTILXVEMPFDKTKNQXKGFCFITF 601
+R F++FG I + D+ + +G F+TF
Sbjct: 158 LREIFAKFGHIEDCSVLRDQ-DGKSRGCAFVTF 189
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 60.1 bits (139), Expect = 1e-09
Identities = 41/153 (26%), Positives = 75/153 (49%), Gaps = 11/153 (7%)
Frame = +2
Query: 176 DHNSAEAPGRDDDR--KLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFA 349
D++ + +P D K+FVG + + + + R F YG + S N+ D +T S+G
Sbjct: 40 DNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCC 99
Query: 350 FIVF-KAPESID--------KVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDE 502
F+ F ++I+ KV+ H + K D + R K+F+G LS + +++
Sbjct: 100 FVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEEN 157
Query: 503 IRNFFSEFGTILXVEMPFDKTKNQXKGFCFITF 601
+R F++FG I + D+ + +G F+TF
Sbjct: 158 LREIFAKFGHIEDCSVLRDQ-DGKSRGCAFVTF 189
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 60.1 bits (139), Expect = 1e-09
Identities = 41/153 (26%), Positives = 75/153 (49%), Gaps = 11/153 (7%)
Frame = +2
Query: 176 DHNSAEAPGRDDDR--KLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFA 349
D++ + +P D K+FVG + + + + R F YG + S N+ D +T S+G
Sbjct: 40 DNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCC 99
Query: 350 FIVF-KAPESID--------KVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDE 502
F+ F ++I+ KV+ H + K D + R K+F+G LS + +++
Sbjct: 100 FVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEEN 157
Query: 503 IRNFFSEFGTILXVEMPFDKTKNQXKGFCFITF 601
+R F++FG I + D+ + +G F+TF
Sbjct: 158 LREIFAKFGHIEDCSVLRDQ-DGKSRGCAFVTF 189
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 60.1 bits (139), Expect = 1e-09
Identities = 41/153 (26%), Positives = 75/153 (49%), Gaps = 11/153 (7%)
Frame = +2
Query: 176 DHNSAEAPGRDDDR--KLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFA 349
D++ + +P D K+FVG + + + + R F YG + S N+ D +T S+G
Sbjct: 40 DNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCC 99
Query: 350 FIVF-KAPESID--------KVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDE 502
F+ F ++I+ KV+ H + K D + R K+F+G LS + +++
Sbjct: 100 FVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEEN 157
Query: 503 IRNFFSEFGTILXVEMPFDKTKNQXKGFCFITF 601
+R F++FG I + D+ + +G F+TF
Sbjct: 158 LREIFAKFGHIEDCSVLRDQ-DGKSRGCAFVTF 189
>AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical
protein T08B6.5 protein.
Length = 177
Score = 58.0 bits (134), Expect = 5e-09
Identities = 23/81 (28%), Positives = 43/81 (53%)
Frame = +2
Query: 185 SAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFK 364
+AE + D R ++VG + W++T E+ +HF G++ + + D TG + FAF+ F+
Sbjct: 36 TAEEQEKTDARSVYVGNVDWKSTVSEIEEHFAVCGKVARVTIPKDKFTGYQKNFAFVEFQ 95
Query: 365 APESIDKVMAAGEHTINNKKV 427
ES+ + N+K+
Sbjct: 96 KLESVQLALVLSGTMFRNRKI 116
>Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical
protein C50B8.1 protein.
Length = 114
Score = 56.8 bits (131), Expect = 1e-08
Identities = 26/80 (32%), Positives = 44/80 (55%)
Frame = +2
Query: 191 EAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAP 370
EA ++ + +++ + W T +L +F YG I S+N+ DP+TG RGFA I F +
Sbjct: 17 EARPKNTGQTVYLTHVKWVTGKSQLEHYFKRYGSIQSVNMFYDPDTGLHRGFASITFDSK 76
Query: 371 ESIDKVMAAGEHTINNKKVD 430
+ +K + H I+ +VD
Sbjct: 77 DGANKAIEQRPHVIDGDRVD 96
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/65 (23%), Positives = 29/65 (44%)
Frame = +2
Query: 407 TINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQXKGF 586
T N K+ + K +++ + ++ ++F +G+I V M +D +GF
Sbjct: 9 TTNISKLIEARPKNTGQTVYLTHVKWVTGKSQLEHYFKRYGSIQSVNMFYDPDTGLHRGF 68
Query: 587 CFITF 601
ITF
Sbjct: 69 ASITF 73
>Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical
protein B0035.12 protein.
Length = 836
Score = 56.8 bits (131), Expect = 1e-08
Identities = 41/149 (27%), Positives = 68/149 (45%), Gaps = 13/149 (8%)
Frame = +2
Query: 194 APGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGR-SRGFAFIVFKAP 370
APG +D R +FV L + TT+ E+R A + SI N+ RGFA++V +
Sbjct: 586 APGTEDARTIFVSNLDFTTTEDEIRQ---AIEGVASIRFARKANSDLVHRGFAYVVMEND 642
Query: 371 ESIDKVMAAGEHTINNKKV-----DPKK-------AKARHGKIFVGGLSSEISDDEIRNF 514
+ + + + + + DP+K K+FV + + +DDE++
Sbjct: 643 QKAQQALLKDRVPVKGRPMFISANDPEKRVGFKFSTTLEKSKVFVRNVHFQATDDELKAL 702
Query: 515 FSEFGTILXVEMPFDKTKNQXKGFCFITF 601
FS+FGT+ V K + KG F+ F
Sbjct: 703 FSKFGTVTSVRRVTHK-DGKPKGIAFVDF 730
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 56.8 bits (131), Expect = 1e-08
Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 2/89 (2%)
Frame = +2
Query: 170 SQDHNSAEAPGRDDDR--KLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRG 343
+Q N+ G D K+FVGGL + T+DK L ++F +G+I V TD NT +SRG
Sbjct: 18 AQSTNAEPVVGSRDTMFTKIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRG 77
Query: 344 FAFIVFKAPESIDKVMAAGEHTINNKKVD 430
+ F+ K S ++ I+ +K +
Sbjct: 78 YGFVTMKDRASAERACKDPNPIIDGRKAN 106
Score = 38.7 bits (86), Expect = 0.003
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +2
Query: 458 KIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQXKGFCFIT 598
KIFVGGL SD + +F +FG I + D+ + +G+ F+T
Sbjct: 36 KIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVT 82
>Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical
protein C17E4.5 protein.
Length = 205
Score = 56.0 bits (129), Expect = 2e-08
Identities = 26/103 (25%), Positives = 50/103 (48%), Gaps = 2/103 (1%)
Frame = +2
Query: 137 LNGNAENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIXSINVKT 316
+N N + SQ + E D + ++VG + + T +E+ HF G + + ++
Sbjct: 52 MNLNTSSQSNSSQSLLTPEEKAEADAKSVYVGNVDYGATAEEIEQHFHGCGSVSRVTIQC 111
Query: 317 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNK--KVDPKK 439
D +G +GFA++ F E + +A + + + KVDPK+
Sbjct: 112 DRFSGHPKGFAYVEFTEKEGMQNALAMTDSLLRGRQIKVDPKR 154
Score = 33.1 bits (72), Expect = 0.17
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = +2
Query: 434 KKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQXKGFCFITF 601
+KA+A ++VG + + +EI F G++ V + D+ KGF ++ F
Sbjct: 71 EKAEADAKSVYVGNVDYGATAEEIEQHFHGCGSVSRVTIQCDRFSGHPKGFAYVEF 126
>EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA
binding protein variantB protein.
Length = 193
Score = 55.6 bits (128), Expect = 3e-08
Identities = 36/131 (27%), Positives = 65/131 (49%), Gaps = 11/131 (8%)
Frame = +2
Query: 176 DHNSAEAPGRDDDR--KLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFA 349
D++ + +P D K+FVG + + + + R F YG + S N+ D +T S+G
Sbjct: 40 DNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCC 99
Query: 350 FIVF-KAPESID--------KVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDE 502
F+ F ++I+ KV+ H + K D + R K+F+G LS + +++
Sbjct: 100 FVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEEN 157
Query: 503 IRNFFSEFGTI 535
+R F++FG I
Sbjct: 158 LREIFAKFGHI 168
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/63 (26%), Positives = 32/63 (50%)
Frame = +2
Query: 413 NNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQXKGFCF 592
N+ P + K+FVG + + ++ + R F ++G++ + DK+ KG CF
Sbjct: 41 NDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCF 100
Query: 593 ITF 601
+TF
Sbjct: 101 VTF 103
Score = 36.7 bits (81), Expect = 0.014
Identities = 18/45 (40%), Positives = 29/45 (64%)
Frame = +2
Query: 209 DDRKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRG 343
++RKLF+G LS + ++ LR+ F +G I +V D + G+SRG
Sbjct: 140 NERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQD-GKSRG 183
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 54.8 bits (126), Expect = 5e-08
Identities = 39/135 (28%), Positives = 63/135 (46%), Gaps = 8/135 (5%)
Frame = +2
Query: 221 LFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESIDKVM-AA 397
L+VG L + + L + F A G + SI V D T S G+A++ F+ P ++ M
Sbjct: 34 LYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMDTM 93
Query: 398 GEHTINNKKV-------DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPF 556
++ K + DP ++ G IF+ L I + I + FS FG IL ++
Sbjct: 94 NFEALHGKPMRIMWSQRDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAI 153
Query: 557 DKTKNQXKGFCFITF 601
D+ KG+ F+ F
Sbjct: 154 DE-DGFSKGYGFVHF 167
Score = 46.4 bits (105), Expect = 2e-05
Identities = 25/66 (37%), Positives = 34/66 (51%)
Frame = +2
Query: 176 DHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFI 355
+ + AE + L+V L D L+ F +YG I S V TD N GRS+GF F+
Sbjct: 304 EQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDEN-GRSKGFGFV 362
Query: 356 VFKAPE 373
F+ PE
Sbjct: 363 CFEKPE 368
Score = 34.3 bits (75), Expect = 0.075
Identities = 36/135 (26%), Positives = 55/135 (40%), Gaps = 26/135 (19%)
Frame = +2
Query: 275 FGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESID-KVMAAGEHTIN------------ 415
F +G I S V T G+S+GF F+ F PE + V A + TI
Sbjct: 233 FAKFGNITSCEVMTVE--GKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHVCRAQ 290
Query: 416 ---------NKKVDPKKA----KARHGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPF 556
KK + KA K + ++V L + DD ++ F +G I ++
Sbjct: 291 KKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMT 350
Query: 557 DKTKNQXKGFCFITF 601
D+ + KGF F+ F
Sbjct: 351 DE-NGRSKGFGFVCF 364
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 54.8 bits (126), Expect = 5e-08
Identities = 39/135 (28%), Positives = 63/135 (46%), Gaps = 8/135 (5%)
Frame = +2
Query: 221 LFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESIDKVM-AA 397
L+VG L + + L + F A G + SI V D T S G+A++ F+ P ++ M
Sbjct: 34 LYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMDTM 93
Query: 398 GEHTINNKKV-------DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPF 556
++ K + DP ++ G IF+ L I + I + FS FG IL ++
Sbjct: 94 NFEALHGKPMRIMWSQRDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAI 153
Query: 557 DKTKNQXKGFCFITF 601
D+ KG+ F+ F
Sbjct: 154 DE-DGFSKGYGFVHF 167
Score = 46.4 bits (105), Expect = 2e-05
Identities = 25/66 (37%), Positives = 34/66 (51%)
Frame = +2
Query: 176 DHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFI 355
+ + AE + L+V L D L+ F +YG I S V TD N GRS+GF F+
Sbjct: 304 EQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDEN-GRSKGFGFV 362
Query: 356 VFKAPE 373
F+ PE
Sbjct: 363 CFEKPE 368
Score = 34.3 bits (75), Expect = 0.075
Identities = 36/135 (26%), Positives = 55/135 (40%), Gaps = 26/135 (19%)
Frame = +2
Query: 275 FGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESID-KVMAAGEHTIN------------ 415
F +G I S V T G+S+GF F+ F PE + V A + TI
Sbjct: 233 FAKFGNITSCEVMTVE--GKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHVCRAQ 290
Query: 416 ---------NKKVDPKKA----KARHGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPF 556
KK + KA K + ++V L + DD ++ F +G I ++
Sbjct: 291 KKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMT 350
Query: 557 DKTKNQXKGFCFITF 601
D+ + KGF F+ F
Sbjct: 351 DE-NGRSKGFGFVCF 364
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 54.0 bits (124), Expect = 9e-08
Identities = 38/146 (26%), Positives = 69/146 (47%), Gaps = 12/146 (8%)
Frame = +2
Query: 200 GRDDDRKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVF------ 361
G D+ R L+VG L T+ + F G + V D G + +AF+ F
Sbjct: 41 GSDEPRTLYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFD---GSNDPYAFVEFSDHGQA 97
Query: 362 -KAPESIDKVMAAGEHTINNKKVDPKKAKA-----RHGKIFVGGLSSEISDDEIRNFFSE 523
+A ++++K + N V+P + ++ RH +FVG LSSE+ + ++R F
Sbjct: 98 SQALQTMNKRLLLDREMKVNWAVEPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQP 157
Query: 524 FGTILXVEMPFDKTKNQXKGFCFITF 601
FG + ++ D + KG+ F+++
Sbjct: 158 FGDVSDAKVIRDTNTTKSKGYGFVSY 183
Score = 46.0 bits (104), Expect = 2e-05
Identities = 36/136 (26%), Positives = 63/136 (46%), Gaps = 26/136 (19%)
Frame = +2
Query: 221 LFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESIDKVMA-- 394
+FVG LS E +++LR+ F +G++ V D NT +S+G+ F+ + E ++ +
Sbjct: 137 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 196
Query: 395 ----AGEHTI------------------NNKKVDP--KKAKARHGKIFVGGLSSEISDDE 502
G TI N K D + + ++VG ++S +++DE
Sbjct: 197 NGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIAS-LTEDE 255
Query: 503 IRNFFSEFGTILXVEM 550
IR F+ FG I V +
Sbjct: 256 IRQGFASFGRITEVRI 271
>AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical
protein F29C4.7b protein.
