Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_D19
         (576 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    23   1.9  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    22   4.3  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    21   5.7  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    21   5.7  

>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -3

Query: 154 VQRIYFTFPPSSVISALSEI 95
           +  I FTFPPS  +S + ++
Sbjct: 528 IDEISFTFPPSPPLSQIHDL 547


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 9/22 (40%), Positives = 13/22 (59%), Gaps = 1/22 (4%)
 Frame = +1

Query: 364 KTVNCPICNXSFENTE-IEEHV 426
           K   CPICN  F  ++ + +HV
Sbjct: 373 KRFACPICNKRFMRSDHLAKHV 394


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 13/45 (28%), Positives = 19/45 (42%)
 Frame = -1

Query: 471 FRIRFFTRIEKKTFVYMFLNFGIFKTXITYRTIHSLCTIXHIFIF 337
           F + F+  I   TF Y F    I  T      IH+   +  +F+F
Sbjct: 235 FGVSFYFFIS--TFFYFFTTGNIIATYDKQFYIHNALIVRALFLF 277


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 13/45 (28%), Positives = 19/45 (42%)
 Frame = -1

Query: 471 FRIRFFTRIEKKTFVYMFLNFGIFKTXITYRTIHSLCTIXHIFIF 337
           F + F+  I   TF Y F    I  T      IH+   +  +F+F
Sbjct: 231 FGVSFYFFIS--TFFYFFTTGNIIATYDKQFYIHNALIVRALFLF 273


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,492
Number of Sequences: 336
Number of extensions: 2835
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14308417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)