Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_D22
(653 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 351 3e-97
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 346 8e-96
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 339 9e-94
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 227 5e-60
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 198 4e-51
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 173 1e-43
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 154 7e-38
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 152 2e-37
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 151 5e-37
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 150 1e-36
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 149 1e-36
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 149 2e-36
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 147 6e-36
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 120 8e-28
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 117 1e-26
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 115 3e-26
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 110 1e-24
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 91 5e-19
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 89 3e-18
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 84 1e-16
SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44) 75 5e-14
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 71 1e-12
SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0) 67 1e-11
SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 2e-09
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 53 2e-07
SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18) 50 1e-06
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 46 2e-05
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 6e-05
SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25) 35 0.067
SB_49423| Best HMM Match : Dicty_CAD (HMM E-Value=6.4) 33 0.20
SB_8591| Best HMM Match : DUF601 (HMM E-Value=0.23) 31 1.1
SB_4335| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_46898| Best HMM Match : Amelogenin (HMM E-Value=4.2) 29 2.5
SB_52687| Best HMM Match : Myb_DNA-binding (HMM E-Value=2.7e-09) 29 3.3
SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_50693| Best HMM Match : C2 (HMM E-Value=0) 29 4.4
SB_25442| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_53927| Best HMM Match : Adeno_E3_CR1 (HMM E-Value=1.8) 28 7.6
SB_1799| Best HMM Match : zf-C2H2 (HMM E-Value=0) 28 7.6
SB_48387| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 351 bits (863), Expect = 3e-97
Identities = 163/196 (83%), Positives = 168/196 (85%)
Frame = +1
Query: 64 IYSSHK*NKMREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYY 243
+YSS KMREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYY
Sbjct: 205 VYSSKLLFKMREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYY 264
Query: 244 NEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 423
NEA+GGKYVPRA+LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE
Sbjct: 265 NEATGGKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 324
Query: 424 LVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIXEXYPDRIMNTYSVVP 603
LVDSVLDVVRKEAESCDCLQGFQ KI E YPDRIMNT+SVVP
Sbjct: 325 LVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVP 384
Query: 604 SPKVSDTVXEPYNATL 651
SPKVSDTV EPYNATL
Sbjct: 385 SPKVSDTVVEPYNATL 400
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 346 bits (851), Expect = 8e-96
Identities = 160/187 (85%), Positives = 163/187 (87%)
Frame = +1
Query: 91 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 270
MREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 271 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 450
PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
Sbjct: 61 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120
Query: 451 RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIXEXYPDRIMNTYSVVPSPKVSDTVX 630
RKEAESCDCLQGFQ KI E YPDRIMNT+SVVPSPKVSDTV
Sbjct: 121 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV 180
Query: 631 EPYNATL 651
EPYNATL
Sbjct: 181 EPYNATL 187
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 339 bits (834), Expect = 9e-94
Identities = 153/187 (81%), Positives = 163/187 (87%)
Frame = +1
Query: 91 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 270
MREIV +QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVSLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 271 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 450
PR++L+DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRSVLIDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELMDSVLDVV 120
Query: 451 RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIXEXYPDRIMNTYSVVPSPKVSDTVX 630
RKEAESCDC+QGFQ KI E YPDRIMNT+S+VPSPKVSDTV
Sbjct: 121 RKEAESCDCIQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSIVPSPKVSDTVV 180
Query: 631 EPYNATL 651
EPYNATL
Sbjct: 181 EPYNATL 187
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 227 bits (556), Expect = 5e-60
Identities = 106/131 (80%), Positives = 109/131 (83%)
Frame = +1
Query: 259 GKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 438
GKYVPRA+LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV
Sbjct: 2 GKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 61
Query: 439 LDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIXEXYPDRIMNTYSVVPSPKVS 618
LDVVRKEAESCDC+QGFQ KI E YPDRIMNT+SVVPSPKVS
Sbjct: 62 LDVVRKEAESCDCIQGFQLTHSLGGGTGSGMVTLLILKIREEYPDRIMNTFSVVPSPKVS 121
Query: 619 DTVXEPYNATL 651
DTV EPYNATL
Sbjct: 122 DTVVEPYNATL 132
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 198 bits (482), Expect = 4e-51
Identities = 88/92 (95%), Positives = 90/92 (97%)
Frame = +1
Query: 91 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 270
MREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 271 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVF 366
PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVF
Sbjct: 61 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVF 92
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 173 bits (421), Expect = 1e-43
Identities = 76/121 (62%), Positives = 91/121 (75%)
Frame = +1
Query: 253 SGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 432
+GG+YVPR+ILVDLEPGTMD+VR GP G +FRPDNFV QSGA NNWAKGHY+EGAEL+D
Sbjct: 11 TGGRYVPRSILVDLEPGTMDAVRGGPLGNMFRPDNFVNSQSGAANNWAKGHYSEGAELID 70
Query: 433 SVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIXEXYPDRIMNTYSVVPSPK 612
++ DV+RKEAE+CDC+QG Q KI E YPDRI++ +SVVPSPK
Sbjct: 71 NIFDVLRKEAENCDCMQGVQLIQALGGGTGSGLGTLILSKIREEYPDRILSAFSVVPSPK 130
Query: 613 V 615
V
Sbjct: 131 V 131
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 154 bits (373), Expect = 7e-38
Identities = 75/189 (39%), Positives = 104/189 (55%), Gaps = 2/189 (1%)
Frame = +1
Query: 91 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 264
MRE + I GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 265 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 444
+VPRA+ VDLEP +D VR+G + Q+F P+ V G+ A NN+A+GHYT G E+VD VLD
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHYTVGKEIVDLVLD 120
Query: 445 VVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIXEXYPDRIMNTYSVVPSPKVSDT 624
+RK A+ C LQGF ++ Y + +++ P+P+VS
Sbjct: 121 RIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQVSTA 180