Length = 423
Score = 54.0 bits (124), Expect = 9e-08
Identities = 40/157 (25%), Positives = 70/157 (44%), Gaps = 9/157 (5%)
Frame = +2
Query: 104 NFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDD---RKLFVGGLSWETTDKELRDH 274
N AQ + G+ G S +DDD R LFVG + + ++E+R
Sbjct: 129 NRAQHGADSKREGGSGSGNRGRPTKEPSTWRLKQDDDEATRTLFVGNMPSDVKEREIRHV 188
Query: 275 FGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH 454
F +G++ +++KT NT +AF++F+ + + A E + + K +
Sbjct: 189 FEEHGKVEEVDIKTPINT--DAAYAFVMFQTVD--QAIQAKAEEQDRPIRAGGSRMKIGY 244
Query: 455 GK------IFVGGLSSEISDDEIRNFFSEFGTILXVE 547
GK +FVGGL S + ++ F EFG + ++
Sbjct: 245 GKSQVSRRLFVGGLGSWCDKEILQKAFGEFGFVENID 281
Score = 30.7 bits (66), Expect = 0.92
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +2
Query: 461 IFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTK-NQXKGFCFITF 601
+FVG + S++ + EIR+ F E G + V++ KT N + F+ F
Sbjct: 171 LFVGNMPSDVKEREIRHVFEEHGKVEEVDI---KTPINTDAAYAFVMF 215
>AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical
protein F29C4.7a protein.
Length = 520
Score = 54.0 bits (124), Expect = 9e-08
Identities = 40/157 (25%), Positives = 70/157 (44%), Gaps = 9/157 (5%)
Frame = +2
Query: 104 NFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDD---RKLFVGGLSWETTDKELRDH 274
N AQ + G+ G S +DDD R LFVG + + ++E+R
Sbjct: 129 NRAQHGADSKREGGSGSGNRGRPTKEPSTWRLKQDDDEATRTLFVGNMPSDVKEREIRHV 188
Query: 275 FGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH 454
F +G++ +++KT NT +AF++F+ + + A E + + K +
Sbjct: 189 FEEHGKVEEVDIKTPINT--DAAYAFVMFQTVD--QAIQAKAEEQDRPIRAGGSRMKIGY 244
Query: 455 GK------IFVGGLSSEISDDEIRNFFSEFGTILXVE 547
GK +FVGGL S + ++ F EFG + ++
Sbjct: 245 GKSQVSRRLFVGGLGSWCDKEILQKAFGEFGFVENID 281
Score = 30.7 bits (66), Expect = 0.92
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +2
Query: 461 IFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTK-NQXKGFCFITF 601
+FVG + S++ + EIR+ F E G + V++ KT N + F+ F
Sbjct: 171 LFVGNMPSDVKEREIRHVFEEHGKVEEVDI---KTPINTDAAYAFVMF 215
>AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical
protein F29C4.7c protein.
Length = 497
Score = 54.0 bits (124), Expect = 9e-08
Identities = 40/157 (25%), Positives = 70/157 (44%), Gaps = 9/157 (5%)
Frame = +2
Query: 104 NFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDD---RKLFVGGLSWETTDKELRDH 274
N AQ + G+ G S +DDD R LFVG + + ++E+R
Sbjct: 106 NRAQHGADSKREGGSGSGNRGRPTKEPSTWRLKQDDDEATRTLFVGNMPSDVKEREIRHV 165
Query: 275 FGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH 454
F +G++ +++KT NT +AF++F+ + + A E + + K +
Sbjct: 166 FEEHGKVEEVDIKTPINT--DAAYAFVMFQTVD--QAIQAKAEEQDRPIRAGGSRMKIGY 221
Query: 455 GK------IFVGGLSSEISDDEIRNFFSEFGTILXVE 547
GK +FVGGL S + ++ F EFG + ++
Sbjct: 222 GKSQVSRRLFVGGLGSWCDKEILQKAFGEFGFVENID 258
Score = 30.7 bits (66), Expect = 0.92
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +2
Query: 461 IFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTK-NQXKGFCFITF 601
+FVG + S++ + EIR+ F E G + V++ KT N + F+ F
Sbjct: 148 LFVGNMPSDVKEREIRHVFEEHGKVEEVDI---KTPINTDAAYAFVMF 192
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 53.6 bits (123), Expect = 1e-07
Identities = 36/135 (26%), Positives = 64/135 (47%), Gaps = 8/135 (5%)
Frame = +2
Query: 221 LFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESIDKVM-AA 397
L++G L + ++ L + F G + SI V D + S G+A++ F+ P ++ +
Sbjct: 59 LYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERALDTM 118
Query: 398 GEHTINNKKV-------DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPF 556
I+ + + DP +A +G IF+ L I + + + FS FG IL ++
Sbjct: 119 NFEVIHGRPMRIMWSQRDPAARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVAT 178
Query: 557 DKTKNQXKGFCFITF 601
D N KG+ F+ F
Sbjct: 179 DDEGNS-KGYGFVHF 192
Score = 50.0 bits (114), Expect = 1e-06
Identities = 23/51 (45%), Positives = 31/51 (60%)
Frame = +2
Query: 221 LFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPE 373
L+V + + D LRDHF ++G I S V D N GRS+GF F+ F+ PE
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDEN-GRSKGFGFVCFEKPE 394
Score = 48.0 bits (109), Expect = 6e-06
Identities = 38/150 (25%), Positives = 66/150 (44%), Gaps = 14/150 (9%)
Frame = +2
Query: 194 APGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPE 373
A R + +F+ L +K + D F +G I S V TD + G S+G+ F+ F+
Sbjct: 138 AARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATD-DEGNSKGYGFVHFETEH 196
Query: 374 S----IDKV--MAAGEHTINNKKVDPKKAKAR--------HGKIFVGGLSSEISDDEIRN 511
S I+KV M + + K P+ + + + +FV + +++
Sbjct: 197 SAQTAIEKVNGMLLSDKKVYVGKFQPRAQRMKELGESGLKYTNVFVKNFGEHLDQEKLSA 256
Query: 512 FFSEFGTILXVEMPFDKTKNQXKGFCFITF 601
FS+FG I + D + + KGF F+ F
Sbjct: 257 MFSKFGEITSAVVMTD-AQGKPKGFGFVAF 285
Score = 40.3 bits (90), Expect = 0.001
Identities = 37/153 (24%), Positives = 67/153 (43%), Gaps = 26/153 (16%)
Frame = +2
Query: 221 LFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVF-------KAPESI 379
+FV ++L F +GEI S V TD G+ +GF F+ F +A E +
Sbjct: 240 VFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQ-GKPKGFGFVAFADQDAAGQAVEKL 298
Query: 380 -DKVMAAGEHTINNKKVDPKKAKARHGK------------------IFVGGLSSEISDDE 502
D ++ + ++ + K ++ K ++V + +++DD
Sbjct: 299 NDSILEGTDCKLSVCRAQKKSERSAELKRKYEALKQERVQRYQGVNLYVKNIEEDLNDDG 358
Query: 503 IRNFFSEFGTILXVEMPFDKTKNQXKGFCFITF 601
+R+ FS FGTI ++ D+ + KGF F+ F
Sbjct: 359 LRDHFSSFGTITSAKVMVDE-NGRSKGFGFVCF 390
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 53.6 bits (123), Expect = 1e-07
Identities = 36/135 (26%), Positives = 64/135 (47%), Gaps = 8/135 (5%)
Frame = +2
Query: 221 LFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESIDKVM-AA 397
L++G L + ++ L + F G + SI V D + S G+A++ F+ P ++ +
Sbjct: 59 LYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERALDTM 118
Query: 398 GEHTINNKKV-------DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPF 556
I+ + + DP +A +G IF+ L I + + + FS FG IL ++
Sbjct: 119 NFEVIHGRPMRIMWSQRDPAARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVAT 178
Query: 557 DKTKNQXKGFCFITF 601
D N KG+ F+ F
Sbjct: 179 DDEGNS-KGYGFVHF 192
Score = 50.0 bits (114), Expect = 1e-06
Identities = 23/51 (45%), Positives = 31/51 (60%)
Frame = +2
Query: 221 LFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPE 373
L+V + + D LRDHF ++G I S V D N GRS+GF F+ F+ PE
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDEN-GRSKGFGFVCFEKPE 394
Score = 48.0 bits (109), Expect = 6e-06
Identities = 38/150 (25%), Positives = 66/150 (44%), Gaps = 14/150 (9%)
Frame = +2
Query: 194 APGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPE 373
A R + +F+ L +K + D F +G I S V TD + G S+G+ F+ F+
Sbjct: 138 AARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATD-DEGNSKGYGFVHFETEH 196
Query: 374 S----IDKV--MAAGEHTINNKKVDPKKAKAR--------HGKIFVGGLSSEISDDEIRN 511
S I+KV M + + K P+ + + + +FV + +++
Sbjct: 197 SAQTAIEKVNGMLLSDKKVYVGKFQPRAQRMKELGESGLKYTNVFVKNFGEHLDQEKLSA 256
Query: 512 FFSEFGTILXVEMPFDKTKNQXKGFCFITF 601
FS+FG I + D + + KGF F+ F
Sbjct: 257 MFSKFGEITSAVVMTD-AQGKPKGFGFVAF 285
Score = 40.3 bits (90), Expect = 0.001
Identities = 37/153 (24%), Positives = 67/153 (43%), Gaps = 26/153 (16%)
Frame = +2
Query: 221 LFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVF-------KAPESI 379
+FV ++L F +GEI S V TD G+ +GF F+ F +A E +
Sbjct: 240 VFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQ-GKPKGFGFVAFADQDAAGQAVEKL 298
Query: 380 -DKVMAAGEHTINNKKVDPKKAKARHGK------------------IFVGGLSSEISDDE 502
D ++ + ++ + K ++ K ++V + +++DD
Sbjct: 299 NDSILEGTDCKLSVCRAQKKSERSAELKRKYEALKQERVQRYQGVNLYVKNIEEDLNDDG 358
Query: 503 IRNFFSEFGTILXVEMPFDKTKNQXKGFCFITF 601
+R+ FS FGTI ++ D+ + KGF F+ F
Sbjct: 359 LRDHFSSFGTITSAKVMVDE-NGRSKGFGFVCF 390
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 53.2 bits (122), Expect = 2e-07
Identities = 37/153 (24%), Positives = 73/153 (47%), Gaps = 25/153 (16%)
Frame = +2
Query: 218 KLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAP-------ES 376
+++VG +S+E + LR F +G I SIN+ DP TG + FAF+ ++ P ES
Sbjct: 103 RIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQES 162
Query: 377 IDKVMAAGEH-------------TINNKKVDP-----KKAKARHGKIFVGGLSSEISDDE 502
++ M G + N + P +K ++ +++V + ++S+ +
Sbjct: 163 MNGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFRVYVSSVHPDLSETD 222
Query: 503 IRNFFSEFGTILXVEMPFDKTKNQXKGFCFITF 601
+++ F FG I+ ++ T +GF ++ F
Sbjct: 223 LKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEF 255
Score = 29.5 bits (63), Expect = 2.1
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +2
Query: 218 KLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRS-RGFAFIVFKAPESIDKVMA 394
+++V + + ++ +L+ F A+GEI + P TGR RGF ++ F S + +A
Sbjct: 208 RVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAP-TGRGHRGFGYLEFNNLTSQSEAIA 266
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 53.2 bits (122), Expect = 2e-07
Identities = 37/153 (24%), Positives = 73/153 (47%), Gaps = 25/153 (16%)
Frame = +2
Query: 218 KLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAP-------ES 376
+++VG +S+E + LR F +G I SIN+ DP TG + FAF+ ++ P ES
Sbjct: 103 RIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQES 162
