Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_D19
(576 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_25066| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.51
SB_5803| Best HMM Match : S-antigen (HMM E-Value=7.5) 31 0.51
SB_9476| Best HMM Match : RuvB_N (HMM E-Value=0.35) 31 0.67
SB_24062| Best HMM Match : Drf_FH1 (HMM E-Value=0.45) 31 0.89
SB_21610| Best HMM Match : HSF_DNA-bind (HMM E-Value=0.32) 30 1.2
SB_17138| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_8375| Best HMM Match : NUC153 (HMM E-Value=2.9) 29 2.1
SB_6686| Best HMM Match : Kazal_1 (HMM E-Value=0) 29 2.1
SB_47583| Best HMM Match : SAP (HMM E-Value=8.9e-08) 29 2.7
SB_32949| Best HMM Match : SAP (HMM E-Value=1) 29 2.7
SB_45482| Best HMM Match : BTB (HMM E-Value=5.6e-11) 29 3.6
SB_14155| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_41710| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.8
SB_28040| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_12713| Best HMM Match : TP2 (HMM E-Value=2.9) 28 6.3
SB_3583| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_51631| Best HMM Match : HSCB_C (HMM E-Value=2.3) 27 8.3
SB_50659| Best HMM Match : PCMT (HMM E-Value=1.8) 27 8.3
SB_41446| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.3
SB_41210| Best HMM Match : MAAL_N (HMM E-Value=0.7) 27 8.3
SB_19934| Best HMM Match : Neur_chan_memb (HMM E-Value=2.7e-16) 27 8.3
SB_18088| Best HMM Match : zf-C4 (HMM E-Value=7.56701e-44) 27 8.3
SB_6514| Best HMM Match : hATC (HMM E-Value=0.024) 27 8.3
SB_48175| Best HMM Match : hATC (HMM E-Value=0.024) 27 8.3
SB_43395| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.3
>SB_25066| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1167
Score = 31.5 bits (68), Expect = 0.51
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +1
Query: 340 DKNMXDCTKTVNCPICNXSFENTEIEEHVNKC-LFLNSCEKSNSKRQGQQLLSPNEKR 510
+K + TV CPIC F ++IEEH C +L +K + + + PN+ +
Sbjct: 339 EKEQPSTSGTVQCPICLQLFCYSDIEEHAAGCSSWLVDSDKPQDLQDDECVEVPNQNQ 396
>SB_5803| Best HMM Match : S-antigen (HMM E-Value=7.5)
Length = 218
Score = 31.5 bits (68), Expect = 0.51
Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 4/30 (13%)
Frame = +1
Query: 367 TVNCPICNXSFE----NTEIEEHVNKCLFL 444
T+ CPICN +FE N I +H++ CL +
Sbjct: 189 TMACPICNKAFEKGVGNAIINQHIDNCLIV 218
>SB_9476| Best HMM Match : RuvB_N (HMM E-Value=0.35)
Length = 848
Score = 31.1 bits (67), Expect = 0.67
Identities = 17/69 (24%), Positives = 25/69 (36%)
Frame = +1
Query: 364 KTVNCPICNXSFENTEIEEHVNKCLFLNSCEKSNSKRQGQQLLSPNEKRKKVEKLTALPP 543
+ CP+C SF +I HV C L + E +R Q K+++ P
Sbjct: 145 RRAECPVCGKSFSPKQINSHVEDC--LKATENGEEERTLQDSKGGTPSGDNTSKVSSEVP 202
Query: 544 NLKSSQSQK 570
Q K
Sbjct: 203 WFNQRQKPK 211
>SB_24062| Best HMM Match : Drf_FH1 (HMM E-Value=0.45)
Length = 1032
Score = 30.7 bits (66), Expect = 0.89
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +1
Query: 376 CPICNXSFENTEIEEHVNKCLFLNSCEKSNS-KRQGQQLLS 495
CP CN +++ E+ H KC F + K+ S K Q + LLS
Sbjct: 576 CPSCNGFYKSNELYRH--KCAFKSDNTKTKSMKMQSRMLLS 614
>SB_21610| Best HMM Match : HSF_DNA-bind (HMM E-Value=0.32)
Length = 425
Score = 30.3 bits (65), Expect = 1.2
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = +1
Query: 370 VNCPICNXSFENTEIEEHVNKCL 438
+ CP+C+ F + +IEEH+ C+
Sbjct: 401 IKCPVCDEIFPHDQIEEHLVDCV 423
>SB_17138| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 490