Query: 625 VXEPYNATL 651
V EPYN+ L
Sbjct: 181 VVEPYNSIL 189
Score = 151 bits (367), Expect = 4e-37
Identities = 73/188 (38%), Positives = 103/188 (54%), Gaps = 2/188 (1%)
Frame = +1
Query: 94 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKY 267
RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 435 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 494
Query: 268 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 447
VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 495 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIVDLVLDR 554
Query: 448 VRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIXEXYPDRIMNTYSVVPSPKVSDTV 627
+RK A+ C LQGF ++ Y + +++ P+P+VS V
Sbjct: 555 IRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQVSTAV 614
Query: 628 XEPYNATL 651
EPYN+ L
Sbjct: 615 VEPYNSIL 622
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 152 bits (369), Expect = 2e-37
Identities = 73/189 (38%), Positives = 104/189 (55%), Gaps = 2/189 (1%)
Frame = +1
Query: 91 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 264
+RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 586 VRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 645
Query: 265 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 444
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD
Sbjct: 646 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLD 705
Query: 445 VVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIXEXYPDRIMNTYSVVPSPKVSDT 624
+RK A+ C LQGF ++ Y + +++ P+P+VS
Sbjct: 706 RIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQVSTA 765
Query: 625 VXEPYNATL 651
V EPYN+ L
Sbjct: 766 VVEPYNSIL 774
Score = 150 bits (364), Expect = 8e-37
Identities = 71/188 (37%), Positives = 103/188 (54%), Gaps = 2/188 (1%)
Frame = +1
Query: 94 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKY 267
RE + + GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 66 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 125
Query: 268 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 447
VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 126 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 185
Query: 448 VRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIXEXYPDRIMNTYSVVPSPKVSDTV 627
+RK A+ C LQGF ++ Y + +++ P+P++S V
Sbjct: 186 IRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQISTAV 245
Query: 628 XEPYNATL 651
EPYN+ L
Sbjct: 246 VEPYNSIL 253
Score = 65.3 bits (152), Expect = 4e-11
Identities = 31/77 (40%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Frame = +1
Query: 94 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 267
RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 514 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 573
Query: 268 VPRAILVDLEPGTMDSV 318
VPRA+ VDLEP + +
Sbjct: 574 VPRAVFVDLEPTVRECI 590
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 151 bits (366), Expect = 5e-37
Identities = 72/188 (38%), Positives = 103/188 (54%), Gaps = 2/188 (1%)
Frame = +1
Query: 94 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKY 267
RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 60
Query: 268 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 447
VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 61 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIIDLVLDR 120
Query: 448 VRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIXEXYPDRIMNTYSVVPSPKVSDTV 627
+RK A+ C LQGF ++ Y + +++ P+P+VS V
Sbjct: 121 IRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAV 180
Query: 628 XEPYNATL 651
EPYN+ L
Sbjct: 181 VEPYNSIL 188
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 150 bits (363), Expect = 1e-36
Identities = 69/189 (36%), Positives = 104/189 (55%), Gaps = 2/189 (1%)