Query: 377 IDKVMAAGEH-------------TINNKKVDP-----KKAKARHGKIFVGGLSSEISDDE 502
++ M G + N + P +K ++ +++V + ++S+ +
Sbjct: 163 MNGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFRVYVSSVHPDLSETD 222
Query: 503 IRNFFSEFGTILXVEMPFDKTKNQXKGFCFITF 601
+++ F FG I+ ++ T +GF ++ F
Sbjct: 223 LKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEF 255
Score = 29.5 bits (63), Expect = 2.1
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +2
Query: 218 KLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRS-RGFAFIVFKAPESIDKVMA 394
+++V + + ++ +L+ F A+GEI + P TGR RGF ++ F S + +A
Sbjct: 208 RVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAP-TGRGHRGFGYLEFNNLTSQSEAIA 266
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 53.2 bits (122), Expect = 2e-07
Identities = 37/153 (24%), Positives = 73/153 (47%), Gaps = 25/153 (16%)
Frame = +2
Query: 218 KLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAP-------ES 376
+++VG +S+E + LR F +G I SIN+ DP TG + FAF+ ++ P ES
Sbjct: 103 RIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQES 162
Query: 377 IDKVMAAGEH-------------TINNKKVDP-----KKAKARHGKIFVGGLSSEISDDE 502
++ M G + N + P +K ++ +++V + ++S+ +
Sbjct: 163 MNGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFRVYVSSVHPDLSETD 222
Query: 503 IRNFFSEFGTILXVEMPFDKTKNQXKGFCFITF 601
+++ F FG I+ ++ T +GF ++ F
Sbjct: 223 LKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEF 255
Score = 29.5 bits (63), Expect = 2.1
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +2
Query: 218 KLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRS-RGFAFIVFKAPESIDKVMA 394
+++V + + ++ +L+ F A+GEI + P TGR RGF ++ F S + +A
Sbjct: 208 RVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAP-TGRGHRGFGYLEFNNLTSQSEAIA 266
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 52.8 bits (121), Expect = 2e-07
Identities = 29/105 (27%), Positives = 55/105 (52%)
Frame = +2
Query: 209 DDRKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESIDKV 388
D +++GGLS+ ++ ++ F YGE+ +IN+ D +TG+S+GFAF+ +K S +
Sbjct: 36 DSAWIYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQRS--TI 93
Query: 389 MAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSE 523
+A N + + + H + + E +DDE + + E
Sbjct: 94 LAV--DNFNGISLHKRMIRVDHVEEYKVPKYKEDADDETKRLWEE 136
Score = 41.1 bits (92), Expect = 7e-04
Identities = 15/47 (31%), Positives = 30/47 (63%)
Frame = +2
Query: 461 IFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQXKGFCFITF 601
I++GGLS +S+ ++ FS++G ++ + + DK + KGF F+ +
Sbjct: 40 IYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCY 86
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 52.0 bits (119), Expect = 3e-07
Identities = 41/152 (26%), Positives = 67/152 (44%), Gaps = 17/152 (11%)
Frame = +2
Query: 197 PGRDDDR-KLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVF---- 361
P +D D KLFVG + +K+LR F +G+I + D TG +G AF+ +
Sbjct: 22 PVKDPDAIKLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRD 81
Query: 362 ------------KAPESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEI 505
K +++ M +++ PK K K+F+G LS + S+DE+
Sbjct: 82 SAVRCQATLHDQKTLPGMNRAMQVKPADTDSRPASPKD-KMDDKKLFIGMLSKQQSEDEV 140
Query: 506 RNFFSEFGTILXVEMPFDKTKNQXKGFCFITF 601
R F+ FG + V + KG F+ +
Sbjct: 141 RALFATFGELDEVTV-LRGADGASKGCAFVKY 171
Score = 44.4 bits (100), Expect = 7e-05
Identities = 22/63 (34%), Positives = 36/63 (57%)
Frame = +2
Query: 176 DHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFI 355
D A + DD+KLF+G LS + ++ E+R F +GE+ + V + G S+G AF+
Sbjct: 111 DSRPASPKDKMDDKKLFIGMLSKQQSEDEVRALFATFGELDEVTVLRGAD-GASKGCAFV 169
Query: 356 VFK 364
+K
Sbjct: 170 KYK 172
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 52.0 bits (119), Expect = 3e-07
Identities = 41/152 (26%), Positives = 67/152 (44%), Gaps = 17/152 (11%)
Frame = +2
Query: 197 PGRDDDR-KLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVF---- 361
P +D D KLFVG + +K+LR F +G+I + D TG +G AF+ +
Sbjct: 22 PVKDPDAIKLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRD 81
Query: 362 ------------KAPESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEI 505
K +++ M +++ PK K K+F+G LS + S+DE+
Sbjct: 82 SAVRCQATLHDQKTLPGMNRAMQVKPADTDSRPASPKD-KMDDKKLFIGMLSKQQSEDEV 140
Query: 506 RNFFSEFGTILXVEMPFDKTKNQXKGFCFITF 601
R F+ FG + V + KG F+ +
Sbjct: 141 RALFATFGELDEVTV-LRGADGASKGCAFVKY 171
Score = 44.4 bits (100), Expect = 7e-05
Identities = 22/63 (34%), Positives = 36/63 (57%)
Frame = +2
Query: 176 DHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFI 355
D A + DD+KLF+G LS + ++ E+R F +GE+ + V + G S+G AF+
Sbjct: 111 DSRPASPKDKMDDKKLFIGMLSKQQSEDEVRALFATFGELDEVTVLRGAD-GASKGCAFV 169
Query: 356 VFK 364
+K
Sbjct: 170 KYK 172
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 51.6 bits (118), Expect = 5e-07
Identities = 29/77 (37%), Positives = 38/77 (49%)
Frame = +2
Query: 143 GNAENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDP 322
G GGG + + + L V LS TT+K+LRD FG +GEI ++ D
Sbjct: 52 GGGGGGGGGRGRNQQYDRENPQPSKCLGVFNLSSYTTEKDLRDVFGEFGEINKCDLVYDR 111
Query: 323 NTGRSRGFAFIVFKAPE 373
+G SRGF FI F E
Sbjct: 112 PSGNSRGFGFIYFNLIE 128
Score = 35.5 bits (78), Expect = 0.032
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +2
Query: 467 VGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQXKGFCFITF 601
V LSS ++ ++R+ F EFG I ++ +D+ +GF FI F
Sbjct: 80 VFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYF 124
>Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical
protein F11A10.7 protein.
Length = 394
Score = 51.6 bits (118), Expect = 5e-07
Identities = 45/164 (27%), Positives = 72/164 (43%), Gaps = 24/164 (14%)
Frame = +2
Query: 182 NSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIXSINVK---------------- 313
++A A ++ +FVG + +K +R F +G I S+ ++
Sbjct: 132 SNARASAAENALTVFVGNMPLTMNEKSVRRIFSDFGTISSVRMRNLLPANEKLTKRVTHL 191
Query: 314 TDPNTGRSRGFAFIV-FKAPESIDKVMAAG-----EHTINNKKVDPKKAK-ARHGKIFVG 472
T + F V F A ES++K + +H I KV KK + + IFVG
Sbjct: 192 TGKLNDKQSSLTFYVKFGAEESVEKALKYNGTKLDDHVIRVDKVGSKKKEFGKDMAIFVG 251
Query: 473 GLSSEISDDEIRNFFS-EFGTILXVEMPFDKTKNQXKGFCFITF 601
L EI++D + FFS + G + V + DK + KGF F+ F
Sbjct: 252 NLPFEITEDALITFFSAQIGPVEAVRIVRDKDTGKGKGFAFVNF 295
Score = 48.0 bits (109), Expect = 6e-06
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Frame = +2
Query: 212 DRKLFVGGLSWETTDKELRDHFGAY-GEIXSINVKTDPNTGRSRGFAFIVFKAPESIDKV 388
D +FVG L +E T+ L F A G + ++ + D +TG+ +GFAF+ FK S+
Sbjct: 245 DMAIFVGNLPFEITEDALITFFSAQIGPVEAVRIVRDKDTGKGKGFAFVNFKQDSSVS-- 302
Query: 389 MAAGEHTINNKKVDPKKAK 445
+A TI +K D + K
Sbjct: 303 LALSMETIKMEKRDLRITK 321
>Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical
protein F44G4.4a protein.
Length = 411
Score = 51.6 bits (118), Expect = 5e-07
Identities = 39/167 (23%), Positives = 77/167 (46%), Gaps = 12/167 (7%)
Frame = +2
Query: 134 QLNGNAENGGGDSQDHNSAEAPGRDDDRK---LFVGGLSWETTDKELRDHFGAYGEIXSI 304
++ + ++ D +D S + D + L V G+ ++TTD+ + +F G +
Sbjct: 143 KVGSSDDSDSDDGRDGRSGRKRAVERDSQPVDLIVLGVDFKTTDECFQKYFEDIGTVVFC 202
Query: 305 NVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH-------GKI 463
+K + G S+GF F+ + +KV+A +H I+ ++ D K R +I
Sbjct: 203 EIKRKSD-GNSKGFGFVRMSSVGEQNKVLAIPQHMIDGRRCDVKVPDGRDKQGRPSISRI 261
Query: 464 FVGGLSSEISDDEIRNFF-SEFGTILXVEMPFDK-TKNQXKGFCFIT 598
FVG L+ ++ + ++R F E + + + D +GF F+T
Sbjct: 262 FVGRLTDKVDEHQLRKVFGDEAKSYIETAVVTDVFIPKPFRGFAFVT 308
Score = 38.3 bits (85), Expect = 0.005
Identities = 25/86 (29%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Frame = +2
Query: 200 GRDDDRKLFVGGLSWETTDKELRDHFGAYGE-IXSINVKTDPNTGRS-RGFAFIVFKAPE 373
GR ++FVG L+ + + +LR FG + V TD + RGFAF+ + E
Sbjct: 254 GRPSISRIFVGRLTDKVDEHQLRKVFGDEAKSYIETAVVTDVFIPKPFRGFAFVTLSSAE 313
Query: 374 SIDKVMAAGEHTINNKKVDPKKAKAR 451
+ +++++ G T+N V A+ R
Sbjct: 314 AAERIVSKGSLTVNGLSVGLSIAQPR 339
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 50.0 bits (114), Expect = 1e-06
Identities = 32/133 (24%), Positives = 60/133 (45%), Gaps = 6/133 (4%)
Frame = +2
Query: 221 LFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVF-KAPESIDKVMAA 397
L + L T +E+R F + GEI S + D TG+S G+ F+ + + +++ V +
Sbjct: 44 LIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDALRAVSSF 103
Query: 398 GEHTINNKKVD-----PKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDK 562
+ NK + P + + ++V G+ ++ E+ + F FG I+ + D
Sbjct: 104 NGLRLQNKTIKVSYARPSNDQIKGSNLYVSGIPKSMTLHELESIFRPFGQIITSRILSDN 163
Query: 563 TKNQXKGFCFITF 601
KG F+ F
Sbjct: 164 VTGLSKGVGFVRF 176
Score = 35.5 bits (78), Expect = 0.032
Identities = 18/46 (39%), Positives = 29/46 (63%)
Frame = +2
Query: 461 IFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQXKGFCFIT 598
+FV LSS+ D + FS+FG I+ V++ D T+ Q KG+ F++
Sbjct: 376 LFVYNLSSDTDDTLLWQLFSQFGAIVNVKILRDLTQ-QCKGYAFVS 420
Score = 34.3 bits (75), Expect = 0.075
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +2
Query: 221 LFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESID 382
L+V G+ T EL F +G+I + + +D TG S+G F+ F + D
Sbjct: 130 LYVSGIPKSMTLHELESIFRPFGQIITSRILSDNVTGLSKGVGFVRFDKKDEAD 183
>U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 7 protein.