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +1
Query: 370 VNCPICNXSFENTEIEEHVNKCLFLNSC 453
V CPIC F + IEEH ++C C
Sbjct: 412 VECPICGQLFLDYLIEEHASRCTDFAPC 439
>SB_8375| Best HMM Match : NUC153 (HMM E-Value=2.9)
Length = 433
Score = 29.5 bits (63), Expect = 2.1
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +1
Query: 361 TKTVNCPICNXSFENTEIEEHVN 429
T+TVNCPIC+ + I H++
Sbjct: 75 TRTVNCPICSSRVQMASINTHLD 97
>SB_6686| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 2411
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +1
Query: 358 CTKTVNCPICNXSFENTEIEEHVNKCLF-LNSCE 456
C+ + CP+ T++E H+N CL L SC+
Sbjct: 1536 CSCSSRCPLVYKPVCGTDMETHINACLLKLKSCQ 1569
>SB_47583| Best HMM Match : SAP (HMM E-Value=8.9e-08)
Length = 407
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/59 (23%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Frame = +1
Query: 376 CPICNXSFENTEIEEHVNKCLFLN----SCEKSNS-KRQGQQLLSPNEKRKKVEKLTAL 537
CP+C +++ H++ CL N + SNS +++ Q++++ K K V++ +++
Sbjct: 65 CPVCGELILQSKVNSHLDLCLTRNEKKEALRSSNSPQKKEQKMVTEEGKTKSVKQQSSM 123
>SB_32949| Best HMM Match : SAP (HMM E-Value=1)
Length = 269
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/59 (23%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Frame = +1
Query: 376 CPICNXSFENTEIEEHVNKCLFLN----SCEKSNS-KRQGQQLLSPNEKRKKVEKLTAL 537
CP+C +++ H++ CL N + SNS +++ Q++++ K K V++ +++
Sbjct: 143 CPVCGELILQSKVNSHLDLCLTRNEKKEALRSSNSPQKKEQKMVTEEGKTKSVKQQSSM 201
>SB_45482| Best HMM Match : BTB (HMM E-Value=5.6e-11)
Length = 3037
Score = 28.7 bits (61), Expect = 3.6
Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +1
Query: 370 VNCPICNXSFENTEI-EEHVNKCLFLNSCEKSNSKRQGQQLLSPNEKRKKVEK 525
++CPIC F+ T+ HV KC N+ +N + + +E+ +++EK
Sbjct: 372 ISCPICGLVFKTTKSRNSHVKKCAQKNNI-PANQVIEIMHRVQQDEQAEELEK 423
>SB_14155| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 495
Score = 28.7 bits (61), Expect = 3.6
Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +1
Query: 370 VNCPICNXSFENTEI-EEHVNKCLFLNSCEKSNSKRQGQQLLSPNEKRKKVEK 525
++CPIC F+ T+ HV KC N+ +N + + +E+ +++EK
Sbjct: 372 ISCPICGLVFKTTKSRNSHVKKCAQKNNI-PANQVIEIMHRVQQDEQAEELEK 423
>SB_41710| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 336
Score = 28.3 bits (60), Expect = 4.8
Identities = 14/62 (22%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = +1
Query: 346 NMXDCTKTVN-CPICNXSFENTEIEEHVNKCLFLNSCEKSNSKRQGQQLLSPNEKRKKVE 522
++ CT+ CPIC + + +EH+++ SCE + + L+ +E
Sbjct: 19 HIAHCTRNTEICPICGEFYPKSSSKEHIDEYHKEISCELCGDVVESKAKLTEHESHCSKR 78
Query: 523 KL 528
K+
Sbjct: 79 KI 80
>SB_28040| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 391
Score = 27.9 bits (59), Expect = 6.3
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = -2
Query: 389 LHIGQFTVFVQSXIFLSFQFYEPGEETFKPSL--IFSYFV 276
+H+ F V Q +F +F F+ P P+L I S+FV
Sbjct: 349 VHVDNFHVISQELVFDAFLFFSPAARPKNPALPSIRSFFV 388
>SB_12713| Best HMM Match : TP2 (HMM E-Value=2.9)
Length = 349
Score = 27.9 bits (59), Expect = 6.3
Identities = 8/23 (34%), Positives = 12/23 (52%)
Frame = +1
Query: 370 VNCPICNXSFENTEIEEHVNKCL 438
V CP+C + EH++ CL
Sbjct: 326 VTCPVCQKEMPEAMVNEHLDSCL 348
>SB_3583| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 880
Score = 27.9 bits (59), Expect = 6.3
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +1
Query: 340 DKNMXDCTKTVNCPICNXSFENTEIEEHVNKCLFLNSCEKSNS 468
DKN + V IC+ S ++ + +N+CL ++ K+NS