Frame = +1
Query: 91 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 264
MRE + + GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGSGK 60
Query: 265 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 444
+VPRA+ DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D+VLD
Sbjct: 61 HVPRAVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDTVLD 120
Query: 445 VVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIXEXYPDRIMNTYSVVPSPKVSDT 624
+RK A+ C LQGF ++ Y + +++ P+P++S
Sbjct: 121 RLRKLADGCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQISTA 180
Query: 625 VXEPYNATL 651
V EPYN+ L
Sbjct: 181 VVEPYNSVL 189
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 149 bits (362), Expect = 1e-36
Identities = 71/189 (37%), Positives = 103/189 (54%), Gaps = 2/189 (1%)
Frame = +1
Query: 91 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 264
MRE + I GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 265 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 444
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 120
Query: 445 VVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIXEXYPDRIMNTYSVVPSPKVSDT 624
RK A+ C LQGF ++ Y + +++ P+P++S
Sbjct: 121 RCRKLADQCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQISTA 180
Query: 625 VXEPYNATL 651
V EPYN+ L
Sbjct: 181 VVEPYNSIL 189
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 149 bits (361), Expect = 2e-36
Identities = 69/188 (36%), Positives = 103/188 (54%), Gaps = 2/188 (1%)
Frame = +1
Query: 94 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKY 267
RE V I GQ G Q+G WE+ EHGI P G D + + N +++E GK+
Sbjct: 420 RECVSIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 479
Query: 268 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 447
VPRA+ VDLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G + +D+VLD
Sbjct: 480 VPRAVFVDLEPSVIDEIRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKDHIDNVLDR 539
Query: 448 VRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIXEXYPDRIMNTYSVVPSPKVSDTV 627
+RK A+ C LQGF ++ Y + +++ P+P++S V
Sbjct: 540 IRKLADQCSGLQGFLVFHSFGGGTGSGFSALLLERLSVDYGKKSKLEFAIYPAPQISTAV 599
Query: 628 XEPYNATL 651
EPYN+ L
Sbjct: 600 VEPYNSVL 607
Score = 131 bits (316), Expect = 6e-31
Identities = 61/174 (35%), Positives = 94/174 (54%), Gaps = 2/174 (1%)
Frame = +1
Query: 136 IGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKYVPRAILVDLEPGTM 309
+G WE+ EHGI P G D + + N +++E GK+VPRA+ DLEP +
Sbjct: 1 MGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFCDLEPTVV 60
Query: 310 DSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGF 489
D VR+G + Q+F P+ + G+ A NN+A+GHYT G +L++ VLD +RK A+ C LQGF
Sbjct: 61 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKQLIEIVLDRLRKLADQCTGLQGF 120
Query: 490 QXXXXXXXXXXXXXXXXXXXKIXEXYPDRIMNTYSVVPSPKVSDTVXEPYNATL 651
++ Y + +++ P+P++S V EPYN+ L
Sbjct: 121 LIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSIL 174
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 147 bits (357), Expect = 6e-36
Identities = 68/188 (36%), Positives = 102/188 (54%), Gaps = 2/188 (1%)
Frame = +1
Query: 94 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKY 267
RE + + GQ G Q+G WE+ EHGI P G D + + N +++E GK+
Sbjct: 806 RECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 865
Query: 268 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 447
VPRA+ DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 866 VPRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDLVLDR 925
Query: 448 VRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIXEXYPDRIMNTYSVVPSPKVSDTV 627
+RK A+ C LQGF ++ Y + +++ P+P++S V
Sbjct: 926 IRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQISTAV 985