Length = 332
Score = 50.0 bits (114), Expect = 1e-06
Identities = 26/62 (41%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Frame = +2
Query: 182 NSAEAPGRDDD--RKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFI 355
N AE P +D R LFVG +++ET++ +LR F AYG+I + + D G+ RG+AFI
Sbjct: 91 NPAENPRASEDPYRTLFVGRINYETSESKLRREFEAYGKIKKLTMVHD-EAGKPRGYAFI 149
Query: 356 VF 361
+
Sbjct: 150 EY 151
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 50.0 bits (114), Expect = 1e-06
Identities = 35/152 (23%), Positives = 62/152 (40%), Gaps = 5/152 (3%)
Frame = +2
Query: 161 GGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSR 340
GG D +++VG + + + L F G+I + + DP +G SR
Sbjct: 182 GGPPPDWEGPATGPAGQGHEIYVGHIPTDVFEDTLVPLFEKSGKIWDLRLMMDPMSGASR 241
Query: 341 GFAFIVFKAPESIDKVMAAGE-HTINNKKVDPKKAKARHGKIFVGGLSSEISDDEI---- 505
G+AF+ + E + H I+ K + ++F+G + S DEI
Sbjct: 242 GYAFVTYCNKEDAAAAAKTYDGHEISTGKPLKVNVSIANTRLFIGNIPKTKSKDEILEEL 301
Query: 506 RNFFSEFGTILXVEMPFDKTKNQXKGFCFITF 601
+ ++ +P D K + +GFCF+ F
Sbjct: 302 KTHAEGVVDVIVYSVP-DNEKIKNRGFCFVDF 332
>AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3c protein.
Length = 435
Score = 49.2 bits (112), Expect = 2e-06
Identities = 35/153 (22%), Positives = 65/153 (42%), Gaps = 22/153 (14%)
Frame = +2
Query: 209 DDRKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESIDKV 388
D R L + ++ +T ++L + F A G + + + TD TGRS+G ++ F ES+
Sbjct: 23 DQRTLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESVPLG 82
Query: 389 MAAGEHTINNKKVDPKKAKARHGK----------------------IFVGGLSSEISDDE 502
+A + + ++ A + + V L +I +
Sbjct: 83 LALNGQRLMGAPLQIQRTCAERNRAANSSVASTLGFVAPGNKGPTHVLVENLHPKIDEKM 142
Query: 503 IRNFFSEFGTILXVEMPFDKTKNQXKGFCFITF 601
IR+ F FG I +++ D + + +GF ITF
Sbjct: 143 IRDIFESFGRIEKIDLEVDSNR-ENRGFATITF 174
Score = 38.7 bits (86), Expect = 0.003
Identities = 21/64 (32%), Positives = 33/64 (51%)
Frame = +2
Query: 194 APGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPE 373
APG + V L + +K +RD F ++G I I+++ D N +RGFA I F+ +
Sbjct: 120 APGNKGPTHVLVENLHPKIDEKMIRDIFESFGRIEKIDLEVDSNR-ENRGFATITFRNAD 178
Query: 374 SIDK 385
K
Sbjct: 179 DAQK 182
Score = 28.3 bits (60), Expect = 4.9
Identities = 12/62 (19%), Positives = 27/62 (43%)
Frame = +2
Query: 416 NKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQXKGFCFI 595
N K++ + + + ++ + ++ FFS G + V + D + KG C++
Sbjct: 12 NAKLELTAEERDQRTLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYV 71
Query: 596 TF 601
F
Sbjct: 72 EF 73
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 49.2 bits (112), Expect = 2e-06
Identities = 35/153 (22%), Positives = 65/153 (42%), Gaps = 22/153 (14%)
Frame = +2
Query: 209 DDRKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESIDKV 388
D R L + ++ +T ++L + F A G + + + TD TGRS+G ++ F ES+
Sbjct: 168 DQRTLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESVPLG 227
Query: 389 MAAGEHTINNKKVDPKKAKARHGK----------------------IFVGGLSSEISDDE 502
+A + + ++ A + + V L +I +
Sbjct: 228 LALNGQRLMGAPLQIQRTCAERNRAANSSVASTLGFVAPGNKGPTHVLVENLHPKIDEKM 287
Query: 503 IRNFFSEFGTILXVEMPFDKTKNQXKGFCFITF 601
IR+ F FG I +++ D + + +GF ITF
Sbjct: 288 IRDIFESFGRIEKIDLEVDSNR-ENRGFATITF 319
Score = 38.7 bits (86), Expect = 0.003
Identities = 21/64 (32%), Positives = 33/64 (51%)
Frame = +2
Query: 194 APGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPE 373
APG + V L + +K +RD F ++G I I+++ D N +RGFA I F+ +
Sbjct: 265 APGNKGPTHVLVENLHPKIDEKMIRDIFESFGRIEKIDLEVDSNR-ENRGFATITFRNAD 323
Query: 374 SIDK 385
K
Sbjct: 324 DAQK 327
Score = 28.3 bits (60), Expect = 4.9
Identities = 12/62 (19%), Positives = 27/62 (43%)
Frame = +2
Query: 416 NKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQXKGFCFI 595
N K++ + + + ++ + ++ FFS G + V + D + KG C++
Sbjct: 157 NAKLELTAEERDQRTLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYV 216
Query: 596 TF 601
F
Sbjct: 217 EF 218
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 48.8 bits (111), Expect = 3e-06
Identities = 21/57 (36%), Positives = 35/57 (61%)
Frame = +2
Query: 221 LFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESIDKVM 391
++VG ++TT++EL + F + G+I ++ + D TGR RGFAFI F S + +
Sbjct: 7 VYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAV 63
Score = 38.7 bits (86), Expect = 0.003
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +2
Query: 461 IFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQXKGFCFITF 601
++VG + +++E+ NFFS G I V + D+ + +GF FI F
Sbjct: 7 VYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEF 53
>AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 48.0 bits (109), Expect = 6e-06
Identities = 47/162 (29%), Positives = 72/162 (44%), Gaps = 34/162 (20%)
Frame = +2
Query: 218 KLFVGGLSWETTDKELRDHFGAYGEIX-SINVKTDPNT-GRS-----RGFAFIVFKAPES 376
K+FVGG+S K + FG +G + VK PN+ G+S + F+V+ +S
Sbjct: 206 KVFVGGISHMMNRKIINKFFGQFGTVFVDWPVKQKPNSRGKSIAIGSYSYLFLVYSDEQS 265
Query: 377 IDKVMAAGEHTINNK------------KVDPK--------KAKARHGKI-------FVGG 475
+ K+M+A N ++ P KARH +I F+GG
Sbjct: 266 VIKLMSACHRNSQNDFFVSVPGFRDMIQIRPWFIYNGFYILEKARHNRIIDIHRTVFLGG 325
Query: 476 LSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQXKGFCFITF 601
L ++ +EI FSEFG +L V + D+ KG +TF
Sbjct: 326 LPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTF 367
Score = 39.5 bits (88), Expect = 0.002
Identities = 24/100 (24%), Positives = 43/100 (43%)
Frame = +2
Query: 272 HFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 451
HFG++ + + N + R K+ + + A HT+ + +
Sbjct: 144 HFGSFDSMSAYNFHNNNQQQRREAHVSRDGKSFDQGNIYTAEDVHTVVKNHRNENNQRVV 203
Query: 452 HGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKN 571
K+FVGG+S ++ I FF +FGT+ V+ P + N
Sbjct: 204 SNKVFVGGISHMMNRKIINKFFGQFGTVF-VDWPVKQKPN 242
>AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 48.0 bits (109), Expect = 6e-06
Identities = 47/162 (29%), Positives = 72/162 (44%), Gaps = 34/162 (20%)
Frame = +2
Query: 218 KLFVGGLSWETTDKELRDHFGAYGEIX-SINVKTDPNT-GRS-----RGFAFIVFKAPES 376
K+FVGG+S K + FG +G + VK PN+ G+S + F+V+ +S
Sbjct: 206 KVFVGGISHMMNRKIINKFFGQFGTVFVDWPVKQKPNSRGKSIAIGSYSYLFLVYSDEQS 265
Query: 377 IDKVMAAGEHTINNK------------KVDPK--------KAKARHGKI-------FVGG 475
+ K+M+A N ++ P KARH +I F+GG
Sbjct: 266 VIKLMSACHRNSQNDFFVSVPGFRDMIQIRPWFIYNGFYILEKARHNRIIDIHRTVFLGG 325
Query: 476 LSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQXKGFCFITF 601
L ++ +EI FSEFG +L V + D+ KG +TF
Sbjct: 326 LPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTF 367
Score = 39.5 bits (88), Expect = 0.002
Identities = 24/100 (24%), Positives = 43/100 (43%)
Frame = +2
Query: 272 HFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 451
HFG++ + + N + R K+ + + A HT+ + +
Sbjct: 144 HFGSFDSMSAYNFHNNNQQQRREAHVSRDGKSFDQGNIYTAEDVHTVVKNHRNENNQRVV 203
Query: 452 HGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKN 571
K+FVGG+S ++ I FF +FGT+ V+ P + N
Sbjct: 204 SNKVFVGGISHMMNRKIINKFFGQFGTVF-VDWPVKQKPN 242
>AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization of
germline protein1, isoform b protein.