Sbjct: 217 DKNWSIIQRLVKIDICSKSVNADDLAQVLNQCLSVDYGVKANS 259
>SB_51631| Best HMM Match : HSCB_C (HMM E-Value=2.3)
Length = 118
Score = 27.5 bits (58), Expect = 8.3
Identities = 17/62 (27%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Frame = +1
Query: 394 SFENTE-IEEHVN-KCLFLNSCEKSNSKRQGQQLLSPNEKRKKVEKLTALPPNLKSSQSQ 567
S ENTE ++ V+ K ++NS E+ +K + + + + +KK+ K+ +L + S
Sbjct: 31 SEENTEKLDRTVHAKDQYINSLEEELAKMKEETAILNQQYQKKIRKMRSLTSKSRQDSSL 90
Query: 568 KI 573
K+
Sbjct: 91 KL 92
>SB_50659| Best HMM Match : PCMT (HMM E-Value=1.8)
Length = 398
Score = 27.5 bits (58), Expect = 8.3
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +1
Query: 340 DKNMXDCTKTVNCPICNXSFENTEIEEHVNKCLFLNSCEKSNS 468
D+N + V IC+ S ++ + +N+CL ++ KSNS
Sbjct: 192 DENWSIIQRLVKTDICSKSVNADDLAQVLNQCLSVDYGVKSNS 234
>SB_41446| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 337
Score = 27.5 bits (58), Expect = 8.3
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +1
Query: 376 CPICNXSFENTEIEEHVNKC 435
C IC SF + E+H+N+C
Sbjct: 302 CEICGNSFLKSCFEDHINQC 321
>SB_41210| Best HMM Match : MAAL_N (HMM E-Value=0.7)
Length = 536
Score = 27.5 bits (58), Expect = 8.3
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +1
Query: 340 DKNMXDCTKTVNCPICNXSFENTEIEEHVNKCLFLNSCEKSNS 468
D+N + V IC+ S ++ + +N+CL ++ KSNS
Sbjct: 218 DENWSIIKRLVKIDICSKSVNADDLAQVLNQCLSVDYGVKSNS 260
>SB_19934| Best HMM Match : Neur_chan_memb (HMM E-Value=2.7e-16)
Length = 314
Score = 27.5 bits (58), Expect = 8.3
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -1
Query: 84 NNSPDKTRQNPKKLKLTKFTQLRXSHSP 1
NN P K ++NP+ ++T T+L SP
Sbjct: 229 NNKPRKAKENPRSGQVTPETELTDYESP 256
>SB_18088| Best HMM Match : zf-C4 (HMM E-Value=7.56701e-44)
Length = 1220
Score = 27.5 bits (58), Expect = 8.3
Identities = 12/44 (27%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Frame = +1
Query: 400 ENTEIEEHV-NKCLF--LNSCEKSNSKRQGQQLLSPNEKRKKVE 522
++ +I +H N+C + C KS +QG L +K++K++
Sbjct: 863 QDCDINQHTRNRCQYCRFEKCVKSGMLKQGMSFLDHRQKKQKLQ 906
>SB_6514| Best HMM Match : hATC (HMM E-Value=0.024)
Length = 620
Score = 27.5 bits (58), Expect = 8.3
Identities = 12/43 (27%), Positives = 24/43 (55%)
Frame = +1
Query: 340 DKNMXDCTKTVNCPICNXSFENTEIEEHVNKCLFLNSCEKSNS 468
D+N + V IC+ S ++ + +N+CL +++ K+NS
Sbjct: 218 DENWSIIQRLVKIDICSKSVNADDLAQVLNQCLSVDNGVKANS 260
>SB_48175| Best HMM Match : hATC (HMM E-Value=0.024)
Length = 620
Score = 27.5 bits (58), Expect = 8.3
Identities = 12/43 (27%), Positives = 24/43 (55%)
Frame = +1
Query: 340 DKNMXDCTKTVNCPICNXSFENTEIEEHVNKCLFLNSCEKSNS 468
D+N + V IC+ S ++ + +N+CL +++ K+NS
Sbjct: 218 DENWSIIQRLVKIDICSKSVNADDLAQVLNQCLSVDNGVKANS 260
>SB_43395| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1112
Score = 27.5 bits (58), Expect = 8.3
Identities = 9/33 (27%), Positives = 22/33 (66%)
Frame = +1
Query: 400 ENTEIEEHVNKCLFLNSCEKSNSKRQGQQLLSP 498
+NT I+E+ + + +++C+ S+ +R+ +L P
Sbjct: 1069 KNTSIKENTRRIVSVDNCQTSSERREYMRLFPP 1101
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,759,452
Number of Sequences: 59808
Number of extensions: 302381
Number of successful extensions: 827
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 788
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 825
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1373676929
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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