Query: 628 XEPYNATL 651
EPYN+ L
Sbjct: 986 VEPYNSIL 993
Score = 146 bits (355), Expect = 1e-35
Identities = 71/188 (37%), Positives = 100/188 (53%), Gaps = 2/188 (1%)
Frame = +1
Query: 94 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKY 267
RE + I GQ G QIG WE+ EHGI P G D + + N ++ E GK+
Sbjct: 373 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFAETGAGKH 432
Query: 268 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 447
VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E +D VLD
Sbjct: 433 VPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEQIDIVLDR 492
Query: 448 VRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIXEXYPDRIMNTYSVVPSPKVSDTV 627
+RK A+ C LQGF ++ Y + +++ P+P +S V
Sbjct: 493 LRKLADGCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPHISSAV 552
Query: 628 XEPYNATL 651
EPYN+ L
Sbjct: 553 VEPYNSIL 560
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 120 bits (290), Expect = 8e-28
Identities = 66/189 (34%), Positives = 92/189 (48%), Gaps = 2/189 (1%)
Frame = +1
Query: 91 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 264
MRE + I GQ G QIG WE+ EHGI P G D + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTQGGGDDSFNTFFSETGAGK 60
Query: 265 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 444
+VPRA+ VDLEP + P+ + G+ A NN+A+GHYT G + VD VLD
Sbjct: 61 HVPRAVFVDLEPTVV----------ALSPEQLITGKEDAANNYARGHYTIGKQQVDQVLD 110
Query: 445 VVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIXEXYPDRIMNTYSVVPSPKVSDT 624
+RK A+ C LQGF ++ Y + ++V P+P ++
Sbjct: 111 RLRKLADQCSGLQGFFIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAVYPAPHIASA 170
Query: 625 VXEPYNATL 651
V EPYN+ L
Sbjct: 171 VVEPYNSIL 179
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 117 bits (281), Expect = 1e-26
Identities = 52/143 (36%), Positives = 79/143 (55%)
Frame = +1
Query: 223 ERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKG 402
+ N ++ E GK+VPRA+ VDLEP +D +R+G + Q+F P+ + G+ A NN+A+G
Sbjct: 12 DSFNTFFAETGAGKHVPRAVFVDLEPTVIDEIRTGTYRQLFHPEQLLSGKEDAANNYARG 71
Query: 403 HYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIXEXYPDRIM 582
HYT G E +D LD +RK A+ C LQGF ++ Y +
Sbjct: 72 HYTVGKEHIDLALDRIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSK 131
Query: 583 NTYSVVPSPKVSDTVXEPYNATL 651
++V P+P++S V EPYN+ L
Sbjct: 132 LEFAVYPAPQISTAVVEPYNSIL 154
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 115 bits (277), Expect = 3e-26
Identities = 52/136 (38%), Positives = 77/136 (56%)
Frame = +1
Query: 244 NEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 423
+EA+ GKYVPRA+LVDLEP +D VR+G + ++ P+ + G+ A NN+A+GHYT G E
Sbjct: 965 SEAAAGKYVPRAVLVDLEPTVIDEVRTGMYRYLYHPEQMISGKEDAANNYARGHYTIGKE 1024
Query: 424 LVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIXEXYPDRIMNTYSVVP 603
+V+ V+D +RK + C LQGF + Y + ++V P
Sbjct: 1025 MVEVVMDKIRKMTDQCSGLQGFLIFHSFGGGTGSGFASLITEHLSVDYGKKSKLEFAVYP 1084
Query: 604 SPKVSDTVXEPYNATL 651
+P +S V EPYN+ L
Sbjct: 1085 APHISTAVVEPYNSVL 1100
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 110 bits (264), Expect = 1e-24
Identities = 50/94 (53%), Positives = 63/94 (67%)
Frame = +1
Query: 370 QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXX 549
Q+ A NNWAKG YTEGAEL+DS +D +RK AE+CD +QGFQ
Sbjct: 2 QNSAANNWAKGFYTEGAELMDSGMDCIRKLAENCDTVQGFQIAHSLGGGTGSGLGSLLLS 61
Query: 550 KIXEXYPDRIMNTYSVVPSPKVSDTVXEPYNATL 651
KI E YPDR+++++ V+PSP VS+TV EPYNATL
Sbjct: 62 KIREEYPDRLVSSFCVLPSPLVSETVTEPYNATL 95
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 91.5 bits (217), Expect = 5e-19
Identities = 41/114 (35%), Positives = 62/114 (54%)
Frame = +1
Query: 310 DSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGF 489
D VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK A+ C LQGF
Sbjct: 13 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGF 72
Query: 490 QXXXXXXXXXXXXXXXXXXXKIXEXYPDRIMNTYSVVPSPKVSDTVXEPYNATL 651
++ Y + +++ P+P++S V EPYN+ L
Sbjct: 73 LIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSIL 126
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 89.0 bits (211), Expect = 3e-18
Identities = 40/112 (35%), Positives = 61/112 (54%)
Frame = +1
Query: 316 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQX 495
VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK A+ C LQGF
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGFLI 62
Query: 496 XXXXXXXXXXXXXXXXXXKIXEXYPDRIMNTYSVVPSPKVSDTVXEPYNATL 651
++ Y + +++ P+P++S V EPYN+ L
Sbjct: 63 FHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSIL 114
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 83.8 bits (198), Expect = 1e-16
Identities = 38/112 (33%), Positives = 59/112 (52%)
Frame = +1
Query: 316 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQX 495
+R+G + Q+F P+ + G+ A NN+A+GHYT G E +D LD +RK A+ C LQGF
Sbjct: 3 IRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHIDLALDRIRKLADQCTGLQGFLI 62
Query: 496 XXXXXXXXXXXXXXXXXXKIXEXYPDRIMNTYSVVPSPKVSDTVXEPYNATL 651
++ Y + ++V P+P++S V EPYN+ L
Sbjct: 63 FHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAVYPAPQISTAVVEPYNSIL 114
>SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44)
Length = 474
Score = 74.9 bits (176), Expect = 5e-14
Identities = 51/193 (26%), Positives = 85/193 (44%), Gaps = 9/193 (4%)
Frame = +1
Query: 100 IVHIQAGQCGNQIGAKFWEIISDE------HGIDPTGAYHGDSDLQLERINVYYNEASGG 261
IV +Q GQCGNQIG + +++I ++ + ++ + E + ++ +
Sbjct: 3 IVTLQLGQCGNQIGRELFDLIVEDATKLNSRFLCKELTTRSCTEYEEESLARFFTRENDD 62
Query: 262 KYVPRAILVDLEPGTMDSVRS--GPFGQIFRPDNFVFGQS-GAGNNWAKGHYTEGAELVD 432
RA+ +D+E + S G P F Q G+GNNWA G G + +D
Sbjct: 63 ILNARAVSIDMESKVISQTLSEASKSGTWRYPKGQQFSQKRGSGNNWAHGFSEHGPKSID 122
Query: 433 SVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIXEXYPDRIMNTYSVVPSPK 612
VLD+V++E E CD L GF + + YP+ + +VV
Sbjct: 123 KVLDLVQREVEKCDRLDGFLTLLSLAGGTGSGVGAFVTNSLRDFYPNSFI-VNNVVWPYS 181
Query: 613 VSDTVXEPYNATL 651
+ + + + YNATL
Sbjct: 182 MGEVIVQNYNATL 194
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 70.5 bits (165), Expect = 1e-12
Identities = 32/79 (40%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Frame = +1
Query: 91 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQ--LERINVYYNEASGGK 264
MRE + + GQ G QIG WE+ EHGI P G D + + N +++E GGK
Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIDGGDDSFNTFFSETGGGK 60
Query: 265 YVPRAILVDLEPGTMDSVR 321
+VPRA+ VDLEP + ++
Sbjct: 61 HVPRAVFVDLEPSVVGRMK 79
>SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 375
Score = 67.3 bits (157), Expect = 1e-11
Identities = 31/68 (45%), Positives = 39/68 (57%)
Frame = +1
Query: 448 VRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIXEXYPDRIMNTYSVVPSPKVSDTV 627
+RKEAE CD +QGFQ + E YPDRI+++ SV PSP+VS+ V
Sbjct: 1 MRKEAEDCDAIQGFQLLHSLGGGTGSGLGTLILYHLQEEYPDRILSSVSVFPSPRVSEIV 60
Query: 628 XEPYNATL 651
EPYNA L
Sbjct: 61 VEPYNAAL 68
>SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 50
Score = 59.7 bits (138), Expect = 2e-09
Identities = 24/47 (51%), Positives = 34/47 (72%)
Frame = +1
Query: 316 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 456
VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRK 49
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 52.8 bits (121), Expect = 2e-07
Identities = 21/47 (44%), Positives = 30/47 (63%)
Frame = +1
Query: 316 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 456
VR G + +F PD + G+ A NN+A+GHYT G E +D L+ +RK