Length = 619
Score = 48.0 bits (109), Expect = 6e-06
Identities = 47/162 (29%), Positives = 72/162 (44%), Gaps = 34/162 (20%)
Frame = +2
Query: 218 KLFVGGLSWETTDKELRDHFGAYGEIX-SINVKTDPNT-GRS-----RGFAFIVFKAPES 376
K+FVGG+S K + FG +G + VK PN+ G+S + F+V+ +S
Sbjct: 206 KVFVGGISHMMNRKIINKFFGQFGTVFVDWPVKQKPNSRGKSIAIGSYSYLFLVYSDEQS 265
Query: 377 IDKVMAAGEHTINNK------------KVDPK--------KAKARHGKI-------FVGG 475
+ K+M+A N ++ P KARH +I F+GG
Sbjct: 266 VIKLMSACHRNSQNDFFVSVPGFRDMIQIRPWFIYNGFYILEKARHNRIIDIHRTVFLGG 325
Query: 476 LSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQXKGFCFITF 601
L ++ +EI FSEFG +L V + D+ KG +TF
Sbjct: 326 LPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTF 367
Score = 39.5 bits (88), Expect = 0.002
Identities = 24/100 (24%), Positives = 43/100 (43%)
Frame = +2
Query: 272 HFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 451
HFG++ + + N + R K+ + + A HT+ + +
Sbjct: 144 HFGSFDSMSAYNFHNNNQQQRREAHVSRDGKSFDQGNIYTAEDVHTVVKNHRNENNQRVV 203
Query: 452 HGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKN 571
K+FVGG+S ++ I FF +FGT+ V+ P + N
Sbjct: 204 SNKVFVGGISHMMNRKIINKFFGQFGTVF-VDWPVKQKPN 242
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 47.6 bits (108), Expect = 8e-06
Identities = 19/47 (40%), Positives = 32/47 (68%)
Frame = +2
Query: 461 IFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQXKGFCFITF 601
+FVG +S ++S+D IR+ FS+ G +L ++M D+ + KG+ FI F
Sbjct: 20 VFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEF 66
Score = 42.3 bits (95), Expect = 3e-04
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +2
Query: 200 GRD-DDRKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVF 361
G D R +FVG +S++ ++ +R F G + SI + D TG+ +G+ FI F
Sbjct: 12 GNDRSQRSVFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEF 66
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 46.4 bits (105), Expect = 2e-05
Identities = 17/47 (36%), Positives = 32/47 (68%)
Frame = +2
Query: 221 LFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVF 361
++VG + ++ T++E+ ++F A G + ++ + D TGR RGFAF+ F
Sbjct: 8 VYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEF 54
Score = 36.7 bits (81), Expect = 0.014
Identities = 13/47 (27%), Positives = 29/47 (61%)
Frame = +2
Query: 461 IFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQXKGFCFITF 601
++VG + + +++EI N+F+ G + V + +D+ + +GF F+ F
Sbjct: 8 VYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEF 54
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 46.4 bits (105), Expect = 2e-05
Identities = 38/151 (25%), Positives = 64/151 (42%), Gaps = 15/151 (9%)
Frame = +2
Query: 194 APGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPE 373
A G +D R LFV L TD+ L F G + + + G + +AF+ F
Sbjct: 33 ASGSEDPRTLFVANLDPAITDEFLATLFNQIGAVMKAKIIFE---GLNDPYAFVEFSDHN 89
Query: 374 SIDKVMAA--GEHTINNKK-----VDP--------KKAKARHGKIFVGGLSSEISDDEIR 508
+ + G + + +P K +RH +FVG L SEI ++R
Sbjct: 90 QATLALQSHNGRELLEKEMHVTWAFEPREPGENRSKPETSRHFHVFVGDLCSEIDSTKLR 149
Query: 509 NFFSEFGTILXVEMPFDKTKNQXKGFCFITF 601
F +FG + ++ D N+ KG+ F+++
Sbjct: 150 EAFVKFGEVSEAKIIRDNNTNKGKGYGFVSY 180
Score = 39.1 bits (87), Expect = 0.003
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +2
Query: 221 LFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESIDKVM 391
+FVG L E +LR+ F +GE+ + D NT + +G+ F+ + E ++ +
Sbjct: 134 VFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGFVSYPRREDAERAI 190
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = +2
Query: 404 HTINNKKVDP--KKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTI 535
H + K D +A A + ++VG +++ + +DEIR F FG I
Sbjct: 237 HNQSEKTYDEIFNQAAADNTSVYVGNIAN-LGEDEIRRAFDRFGPI 281
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 46.4 bits (105), Expect = 2e-05
Identities = 25/66 (37%), Positives = 34/66 (51%)
Frame = +2
Query: 176 DHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFI 355
+ + AE + L+V L D L+ F +YG I S V TD N GRS+GF F+
Sbjct: 244 EQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDEN-GRSKGFGFV 302
Query: 356 VFKAPE 373
F+ PE
Sbjct: 303 CFEKPE 308
Score = 37.1 bits (82), Expect = 0.011
Identities = 19/57 (33%), Positives = 30/57 (52%)
Frame = +2
Query: 221 LFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESIDKVM 391
L+VG L + + L + F A G + SI V D T S G+A++ F+ P ++ M
Sbjct: 34 LYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAM 90
Score = 34.3 bits (75), Expect = 0.075
Identities = 36/135 (26%), Positives = 55/135 (40%), Gaps = 26/135 (19%)
Frame = +2
Query: 275 FGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESID-KVMAAGEHTIN------------ 415
F +G I S V T G+S+GF F+ F PE + V A + TI
Sbjct: 173 FAKFGNITSCEVMTVE--GKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHVCRAQ 230
Query: 416 ---------NKKVDPKKA----KARHGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPF 556
KK + KA K + ++V L + DD ++ F +G I ++
Sbjct: 231 KKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMT 290
Query: 557 DKTKNQXKGFCFITF 601
D+ + KGF F+ F
Sbjct: 291 DE-NGRSKGFGFVCF 304
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 46.4 bits (105), Expect = 2e-05
Identities = 25/66 (37%), Positives = 34/66 (51%)
Frame = +2
Query: 176 DHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFI 355
+ + AE + L+V L D L+ F +YG I S V TD N GRS+GF F+
Sbjct: 241 EQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDEN-GRSKGFGFV 299
Query: 356 VFKAPE 373
F+ PE
Sbjct: 300 CFEKPE 305
Score = 34.3 bits (75), Expect = 0.075
Identities = 36/135 (26%), Positives = 55/135 (40%), Gaps = 26/135 (19%)
Frame = +2
Query: 275 FGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESID-KVMAAGEHTIN------------ 415
F +G I S V T G+S+GF F+ F PE + V A + TI
Sbjct: 170 FAKFGNITSCEVMTVE--GKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHVCRAQ 227
Query: 416 ---------NKKVDPKKA----KARHGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPF 556
KK + KA K + ++V L + DD ++ F +G I ++
Sbjct: 228 KKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMT 287
Query: 557 DKTKNQXKGFCFITF 601
D+ + KGF F+ F
Sbjct: 288 DE-NGRSKGFGFVCF 301
Score = 33.9 bits (74), Expect = 0.099
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = +2
Query: 428 DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQXKGFCFITF 601
DP ++ G IF+ L I + I + FS FG IL ++ D+ KG+ F+ F
Sbjct: 48 DPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDE-DGFSKGYGFVHF 104
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 46.0 bits (104), Expect = 2e-05
Identities = 38/151 (25%), Positives = 73/151 (48%), Gaps = 27/151 (17%)
Frame = +2
Query: 179 HNSAEAPG--RDDDRK---LFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRG 343
H+++E P R D K +FVG LS + +++ L+ F +GE+ V D T +S+G
Sbjct: 118 HSASEPPMEMRIDTSKHFHVFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKG 177
Query: 344 FAFIVFKAPESIDKVMAA------GEHTI--------NNKKVDPK--------KAKARHG 457
+ F+ F ++ + +A G+ + N+++ K KA +
Sbjct: 178 YGFVSFPNKQNAENAIAGMNGKWIGKRAVRTNWAARKNSEENRDKLTFEQVFNSTKADNT 237
Query: 458 KIFVGGLSSEISDDEIRNFFSEFGTILXVEM 550
++VG +S + +D ++R+ FS +G I V +
Sbjct: 238 SVYVGNISQQTTDADLRDLFSTYGDIAEVRI 268
Score = 41.5 bits (93), Expect = 5e-04
Identities = 16/66 (24%), Positives = 40/66 (60%)
Frame = +2
Query: 404 HTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQXKG 583
H+ + ++ + ++H +FVG LS ++S++ +++ F++FG + ++ D + KG
Sbjct: 118 HSASEPPMEMRIDTSKHFHVFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKG 177
Query: 584 FCFITF 601
+ F++F
Sbjct: 178 YGFVSF 183
Score = 38.7 bits (86), Expect = 0.003
Identities = 18/61 (29%), Positives = 35/61 (57%)
Frame = +2
Query: 209 DDRKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESIDKV 388
D+ ++VG +S +TTD +LRD F YG+I + + +++ +AF+ ++ E K
Sbjct: 235 DNTSVYVGNISQQTTDADLRDLFSTYGDIAEVRI------FKTQRYAFVRYEKKECATKA 288
Query: 389 M 391
+
Sbjct: 289 I 289
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 46.0 bits (104), Expect = 2e-05
Identities = 36/136 (26%), Positives = 63/136 (46%), Gaps = 26/136 (19%)
Frame = +2
Query: 221 LFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESIDKVMA-- 394
+FVG LS E +++LR+ F +G++ V D NT +S+G+ F+ + E ++ +
Sbjct: 24 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 83
Query: 395 ----AGEHTI------------------NNKKVDP--KKAKARHGKIFVGGLSSEISDDE 502
G TI N K D + + ++VG ++S +++DE
Sbjct: 84 NGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIAS-LTEDE 142
Query: 503 IRNFFSEFGTILXVEM 550
IR F+ FG I V +
Sbjct: 143 IRQGFASFGRITEVRI 158
Score = 41.9 bits (94), Expect = 4e-04
Identities = 17/51 (33%), Positives = 30/51 (58%)
Frame = +2
Query: 449 RHGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQXKGFCFITF 601
RH +FVG LSSE+ + ++R F FG + ++ D + KG+ F+++
Sbjct: 20 RHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSY 70
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 46.0 bits (104), Expect = 2e-05
Identities = 36/136 (26%), Positives = 63/136 (46%), Gaps = 26/136 (19%)
Frame = +2
Query: 221 LFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESIDKVMA-- 394
+FVG LS E +++LR+ F +G++ V D NT +S+G+ F+ + E ++ +
Sbjct: 34 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 93
Query: 395 ----AGEHTI------------------NNKKVDP--KKAKARHGKIFVGGLSSEISDDE 502
G TI N K D + + ++VG ++S +++DE
Sbjct: 94 NGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIAS-LTEDE 152
Query: 503 IRNFFSEFGTILXVEM 550
IR F+ FG I V +
Sbjct: 153 IRQGFASFGRITEVRI 168
Score = 41.9 bits (94), Expect = 4e-04
Identities = 17/51 (33%), Positives = 30/51 (58%)
Frame = +2
Query: 449 RHGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQXKGFCFITF 601
RH +FVG LSSE+ + ++R F FG + ++ D + KG+ F+++
Sbjct: 30 RHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSY 80
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 46.0 bits (104), Expect = 2e-05
Identities = 36/136 (26%), Positives = 63/136 (46%), Gaps = 26/136 (19%)
Frame = +2
Query: 221 LFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESIDKVMA-- 394
+FVG LS E +++LR+ F +G++ V D NT +S+G+ F+ + E ++ +
Sbjct: 105 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 164
Query: 395 ----AGEHTI------------------NNKKVDP--KKAKARHGKIFVGGLSSEISDDE 502
G TI N K D + + ++VG ++S +++DE
Sbjct: 165 NGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIAS-LTEDE 223
Query: 503 IRNFFSEFGTILXVEM 550
IR F+ FG I V +
Sbjct: 224 IRQGFASFGRITEVRI 239
Score = 41.9 bits (94), Expect = 4e-04
Identities = 17/51 (33%), Positives = 30/51 (58%)
Frame = +2
Query: 449 RHGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQXKGFCFITF 601
RH +FVG LSSE+ + ++R F FG + ++ D + KG+ F+++
Sbjct: 101 RHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSY 151
Score = 31.1 bits (67), Expect = 0.70
Identities = 11/36 (30%), Positives = 23/36 (63%)
Frame = +2
Query: 461 IFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTK 568
++VG L S +++D I F++ G++ ++ FD+ K
Sbjct: 48 LYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDEMK 83
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 44.8 bits (101), Expect = 5e-05
Identities = 17/47 (36%), Positives = 30/47 (63%)
Frame = +2
Query: 221 LFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVF 361
++VG ++TT+ +L ++F G + ++ + D TGR RGFAF+ F
Sbjct: 6 VYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEF 52
Score = 37.9 bits (84), Expect = 0.006
Identities = 13/47 (27%), Positives = 28/47 (59%)
Frame = +2
Query: 461 IFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQXKGFCFITF 601
++VG + ++D++ N+FS+ G + V + D+ + +GF F+ F
Sbjct: 6 VYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEF 52
>Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical
protein F22B5.2 protein.