Sbjct: 3 VRMGTYRDLFHPDQLITGKEDAANNYARGHYTVGKEHIDLTLEKIRK 49
>SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18)
Length = 553
Score = 50.4 bits (115), Expect = 1e-06
Identities = 51/189 (26%), Positives = 74/189 (39%), Gaps = 8/189 (4%)
Frame = +1
Query: 109 IQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILV 288
+ GQCGNQIG + ++ + P H D L R + V
Sbjct: 6 LPVGQCGNQIGHELMTLVEKQCEGKPLS--HRDGKL-------------------RCVCV 44
Query: 289 DLEPGTMDSVR--SGPFGQIFRPDNFVFGQSGAGNNWAKGHYTE-----GAELVDSVLDV 447
D E + S R G GQ R N + G+ G GNN+A G++ G L+ +D
Sbjct: 45 DSESKVIASNRRSDGVHGQN-RDSNIIAGRRGRGNNFALGYHGNSIDEGGTSLLHMTMDA 103
Query: 448 VRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIXEXYPDRIMNTYSVVPSPKVS-DT 624
+RKE E CD G + + YP + + SV SP VS ++
Sbjct: 104 MRKEVERCDSFAGTIVMHSLTGGTGSGLGARLVETLSDAYP--LAHVMSVAVSPHVSGES 161
Query: 625 VXEPYNATL 651
+ YN+ L
Sbjct: 162 PLQHYNSLL 170
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 46.4 bits (105), Expect = 2e-05
Identities = 31/127 (24%), Positives = 51/127 (40%), Gaps = 1/127 (0%)
Frame = +1
Query: 274 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVR 453
RA+L+D+E G ++++ GP +F + SG GNNW + + + VV+
Sbjct: 76 RAVLIDMEEGVVNNILKGPLHDVFDCQQLITDVSGCGNNWYT-LLCKCFAIRKDIFVVVQ 134
Query: 454 KEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXK-IXEXYPDRIMNTYSVVPSPKVSDTVX 630
E C + + + + YPD T +V PS D +
Sbjct: 135 SFKEWTLCFEAKEMYLEDQNKGTGSGVGTYVLNLLHDDYPDVYRFTTAVYPSAD-DDVIT 193
Query: 631 EPYNATL 651
PYN+ L
Sbjct: 194 SPYNSVL 200
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 46.0 bits (104), Expect = 3e-05
Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Frame = +1
Query: 91 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLER----INVYYNEASG 258
MRE + I GQ G QIG WE+ EHGI P G H SD +R + +++E +
Sbjct: 196 MRECLSIHVGQAGVQIGNACWELYCLEHGIQPDG--HMPSDQSADRCDDSFSTFFSETAS 253
Query: 259 GKY 267
GK+
Sbjct: 254 GKH 256
Score = 38.3 bits (85), Expect = 0.005
Identities = 19/66 (28%), Positives = 28/66 (42%)
Frame = +1
Query: 454 KEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIXEXYPDRIMNTYSVVPSPKVSDTVXE 633
K A+ C LQGF ++ Y R ++V P+P++S V E
Sbjct: 255 KHADQCTGLQGFLVFHSFGGGTGSGFSSLLMERLSVDYGKRSKLEFAVYPAPQISTAVVE 314
Query: 634 PYNATL 651
PYN+ L
Sbjct: 315 PYNSIL 320
>SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 44.8 bits (101), Expect = 6e-05
Identities = 18/35 (51%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Frame = +1
Query: 148 FWEIISDEHGIDPTGAYHG-DSDLQLERINVYYNE 249
FWE+I++EHGIDP G S +Q +R+NVY++E
Sbjct: 1 FWEVIAEEHGIDPDGQCTAVQSKIQTDRLNVYFDE 35
>SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25)
Length = 139
Score = 34.7 bits (76), Expect = 0.067
Identities = 16/64 (25%), Positives = 27/64 (42%)
Frame = +1
Query: 460 AESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIXEXYPDRIMNTYSVVPSPKVSDTVXEPY 639
A+ C LQGF ++ Y + +++ P+P++S V EPY
Sbjct: 1 ADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPY 60
Query: 640 NATL 651
N+ L
Sbjct: 61 NSIL 64
>SB_49423| Best HMM Match : Dicty_CAD (HMM E-Value=6.4)
Length = 384
Score = 33.1 bits (72), Expect = 0.20
Identities = 21/64 (32%), Positives = 33/64 (51%)
Frame = -3
Query: 486 SLEAITRFRFLSNDV*N*IDELSTLRVVSLGPVVAGAGLSEDEVVRTEDLSERSRADRVH 307
S++A R R +S V I +L V++L PV+ G +++D V + RSR R H
Sbjct: 204 SVDATLRGRDISAGVYQEIRDLGGAGVIALKPVMRGPDINDDGSVCQKRRPNRSRCPRRH 263
Query: 306 GAGL 295
G+
Sbjct: 264 RCGI 267
>SB_8591| Best HMM Match : DUF601 (HMM E-Value=0.23)
Length = 3368
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = -1
Query: 467 DSASFRTTSKTESTSSAPSV*CPLAQL 387
DSASFR +S + ++ SV CPL QL
Sbjct: 2663 DSASFRNSSNDKESADPSSVRCPLLQL 2689