Length = 256
Score = 44.8 bits (101), Expect = 5e-05
Identities = 22/64 (34%), Positives = 33/64 (51%)
Frame = +2
Query: 203 RDDDRKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESID 382
R D+ V L E + ELRD FG G + I + D TG +GFAF+ F++ +
Sbjct: 172 RSDENTCRVTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRDDAA 231
Query: 383 KVMA 394
+ +A
Sbjct: 232 RAIA 235
Score = 40.3 bits (90), Expect = 0.001
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +2
Query: 467 VGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQXKGFCFITF 601
V L E+++DE+R+ F + G ++ + + DK KGF F+TF
Sbjct: 180 VTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTF 224
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 44.8 bits (101), Expect = 5e-05
Identities = 22/60 (36%), Positives = 35/60 (58%)
Frame = +2
Query: 215 RKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 394
R L+VGG + + T+K L F +G++ +I++ D +G+ RGF F+ F E D MA
Sbjct: 11 RTLYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFDMAE--DAAMA 68
Score = 36.7 bits (81), Expect = 0.014
Identities = 13/51 (25%), Positives = 28/51 (54%)
Frame = +2
Query: 449 RHGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQXKGFCFITF 601
R ++VGG + ++++ + F FG ++ + +P D + +GF F+ F
Sbjct: 9 RKRTLYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEF 59
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 44.0 bits (99), Expect = 9e-05
Identities = 24/97 (24%), Positives = 51/97 (52%)
Frame = +2
Query: 218 KLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 397
++FVGG TT+ ELR+HF + + + + + G+S+G+ FI F+ + +++
Sbjct: 67 RIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLD-GQSKGYGFITFETEDQAEEI--- 122
Query: 398 GEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIR 508
+K+ PK+ + R K+ +G +I+ + +
Sbjct: 123 -------RKLTPKQLEFRSRKLNLGPAIRKINSNSFQ 152
Score = 36.7 bits (81), Expect = 0.014
Identities = 18/48 (37%), Positives = 27/48 (56%)
Frame = +2
Query: 458 KIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQXKGFCFITF 601
+IFVGG + ++ E+R F +F + V+M Q KG+ FITF
Sbjct: 67 RIFVGGFPTSTTETELREHFEKFFAVKDVKM-VKSLDGQSKGYGFITF 113
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 44.0 bits (99), Expect = 9e-05
Identities = 24/97 (24%), Positives = 51/97 (52%)
Frame = +2
Query: 218 KLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 397
++FVGG TT+ ELR+HF + + + + + G+S+G+ FI F+ + +++
Sbjct: 68 RIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLD-GQSKGYGFITFETEDQAEEI--- 123
Query: 398 GEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIR 508
+K+ PK+ + R K+ +G +I+ + +
Sbjct: 124 -------RKLTPKQLEFRSRKLNLGPAIRKINSNSFQ 153
Score = 36.7 bits (81), Expect = 0.014
Identities = 18/48 (37%), Positives = 27/48 (56%)
Frame = +2
Query: 458 KIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQXKGFCFITF 601
+IFVGG + ++ E+R F +F + V+M Q KG+ FITF
Sbjct: 68 RIFVGGFPTSTTETELREHFEKFFAVKDVKM-VKSLDGQSKGYGFITF 114
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 43.6 bits (98), Expect = 1e-04
Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Frame = +2
Query: 200 GRDDDRKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFK-APES 376
G +D+K++VG L + +KE+ D F YG I +++K +GR FAF+ F+ ++
Sbjct: 4 GGSEDQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDIK----SGRGPAFAFVEFEDHRDA 59
Query: 377 IDKVMAAGEHTINNKKV 427
D V A + + +++
Sbjct: 60 EDAVRARDGYEFDGRRI 76
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 43.6 bits (98), Expect = 1e-04
Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Frame = +2
Query: 200 GRDDDRKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFK-APES 376
G +D+K++VG L + +KE+ D F YG I +++K +GR FAF+ F+ ++
Sbjct: 4 GGSEDQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDIK----SGRGPAFAFVEFEDHRDA 59
Query: 377 IDKVMAAGEHTINNKKV 427
D V A + + +++
Sbjct: 60 EDAVRARDGYEFDGRRI 76
>U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform b protein.
Length = 126
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/71 (32%), Positives = 38/71 (53%)
Frame = +2
Query: 149 AENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNT 328
+ GGGD + AP + L + LS++TT +LR F YG+I +++ D +
Sbjct: 2 SRGGGGDRR-----AAPDINGLTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYS 56
Query: 329 GRSRGFAFIVF 361
+S+GF F+ F
Sbjct: 57 RQSKGFGFVRF 67
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/71 (32%), Positives = 38/71 (53%)
Frame = +2
Query: 149 AENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNT 328
+ GGGD + AP + L + LS++TT +LR F YG+I +++ D +
Sbjct: 2 SRGGGGDRR-----AAPDINGLTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYS 56
Query: 329 GRSRGFAFIVF 361
+S+GF F+ F
Sbjct: 57 RQSKGFGFVRF 67
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 42.7 bits (96), Expect = 2e-04
Identities = 19/53 (35%), Positives = 30/53 (56%)
Frame = +2
Query: 218 KLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPES 376
+LF+ L + T + +L+ F YGE+ + V D TG +GFA + F PE+
Sbjct: 280 RLFLRNLPYATKEDDLQFLFKKYGEVSEVQVVIDKKTGACKGFAIVEFVFPEA 332
Score = 39.5 bits (88), Expect = 0.002
Identities = 23/69 (33%), Positives = 33/69 (47%)
Frame = +2
Query: 218 KLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 397
+L V L T+++LR F YG+I ++K G+ RGFAF+ F S +A
Sbjct: 4 RLIVKNLPSTCTEQQLRKFFEKYGQISDASLKYTKE-GKFRGFAFVGFLDEGSASNALAK 62
Query: 398 GEHTINNKK 424
T N K
Sbjct: 63 SNQTFFNSK 71
>U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical
protein EEED8.4 protein.
Length = 191
Score = 42.7 bits (96), Expect = 2e-04
Identities = 17/61 (27%), Positives = 33/61 (54%)
Frame = +2
Query: 209 DDRKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESIDKV 388
D + +F+G + + +T +E+ +HF G+I + D T + + FA+I F SI+
Sbjct: 53 DAKSVFIGNVDFNSTIEEIEEHFKGCGQIVKTTIPKDKFTKKQKNFAYIEFDDSSSIENA 112
Query: 389 M 391
+
Sbjct: 113 L 113
>AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization of
germline protein1, isoform a protein.
Length = 405
Score = 42.7 bits (96), Expect = 2e-04
Identities = 19/50 (38%), Positives = 28/50 (56%)
Frame = +2
Query: 452 HGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQXKGFCFITF 601
H +F+GGL ++ +EI FSEFG +L V + D+ KG +TF
Sbjct: 104 HRTVFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTF 153
>U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle
orientation defective protein4 protein.
Length = 351
Score = 42.3 bits (95), Expect = 3e-04
Identities = 23/90 (25%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Frame = +2
Query: 197 PGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPES 376
P D +++V + + +++L F AYG + S+ + T N S+GF F+ + ES
Sbjct: 45 PASFTDNRIYVSNIPFSFREQDLAAMFFAYGRVLSVEIVT--NDRGSKGFGFVTLDSIES 102
Query: 377 IDKVMAA-GEHTINNKKVDPKKAKARHGKI 463
+K AA E + + ++ ++A K+
Sbjct: 103 CEKARAALHESHVQGRIIEVRRATPTRRKL 132
>AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein.
Length = 351
Score = 42.3 bits (95), Expect = 3e-04
Identities = 23/90 (25%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Frame = +2
Query: 197 PGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPES 376
P D +++V + + +++L F AYG + S+ + T N S+GF F+ + ES
Sbjct: 45 PASFTDNRIYVSNIPFSFREQDLAAMFFAYGRVLSVEIVT--NDRGSKGFGFVTLDSIES 102
Query: 377 IDKVMAA-GEHTINNKKVDPKKAKARHGKI 463
+K AA E + + ++ ++A K+
Sbjct: 103 CEKARAALHESHVQGRIIEVRRATPTRRKL 132
>U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical
protein EEED8.12 protein.
Length = 197
Score = 41.1 bits (92), Expect = 7e-04
Identities = 17/61 (27%), Positives = 32/61 (52%)
Frame = +2
Query: 209 DDRKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESIDKV 388
D + +F+G + + +T +E+ +HF G I + D T + + FA+I F SI+
Sbjct: 59 DAKSVFIGNVDFNSTIEEVEEHFKGCGHIVRTTIPKDKFTKKQKNFAYIEFDDSSSIENA 118
Query: 389 M 391
+
Sbjct: 119 L 119
>Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical
protein R07E5.14 protein.
Length = 142
Score = 40.7 bits (91), Expect = 9e-04
Identities = 24/92 (26%), Positives = 46/92 (50%), Gaps = 4/92 (4%)
Frame = +2
Query: 167 DSQDHNSAEAPGRDDDRKL-FVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRG 343
D + ++ AP R + + FV + E T+ ++ D F YG+I +I++ D TG +G
Sbjct: 38 DEESSATSGAPQRSVEGWIVFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKG 97
Query: 344 FAFIVFKAPESIDKVMAAGEHTI---NNKKVD 430
+A + ++ + ++ + T N KVD
Sbjct: 98 YALVEYETQKEANEAIDQSNDTDLLGQNVKVD 129
Score = 34.7 bits (76), Expect = 0.057
Identities = 12/47 (25%), Positives = 26/47 (55%)
Frame = +2
Query: 461 IFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQXKGFCFITF 601
+FV + E ++D++ + FSE+G I + + D+ KG+ + +
Sbjct: 57 VFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKGYALVEY 103
>U23484-7|ABB88232.1| 738|Caenorhabditis elegans Hypothetical
protein EEED8.10a protein.
Length = 738
Score = 38.7 bits (86), Expect = 0.003
Identities = 39/131 (29%), Positives = 55/131 (41%), Gaps = 11/131 (8%)
Frame = +2
Query: 140 NGNAENGGG-DSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIXSI---- 304
+G+A +GG D D + A DDRK+ V +S + T +L+ F YG+I S
Sbjct: 86 DGDAFDGGETDDFDASIAFQHTSRDDRKIVVSNISAKVTQSQLQSFFSQYGKITSCILPR 145
Query: 305 -NVKTD-----PNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGKIF 466
KT P R+ G A I FK E D+ A + K D + +
Sbjct: 146 EEKKTSVFGTLPKHSRNCGTATITFKKSEHADRAKNANPEEL--KFYDQVMVVSAYVSKK 203
Query: 467 VGGLSSEISDD 499
GG +SDD
Sbjct: 204 RGGKGLVLSDD 214
>AF003141-14|AAM48549.1| 362|Caenorhabditis elegans Hypothetical
protein W02D3.11b protein.
Length = 362
Score = 38.7 bits (86), Expect = 0.003
Identities = 21/66 (31%), Positives = 34/66 (51%)
Frame = +2
Query: 233 GLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTI 412
GL WE T++ELRD FG G I S+ + GR+ G A +VF E + + +
Sbjct: 11 GLPWEATEQELRDFFGNNG-IESLEIPR--RNGRTSGDAKVVFTNEEDYNNALKKDREHL 67
Query: 413 NNKKVD 430
++ ++
Sbjct: 68 GSRYIE 73
>AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical
protein W02D3.11a protein.
Length = 549
Score = 38.7 bits (86), Expect = 0.003
Identities = 21/66 (31%), Positives = 34/66 (51%)
Frame = +2
Query: 233 GLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTI 412
GL WE T++ELRD FG G I S+ + GR+ G A +VF E + + +
Sbjct: 11 GLPWEATEQELRDFFGNNG-IESLEIPR--RNGRTSGDAKVVFTNEEDYNNALKKDREHL 67
Query: 413 NNKKVD 430
++ ++
Sbjct: 68 GSRYIE 73
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 38.3 bits (85), Expect = 0.005
Identities = 17/63 (26%), Positives = 36/63 (57%)
Frame = +2
Query: 206 DDDRKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESIDK 385
D K+F+GGL T+ ++++ ++G + + ++ D + G S+G+AF + P D+
Sbjct: 288 DSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLDPTLTDQ 346
Query: 386 VMA 394
+A
Sbjct: 347 AIA 349
Score = 34.7 bits (76), Expect = 0.057
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +2
Query: 458 KIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQXKGFCFITF 601
KIF+GGL + +++D+++ FG + + D N KG+ F +
Sbjct: 292 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNS-KGYAFAEY 338
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 38.3 bits (85), Expect = 0.005
Identities = 17/63 (26%), Positives = 36/63 (57%)
Frame = +2
Query: 206 DDDRKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESIDK 385
D K+F+GGL T+ ++++ ++G + + ++ D + G S+G+AF + P D+
Sbjct: 288 DSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLDPTLTDQ 346
Query: 386 VMA 394
+A
Sbjct: 347 AIA 349
Score = 34.7 bits (76), Expect = 0.057
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +2
Query: 458 KIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQXKGFCFITF 601
KIF+GGL + +++D+++ FG + + D N KG+ F +
Sbjct: 292 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNS-KGYAFAEY 338
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 38.3 bits (85), Expect = 0.005
Identities = 17/63 (26%), Positives = 36/63 (57%)
Frame = +2
Query: 206 DDDRKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESIDK 385
D K+F+GGL T+ ++++ ++G + + ++ D + G S+G+AF + P D+
Sbjct: 263 DSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLDPTLTDQ 321
Query: 386 VMA 394
+A
Sbjct: 322 AIA 324
Score = 34.7 bits (76), Expect = 0.057
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +2
Query: 458 KIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQXKGFCFITF 601
KIF+GGL + +++D+++ FG + + D N KG+ F +
Sbjct: 267 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNS-KGYAFAEY 313
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 38.3 bits (85), Expect = 0.005
Identities = 17/63 (26%), Positives = 36/63 (57%)
Frame = +2
Query: 206 DDDRKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESIDK 385
D K+F+GGL T+ ++++ ++G + + ++ D + G S+G+AF + P D+
Sbjct: 266 DSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLDPTLTDQ 324
Query: 386 VMA 394
+A
Sbjct: 325 AIA 327
Score = 34.7 bits (76), Expect = 0.057
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +2
Query: 458 KIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQXKGFCFITF 601
KIF+GGL + +++D+++ FG + + D N KG+ F +
Sbjct: 270 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNS-KGYAFAEY 316
>AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya
binding family protein 3 protein.