>SB_4335| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 948
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = -1
Query: 335 PKGPERTESMVPGSKSTRMARGTYLP--PEA 249
PKGPER E+ + R +G YLP PEA
Sbjct: 838 PKGPERKEACLRALGDIRAEKGVYLPSNPEA 868
>SB_46898| Best HMM Match : Amelogenin (HMM E-Value=4.2)
Length = 210
Score = 29.5 bits (63), Expect = 2.5
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -1
Query: 404 CPLAQLLPAPDCPKTKLSGRKICP 333
CPL ++L P CP K+ +CP
Sbjct: 18 CPLKEMLDTPLCPLKKMLNTPLCP 41
Score = 29.1 bits (62), Expect = 3.3
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 404 CPLAQLLPAPDCPKTKLSGRKICP 333
CPL ++L AP CP ++ +CP
Sbjct: 172 CPLKEMLDAPLCPLKEMLDTPLCP 195
Score = 27.9 bits (59), Expect = 7.6
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -1
Query: 404 CPLAQLLPAPDCPKTKLSGRKICP 333
CPL ++L P CP ++ +CP
Sbjct: 62 CPLKEMLDTPLCPLKEMLNTPLCP 85
>SB_52687| Best HMM Match : Myb_DNA-binding (HMM E-Value=2.7e-09)
Length = 166
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +3
Query: 462 GIV*LPPGIPTDTLARRRHRFRYGHPPH 545
G+V LPPG+ T H RYGHP H
Sbjct: 7 GMVTLPPGMVTLPPGMVTHFTRYGHPFH 34
>SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 330
Score = 29.1 bits (62), Expect = 3.3
Identities = 19/59 (32%), Positives = 24/59 (40%), Gaps = 4/59 (6%)
Frame = -1
Query: 383 PAPDCPKTKLSGRKICPKGPERTESMVPGS----KSTRMARGTYLPPEASL*YTLMRSN 219
P P P T + P GP+ PG TR+ GT PP A ++RSN
Sbjct: 102 PPPTMPPTPPPPQTPAPPGPDTPAPPAPGGCGAKPHTRIVGGTKAPPGAWPWQAMLRSN 160
>SB_50693| Best HMM Match : C2 (HMM E-Value=0)
Length = 1049
Score = 28.7 bits (61), Expect = 4.4
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = -1
Query: 380 APDCPKTKLSGRKICPKGPERTESMVPGSKST 285
A DCP ++ +GR +CP P +S + +K++
Sbjct: 138 AVDCPTSRKNGRGLCPFPPPPLQSALKRAKAS 169
>SB_25442| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1010
Score = 28.3 bits (60), Expect = 5.8
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = -1
Query: 416 PSV*CPLAQLLPAPD-CPKTKLSGRKICPKGPERTESMVPGSKSTRMARGTYLPPEA 249
P + P+ Q D CP+ + RK P G + + G+ S +++G +PP A
Sbjct: 440 PGMTHPMGQPTAMGDLCPQGNMDYRKAAPDGRDMQQMGQKGNFSQMLSQGRGMPPGA 496
>SB_53927| Best HMM Match : Adeno_E3_CR1 (HMM E-Value=1.8)
Length = 582
Score = 27.9 bits (59), Expect = 7.6
Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 3/72 (4%)
Frame = +1
Query: 91 MREIVHIQAGQCGNQIGAKFWEIISDE---HGIDPTGAYHGDSDLQLERINVYYNEASGG 261
+RE++ +Q G N +G +W I G P + D L E + V E
Sbjct: 27 VREVITLQFGHYANFVGTHWWNIQESSFCYDGASPKSEINHDC-LFREGLTVTGQET--- 82
Query: 262 KYVPRAILVDLE 297
Y PR +L DL+
Sbjct: 83 -YTPRLLLYDLK 93
>SB_1799| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 907
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/47 (29%), Positives = 19/47 (40%)
Frame = +1
Query: 160 ISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEP 300
+ D G GD L L + +Y E G + V R + LEP
Sbjct: 792 VDDVRGCFQEALKEGDGQLTLNSLIEHYKELEGSEKVARELFAMLEP 838
>SB_48387| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 941
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/56 (26%), Positives = 27/56 (48%)
Frame = -3
Query: 480 EAITRFRFLSNDV*N*IDELSTLRVVSLGPVVAGAGLSEDEVVRTEDLSERSRADR 313
E T R S ++ ++ELS ++ + + A G S DE+ R D + + +R
Sbjct: 589 EEATTLRVQSQELRASLEELSQVKTKEINTLRAELGKSRDEIARKNDREKNALRER 644
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,246,784
Number of Sequences: 59808
Number of extensions: 387599
Number of successful extensions: 1083
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 937
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1044
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1669334250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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