Length = 751
Score = 37.1 bits (82), Expect = 0.011
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = +2
Query: 215 RKLFVGGLSWETTDKELRDHFGAYG 289
RK+FVGG+ W+ T+ L+D FG +G
Sbjct: 295 RKIFVGGVPWDITEAALKDSFGEFG 319
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +2
Query: 458 KIFVGGLSSEISDDEIRNFFSEFGTILXVEMP 553
KIFVGG+ +I++ +++ F EFG+ VE P
Sbjct: 296 KIFVGGVPWDITEAALKDSFGEFGS-CAVEWP 326
>Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical
protein R10E4.2b protein.
Length = 409
Score = 36.7 bits (81), Expect = 0.014
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +2
Query: 461 IFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQXKGFCFITF 601
+++ GL +DD +R S++G I + DK N KG+ F+ F
Sbjct: 109 LYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDF 155
>Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical
protein R10E4.2a protein.
Length = 357
Score = 36.7 bits (81), Expect = 0.014
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +2
Query: 461 IFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQXKGFCFITF 601
+++ GL +DD +R S++G I + DK N KG+ F+ F
Sbjct: 83 LYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDF 129
>AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical
protein C50D2.5 protein.
Length = 138
Score = 36.7 bits (81), Expect = 0.014
Identities = 22/65 (33%), Positives = 35/65 (53%)
Frame = +2
Query: 212 DRKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESIDKVM 391
+R L++ L ++ T +E+ + FG +G + I V NT +RG AF+V+ E I
Sbjct: 18 NRILYIKNLPYKITTEEMYEIFGKFGAVRQIRVG---NTAETRGTAFVVY---EDIFDAK 71
Query: 392 AAGEH 406
A EH
Sbjct: 72 TACEH 76
>Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical
protein F26A3.2 protein.
Length = 154
Score = 36.3 bits (80), Expect = 0.019
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +2
Query: 461 IFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQXKGFCFITF 601
++VG LS +D++ F G + V M D+ K GFCF+ +
Sbjct: 39 LYVGNLSYYTKEDQVYELFGRAGDVRRVIMGLDRFKKTPCGFCFVEY 85
Score = 33.1 bits (72), Expect = 0.17
Identities = 20/85 (23%), Positives = 40/85 (47%)
Frame = +2
Query: 221 LFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAG 400
L+VG LS+ T + ++ + FG G++ + + D GF F+ + E + +
Sbjct: 39 LYVGNLSYYTKEDQVYELFGRAGDVRRVIMGLDRFKKTPCGFCFVEYYTREDAELAL--- 95
Query: 401 EHTINNKKVDPKKAKARHGKIFVGG 475
I+N ++D + +A F+ G
Sbjct: 96 -QNISNTRMDDRVIRADWDAGFIEG 119
>Z19154-9|CAA79552.2| 559|Caenorhabditis elegans Hypothetical
protein C40H1.1 protein.
Length = 559
Score = 36.3 bits (80), Expect = 0.019
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 5/82 (6%)
Frame = +2
Query: 206 DDDRKLFVGGLSWETTDKEL-RDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESID 382
D R +F+GG+ T ++L R G YG++ + + DP +G A + F ++
Sbjct: 362 DHRRTVFIGGVPRPTRAQDLARCLEGHYGKVSYVGIDIDPELKYPKGAARVTFSTSQAFV 421
Query: 383 KVMAAG----EHTINNKKVDPK 436
+ ++ H NNK+V+ K
Sbjct: 422 RAISGRFVQVNHAENNKRVEIK 443
Score = 31.1 bits (67), Expect = 0.70
Identities = 14/52 (26%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +2
Query: 386 VMAAGEHTINNKKVDPKKAKARHG-KIFVGGLSSEISDDEIRNFFSEFGTIL 538
+M + + K P A+ + K+F+GGL ++S++++ F FG +L
Sbjct: 221 LMGVSKSCLEASKKRPISAEPLYSRKVFIGGLPIDVSEEQVWATFGAFGKVL 272
Score = 29.5 bits (63), Expect = 2.1
Identities = 10/27 (37%), Positives = 21/27 (77%)
Frame = +2
Query: 215 RKLFVGGLSWETTDKELRDHFGAYGEI 295
RK+F+GGL + +++++ FGA+G++
Sbjct: 245 RKVFIGGLPIDVSEEQVWATFGAFGKV 271
>Z69384-5|CAA93419.2| 408|Caenorhabditis elegans Hypothetical
protein T11G6.8 protein.
Length = 408
Score = 35.1 bits (77), Expect = 0.043
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 4/84 (4%)
Frame = +2
Query: 221 LFVGGL----SWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESIDKV 388
L++G L + + T+K+L D F YG+I + V T+ +G AFI F E+ ++
Sbjct: 237 LYIGNLGPSGAQQVTEKDLNDFFYQYGDIRCLRVLTE------KGCAFIEFTTREAAER- 289
Query: 389 MAAGEHTINNKKVDPKKAKARHGK 460
A E + N + K+ R G+
Sbjct: 290 --AAERSFNKTFIKGKRLTIRWGE 311
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 34.7 bits (76), Expect = 0.057
Identities = 19/55 (34%), Positives = 31/55 (56%)
Frame = +2
Query: 221 LFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESIDK 385
LFV L+ TTD++L F +G+I + + D +G S +AFI F +S ++
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQ 297
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +2
Query: 461 IFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQXKGFCFITF*I*XSCK 622
+FV L+ +D+++ FS FG I E+ D+ + FI F SC+
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCE 296
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 34.7 bits (76), Expect = 0.057
Identities = 19/55 (34%), Positives = 31/55 (56%)
Frame = +2
Query: 221 LFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESIDK 385
LFV L+ TTD++L F +G+I + + D +G S +AFI F +S ++
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQ 297
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +2
Query: 461 IFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQXKGFCFITF*I*XSCK 622
+FV L+ +D+++ FS FG I E+ D+ + FI F SC+
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCE 296
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 34.7 bits (76), Expect = 0.057
Identities = 19/55 (34%), Positives = 31/55 (56%)
Frame = +2
Query: 221 LFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESIDK 385
LFV L+ TTD++L F +G+I + + D +G S +AFI F +S ++
Sbjct: 174 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQ 228
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +2
Query: 461 IFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQXKGFCFITF*I*XSCK 622
+FV L+ +D+++ FS FG I E+ D+ + FI F SC+
Sbjct: 174 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCE 227
>Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical
protein R74.5a protein.
Length = 404
Score = 34.7 bits (76), Expect = 0.057
Identities = 25/102 (24%), Positives = 46/102 (45%), Gaps = 2/102 (1%)
Frame = +2
Query: 161 GGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSR 340
G + + S + D R+L V + ++ + +L F G + ++V+ N S+
Sbjct: 82 GPVAPNDRSTSSSSTDGPRRLHVSNIPFKYREPDLTAMFEKVGPV--VDVEIIFNERGSK 139
Query: 341 GFAFIVFKAPESIDKVMAA-GEHTINNKKVDPKKAKAR-HGK 460
GF F+ + P+ D+ A TI ++V+ A R H K
Sbjct: 140 GFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLATQRVHNK 181
>U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya binding
family protein 2 protein.
Length = 422
Score = 34.7 bits (76), Expect = 0.057
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = +2
Query: 458 KIFVGGLSSEISDDEIRNFFSEFGTILXVEMP 553
K+FVGGL S + + +I NFFS +G L V+ P
Sbjct: 89 KVFVGGLPSCVKESDILNFFSRYGR-LQVDWP 119
>DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding
protein ASD-1 protein.
Length = 404
Score = 34.7 bits (76), Expect = 0.057
Identities = 25/102 (24%), Positives = 46/102 (45%), Gaps = 2/102 (1%)
Frame = +2
Query: 161 GGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSR 340
G + + S + D R+L V + ++ + +L F G + ++V+ N S+
Sbjct: 82 GPVAPNDRSTSSSSTDGPRRLHVSNIPFKYREPDLTAMFEKVGPV--VDVEIIFNERGSK 139
Query: 341 GFAFIVFKAPESIDKVMAA-GEHTINNKKVDPKKAKAR-HGK 460
GF F+ + P+ D+ A TI ++V+ A R H K
Sbjct: 140 GFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLATQRVHNK 181
>U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical
protein F25B5.7d protein.
Length = 374
Score = 33.9 bits (74), Expect = 0.099
Identities = 31/133 (23%), Positives = 55/133 (41%), Gaps = 2/133 (1%)
Frame = +2
Query: 143 GNAENGGGDSQDHNSAEAPGRDDDRK--LFVGGLSWETTDKELRDHFGAYGEIXSINVKT 316
G + NG ++ E P + + LFVG L E + EL++ F +G+I +
Sbjct: 90 GTSFNGAAFTESQLMDEVPKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAECYLS- 148
Query: 317 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISD 496
+GFAF+ + A + I + + + I V LS +S+
Sbjct: 149 ------GKGFAFLRLDTRAHAESAKEAIDGRIIHGRQVRVRFAVHGAAIRVKELSPTVSN 202
Query: 497 DEIRNFFSEFGTI 535
+ + + FS FG +
Sbjct: 203 EMLYHAFSHFGDV 215
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 33.9 bits (74), Expect = 0.099
Identities = 31/133 (23%), Positives = 55/133 (41%), Gaps = 2/133 (1%)
Frame = +2
Query: 143 GNAENGGGDSQDHNSAEAPGRDDDRK--LFVGGLSWETTDKELRDHFGAYGEIXSINVKT 316
G + NG ++ E P + + LFVG L E + EL++ F +G+I +
Sbjct: 90 GTSFNGAAFTESQLMDEVPKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAECYLS- 148
Query: 317 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISD 496
+GFAF+ + A + I + + + I V LS +S+
Sbjct: 149 ------GKGFAFLRLDTRAHAESAKEAIDGRIIHGRQVRVRFAVHGAAIRVKELSPTVSN 202
Query: 497 DEIRNFFSEFGTI 535
+ + + FS FG +
Sbjct: 203 EMLYHAFSHFGDV 215
>Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical
protein R05H10.2 protein.
Length = 608
Score = 32.7 bits (71), Expect = 0.23
Identities = 13/54 (24%), Positives = 31/54 (57%)
Frame = +2
Query: 209 DDRKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAP 370
+ + +F+ LS++T ++ +++ +G+I + ++G S+G AF+ F P
Sbjct: 261 EGKVVFLRNLSYDTKEELIKEELSKFGKIDLAIICKYKDSGHSKGTAFVHFSTP 314
>AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily
assigned gene nameprotein 262 protein.
Length = 302
Score = 32.7 bits (71), Expect = 0.23
Identities = 12/48 (25%), Positives = 28/48 (58%)
Frame = +2
Query: 458 KIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQXKGFCFITF 601
++F G L +E+SD+ + F ++ + ++ + N+ KG+ F++F
Sbjct: 204 RVFCGDLGNEVSDELLAKAFRKYPSFQKAKVVRESRTNKSKGYGFVSF 251
>L07144-4|AAK21440.2| 187|Caenorhabditis elegans Hypothetical
protein R05D3.8 protein.
Length = 187
Score = 31.9 bits (69), Expect = 0.40
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +2
Query: 209 DDRKLFVGGLSWET-TDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESIDK 385
+ ++LFV + T KEL+ +FGAYG+I + +D + G F I F S+D
Sbjct: 29 ESKRLFVSYFPLDRLTSKELKMNFGAYGKITDVEFVSD-SEGPLH-FCIITFADSRSVDV 86
Query: 386 VM 391
++
Sbjct: 87 LL 88
>AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical
protein ZK616.1 protein.
Length = 491
Score = 31.5 bits (68), Expect = 0.53
Identities = 12/47 (25%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +2
Query: 458 KIFVGGLSSEISDDEIRNFFSEFGTILXVEMPF-DKTKNQXKGFCFI 595
+++VGG S+ +S ++IRN ++ V + + + +GF F+
Sbjct: 10 RLYVGGFSTNLSSEQIRNLITQLAAPFEVSIDIVENGSRKHRGFAFV 56
>U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical
protein F25B5.7b protein.
Length = 165
Score = 31.1 bits (67), Expect = 0.70
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2
Query: 431 PKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTI 535
PKK ++FVG L +E+ + E++ FS G I
Sbjct: 108 PKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDI 142
>Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 30.7 bits (66), Expect = 0.92
Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = +2
Query: 398 GEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTIL-XVEMPFDKTKNQ 574
G+HT + + K +FVG +S + SD+ IR +E G + + K Q
Sbjct: 31 GQHTPAQQS---SQQKPDSSPVFVGNISDKCSDEFIRKILNECGNVASWKRIKGSNGKLQ 87
Query: 575 XKGFCFIT 598
GFC T
Sbjct: 88 GFGFCHFT 95
>Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 30.7 bits (66), Expect = 0.92
Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = +2
Query: 398 GEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTIL-XVEMPFDKTKNQ 574
G+HT + + K +FVG +S + SD+ IR +E G + + K Q
Sbjct: 31 GQHTPAQQS---SQQKPDSSPVFVGNISDKCSDEFIRKILNECGNVASWKRIKGSNGKLQ 87
Query: 575 XKGFCFIT 598
GFC T
Sbjct: 88 GFGFCHFT 95
>Z99279-4|CAB16494.1| 121|Caenorhabditis elegans Hypothetical
protein Y57G11A.5 protein.
Length = 121
Score = 30.3 bits (65), Expect = 1.2
Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Frame = +2
Query: 209 DDRKLFVGGLSWETTDKEL-RDHFGAYGEIXSI-----NVKTDPNTGRSRGFAFIVFK 364
++R+++VG + ++ T+KEL D Y I ++ +K+ R GFAF+ FK
Sbjct: 15 ENRQVYVGNMPFDATEKELNNDALTIYDAIEAVFSVMGPIKSIWMAKRPPGFAFVTFK 72
>U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform c protein.
Length = 118
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 458 KIFVGGLSSEISDDEIRNFFSEFGTILXV 544
K++VGGL S+ + E+ F FG I V
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKV 32
>U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform b protein.
Length = 153
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 458 KIFVGGLSSEISDDEIRNFFSEFGTILXV 544
K++VGGL S+ + E+ F FG I V
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKV 32
>U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform a protein.
Length = 179
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 458 KIFVGGLSSEISDDEIRNFFSEFGTILXV 544
K++VGGL S+ + E+ F FG I V
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKV 32
>Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical protein
F47A4.2 protein.
Length = 3498
Score = 29.5 bits (63), Expect = 2.1
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = -2
Query: 310 YINTLYFTVCSKMITELLICGLPAQPTNKKFSVVIASWGLSTVMILRITATVL 152
Y NT TV +K + E + + PT K ++ SW +S V + + T L
Sbjct: 1864 YANTTVGTVAAKFLREAALL-MDTPPTTPKERLLQCSWAMSKVPFINMILTCL 1915
>U28944-8|AAK68193.1| 103|Caenorhabditis elegans Hypothetical
protein C18A3.5c protein.
Length = 103
Score = 29.5 bits (63), Expect = 2.1
Identities = 10/34 (29%), Positives = 22/34 (64%)
Frame = +2
Query: 461 IFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDK 562
++VG L S +++D I F++ G++ ++ FD+
Sbjct: 48 LYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDE 81
>Z99277-2|CAB16487.1| 557|Caenorhabditis elegans Hypothetical
protein Y53C12A.3 protein.
Length = 557
Score = 29.1 bits (62), Expect = 2.8
Identities = 23/87 (26%), Positives = 35/87 (40%), Gaps = 2/87 (2%)
Frame = +2
Query: 125 TDNQLNGNAENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIXSI 304
T+N + N GG + N P +L G + WE K+++D F +YG I
Sbjct: 41 TENTRQRSNSNAGGSPDEQN----PQFGMQAQL--GKMMWEAGSKQVQDTFQSYGRIDLF 94
Query: 305 N--VKTDPNTGRSRGFAFIVFKAPESI 379
DP R+R + + P I
Sbjct: 95 RPYFDVDPAEVRTRLIRSFIPRKPSQI 121
>Z68160-1|CAA92294.2| 489|Caenorhabditis elegans Hypothetical
protein D1046.1 protein.
Length = 489
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/60 (25%), Positives = 29/60 (48%), Gaps = 4/60 (6%)
Frame = +2
Query: 224 FVGGLSWETTDKELRDHFGAYG----EIXSINVKTDPNTGRSRGFAFIVFKAPESIDKVM 391
+VG L W TTD +L + G + + + G+S+G+A +V + ++ + M
Sbjct: 87 YVGNLLWYTTDADLLKALQSTGLARSQFADMKFFENRTNGQSKGYALLVLNSDAAVKQTM 146
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 29.1 bits (62), Expect = 2.8
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = +2
Query: 458 KIFVGGLSSEISDDEIRNFFSEFGTILXV 544
+I++G L+S +S+ +I +FF +G I V
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDV 32
Score = 28.3 bits (60), Expect = 4.9
Identities = 18/86 (20%), Positives = 39/86 (45%)
Frame = +2
Query: 218 KLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 397
++++G L+ ++K++ F YG+I + +K GF F+ F + +
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLK--------NGFGFVEFDDKRDAEDAV-- 53
Query: 398 GEHTINNKKVDPKKAKARHGKIFVGG 475
H +N K++ ++ + K GG
Sbjct: 54 --HDLNGKELGGERVILDYSKPRGGG 77
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 29.1 bits (62), Expect = 2.8
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = +2
Query: 458 KIFVGGLSSEISDDEIRNFFSEFGTILXV 544
+I++G L+S +S+ +I +FF +G I V
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDV 32
Score = 28.3 bits (60), Expect = 4.9
Identities = 18/86 (20%), Positives = 39/86 (45%)
Frame = +2
Query: 218 KLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 397
++++G L+ ++K++ F YG+I + +K GF F+ F + +
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLK--------NGFGFVEFDDKRDAEDAV-- 53
Query: 398 GEHTINNKKVDPKKAKARHGKIFVGG 475
H +N K++ ++ + K GG
Sbjct: 54 --HDLNGKELGGERVILDYSKPRGGG 77
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 29.1 bits (62), Expect = 2.8
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = +2
Query: 458 KIFVGGLSSEISDDEIRNFFSEFGTILXV 544
+I++G L+S +S+ +I +FF +G I V
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDV 32
Score = 28.3 bits (60), Expect = 4.9
Identities = 18/86 (20%), Positives = 39/86 (45%)
Frame = +2
Query: 218 KLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 397
++++G L+ ++K++ F YG+I + +K GF F+ F + +
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLK--------NGFGFVEFDDKRDAEDAV-- 53
Query: 398 GEHTINNKKVDPKKAKARHGKIFVGG 475
H +N K++ ++ + K GG
Sbjct: 54 --HDLNGKELGGERVILDYSKPRGGG 77
>Z46242-15|CAA86337.2| 2507|Caenorhabditis elegans Hypothetical
protein F10F2.1 protein.
Length = 2507
Score = 29.1 bits (62), Expect = 2.8
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +2
Query: 95 NNDNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDDRK 220
N++N + + +N NG NGG + N E+ G D + +
Sbjct: 1323 NSENVNSETSPENGSNGKLANGGDNLSIKNGIESNGNDGEEE 1364
>Z35598-8|CAA84657.2| 2507|Caenorhabditis elegans Hypothetical protein
F10F2.1 protein.
Length = 2507
Score = 29.1 bits (62), Expect = 2.8
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +2
Query: 95 NNDNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDDRK 220
N++N + + +N NG NGG + N E+ G D + +
Sbjct: 1323 NSENVNSETSPENGSNGKLANGGDNLSIKNGIESNGNDGEEE 1364
>AF003140-8|AAB54169.1| 396|Caenorhabditis elegans Hypothetical
protein C44E4.4 protein.
Length = 396
Score = 28.3 bits (60), Expect = 4.9
Identities = 24/110 (21%), Positives = 48/110 (43%), Gaps = 4/110 (3%)
Frame = +2
Query: 284 YGEIXSINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGKI 463
+ + SI+ T+ + + E K+ E+ + ++ + K +H +
Sbjct: 54 FNRLASISKDTEKIANAVKNSGSGIISVSEDNQKIRRNEENPVPENSLEYWQ-KIKHRTV 112
Query: 464 FVGGLSSEISDDEIRNFFSEFGTILXVEM----PFDKTKNQXKGFCFITF 601
++ G S++ D+I + ++FG V M P D+T KG FIT+
Sbjct: 113 YMKGFSTDTQLDDIIQWANQFGETENVLMRRLKPGDRT---FKGSVFITY 159
>AC024791-14|AAF60658.1| 767|Caenorhabditis elegans P300/cbp
associated factor homologprotein 1 protein.
Length = 767
Score = 28.3 bits (60), Expect = 4.9
Identities = 21/56 (37%), Positives = 28/56 (50%)
Frame = +2
Query: 287 GEIXSINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH 454
G I I +T P SRGF IVF A ++++V G H +N+ K K K H
Sbjct: 475 GVIGGICFRTFP----SRGFVEIVFCAITAMEQVKGYGTHLMNHCKDYMIKNKIYH 526
>Z69634-9|CAO82013.1| 575|Caenorhabditis elegans Hypothetical
protein B0001.3b protein.
Length = 575
Score = 27.9 bits (59), Expect = 6.5
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +2
Query: 116 DITTDNQLNGNAENGGGDSQDHNSAEAPGRDDD 214
D+ N+ N ++ + GGDS + E DDD
Sbjct: 416 DVAPGNRRNNSSSSAGGDSHLRGTVEFSSSDDD 448
>Z69634-8|CAA93452.4| 591|Caenorhabditis elegans Hypothetical
protein B0001.3a protein.
Length = 591
Score = 27.9 bits (59), Expect = 6.5
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +2
Query: 116 DITTDNQLNGNAENGGGDSQDHNSAEAPGRDDD 214
D+ N+ N ++ + GGDS + E DDD
Sbjct: 432 DVAPGNRRNNSSSSAGGDSHLRGTVEFSSSDDD 464
>AF101318-12|AAC69350.2| 400|Caenorhabditis elegans Hypothetical
protein Y73C8C.10 protein.
Length = 400
Score = 27.9 bits (59), Expect = 6.5
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = +2
Query: 278 GAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESIDK 385
G YG I + NV DP S G A I+FK ES ++
Sbjct: 71 GKYGVILTSNVLVDPTNLESAGNA-IIFKEGESHER 105
>AF099920-4|AAK29844.2| 363|Caenorhabditis elegans Serpentine
receptor, class w protein95 protein.
Length = 363
Score = 27.5 bits (58), Expect = 8.6
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -3
Query: 174 CESPPPFSAFPLSWLSVVIS 115
CE P P S F + W++VVI+
Sbjct: 107 CEPPAPLSFFYMYWINVVIN 126
>AF067619-1|AAC17568.2| 368|Caenorhabditis elegans Hypothetical
protein K03E5.3 protein.
Length = 368
Score = 27.5 bits (58), Expect = 8.6
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +3
Query: 312 RQIQTQADHEGLPSLCLR 365
+ I+T D EG+PS CLR
Sbjct: 74 KMIRTDRDEEGIPSTCLR 91
>AC024746-7|AAF60403.1| 246|Caenorhabditis elegans Hypothetical
protein Y110A2AL.5 protein.
Length = 246
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/44 (29%), Positives = 19/44 (43%)
Frame = -2
Query: 253 CGLPAQPTNKKFSVVIASWGLSTVMILRITATVLCISIKLVVGG 122
C P QP + S+V+ W + + R A CI L + G
Sbjct: 143 CPAPGQPFRRTESLVVCIWTFNETVATREEAKTFCIGKGLKLTG 186
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,433,839
Number of Sequences: 27780
Number of extensions: 295333
Number of successful extensions: 1134
Number of sequences better than 10.0: 127
Number of HSP's better than 10.0 without gapping: 901
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1079
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1423653030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -