Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_D19
(576 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC029360-1|AAH29360.1| 230|Homo sapiens SUV39H2 protein protein. 33 0.95
AL360083-13|CAI40030.1| 175|Homo sapiens suppressor of variegat... 33 0.95
AL360083-12|CAI40028.1| 410|Homo sapiens suppressor of variegat... 33 0.95
AL360083-11|CAI40029.1| 230|Homo sapiens suppressor of variegat... 33 0.95
BC068478-1|AAH68478.1| 489|Homo sapiens chromosome 1 open readi... 32 1.3
BC018923-1|AAH18923.1| 640|Homo sapiens Werner helicase interac... 32 1.3
AL139092-3|CAH73664.1| 665|Homo sapiens Werner helicase interac... 32 1.3
AL139092-2|CAH73663.1| 640|Homo sapiens Werner helicase interac... 32 1.3
AL117352-7|CAB81621.1| 489|Homo sapiens chromosome 1 open readi... 32 1.3
AK223593-1|BAD97313.1| 665|Homo sapiens Werner helicase interac... 32 1.3
AK027613-1|BAB55232.1| 489|Homo sapiens protein ( Homo sapiens ... 32 1.3
AB209723-1|BAD92960.1| 646|Homo sapiens Werner helicase interac... 32 1.3
AB056152-1|BAB60709.1| 665|Homo sapiens Werner helicase interac... 32 1.3
AK124118-1|BAC85777.1| 157|Homo sapiens protein ( Homo sapiens ... 30 6.7
BC032561-1|AAH32561.1| 553|Homo sapiens UIMC1 protein protein. 29 8.9
BC001302-1|AAH01302.1| 495|Homo sapiens RAD18 homolog (S. cerev... 29 8.9
AY961989-1|AAX44049.1| 495|Homo sapiens RAD18 homolog (S. cerev... 29 8.9
AY004333-1|AAF86618.1| 495|Homo sapiens RAD18 protein. 29 8.9
AK222771-1|BAD96491.1| 495|Homo sapiens postreplication repair ... 29 8.9
AK023075-1|BAB14392.1| 495|Homo sapiens protein ( Homo sapiens ... 29 8.9
AF284753-1|AAG59855.1| 349|Homo sapiens X2HRIP110 protein. 29 8.9
AF284749-1|AAG59851.1| 641|Homo sapiens XHRIP110 protein. 29 8.9
AF169796-1|AAF80856.1| 484|Homo sapiens zinc finger DNA binding... 29 8.9
AF113538-1|AAF14875.1| 349|Homo sapiens retinoid x receptor int... 29 8.9
AB035274-1|BAA99284.1| 495|Homo sapiens postreplication repair ... 29 8.9
>BC029360-1|AAH29360.1| 230|Homo sapiens SUV39H2 protein protein.
Length = 230
Score = 32.7 bits (71), Expect = 0.95
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = -2
Query: 485 CCPCLFELDFSQELRKRHLFTCSSISV 405
C PCL LD QEL ++ TC SI +
Sbjct: 13 CVPCLVSLDTLQELCRKEKLTCKSIGI 39
>AL360083-13|CAI40030.1| 175|Homo sapiens suppressor of variegation
3-9 homolog 2 (Drosophila) protein.
Length = 175
Score = 32.7 bits (71), Expect = 0.95
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = -2
Query: 485 CCPCLFELDFSQELRKRHLFTCSSISV 405
C PCL LD QEL ++ TC SI +
Sbjct: 2 CVPCLVSLDTLQELCRKEKLTCKSIGI 28
>AL360083-12|CAI40028.1| 410|Homo sapiens suppressor of variegation
3-9 homolog 2 (Drosophila) protein.
Length = 410
Score = 32.7 bits (71), Expect = 0.95
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = -2
Query: 485 CCPCLFELDFSQELRKRHLFTCSSISV 405
C PCL LD QEL ++ TC SI +
Sbjct: 13 CVPCLVSLDTLQELCRKEKLTCKSIGI 39
>AL360083-11|CAI40029.1| 230|Homo sapiens suppressor of variegation
3-9 homolog 2 (Drosophila) protein.
Length = 230
Score = 32.7 bits (71), Expect = 0.95
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = -2
Query: 485 CCPCLFELDFSQELRKRHLFTCSSISV 405
C PCL LD QEL ++ TC SI +
Sbjct: 13 CVPCLVSLDTLQELCRKEKLTCKSIGI 39
>BC068478-1|AAH68478.1| 489|Homo sapiens chromosome 1 open reading
frame 124 protein.
Length = 489
Score = 32.3 bits (70), Expect = 1.3
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +1
Query: 361 TKTVNCPICNXSFENTEIEEHVNKCL 438
+K VNCP+C ++I EH++ CL
Sbjct: 451 SKMVNCPVCQNEVLESQINEHLDWCL 476
>BC018923-1|AAH18923.1| 640|Homo sapiens Werner helicase
interacting protein 1 protein.
Length = 640
Score = 32.3 bits (70), Expect = 1.3
Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 7/63 (11%)
Frame = +1
Query: 370 VNCPICNXSFENTEIEEHVNKCLFLNSC----EKSNSKRQGQQLLSPN---EKRKKVEKL 528
V CP+C I H+++CL L+ + S R G++ P+ KR+++ +
Sbjct: 18 VQCPVCQQMMPAAHINSHLDRCLLLHPAGHAEPAAGSHRAGERAKGPSPPGAKRRRLSES 77
Query: 529 TAL 537
+AL
Sbjct: 78 SAL 80
>AL139092-3|CAH73664.1| 665|Homo sapiens Werner helicase
interacting protein 1 protein.
Length = 665
Score = 32.3 bits (70), Expect = 1.3
Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 7/63 (11%)
Frame = +1
Query: 370 VNCPICNXSFENTEIEEHVNKCLFLNSC----EKSNSKRQGQQLLSPN---EKRKKVEKL 528
V CP+C I H+++CL L+ + S R G++ P+ KR+++ +
Sbjct: 18 VQCPVCQQMMPAAHINSHLDRCLLLHPAGHAEPAAGSHRAGERAKGPSPPGAKRRRLSES 77
Query: 529 TAL 537
+AL
Sbjct: 78 SAL 80
>AL139092-2|CAH73663.1| 640|Homo sapiens Werner helicase
interacting protein 1 protein.
Length = 640
Score = 32.3 bits (70), Expect = 1.3
Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 7/63 (11%)
Frame = +1
Query: 370 VNCPICNXSFENTEIEEHVNKCLFLNSC----EKSNSKRQGQQLLSPN---EKRKKVEKL 528
V CP+C I H+++CL L+ + S R G++ P+ KR+++ +
Sbjct: 18 VQCPVCQQMMPAAHINSHLDRCLLLHPAGHAEPAAGSHRAGERAKGPSPPGAKRRRLSES 77
Query: 529 TAL 537
+AL
Sbjct: 78 SAL 80
>AL117352-7|CAB81621.1| 489|Homo sapiens chromosome 1 open reading
frame 124 protein.
Length = 489
Score = 32.3 bits (70), Expect = 1.3
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +1
Query: 361 TKTVNCPICNXSFENTEIEEHVNKCL 438
+K VNCP+C ++I EH++ CL
Sbjct: 451 SKMVNCPVCQNEVLESQINEHLDWCL 476
>AK223593-1|BAD97313.1| 665|Homo sapiens Werner helicase
interacting protein isoform 1 variant protein.
Length = 665
Score = 32.3 bits (70), Expect = 1.3
Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 7/63 (11%)
Frame = +1
Query: 370 VNCPICNXSFENTEIEEHVNKCLFLNSC----EKSNSKRQGQQLLSPN---EKRKKVEKL 528
V CP+C I H+++CL L+ + S R G++ P+ KR+++ +
Sbjct: 18 VQCPVCQQMMPAAHINSHLDRCLLLHPAGHAEPAAGSHRAGERAKGPSPPGAKRRRLSES 77
Query: 529 TAL 537
+AL
Sbjct: 78 SAL 80
>AK027613-1|BAB55232.1| 489|Homo sapiens protein ( Homo sapiens
cDNA FLJ14707 fis, clone NT2RP3000599. ).
Length = 489
Score = 32.3 bits (70), Expect = 1.3
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +1
Query: 361 TKTVNCPICNXSFENTEIEEHVNKCL 438
+K VNCP+C ++I EH++ CL
Sbjct: 451 SKMVNCPVCQNEVLESQINEHLDWCL 476
>AB209723-1|BAD92960.1| 646|Homo sapiens Werner helicase
interacting protein isoform 1 variant protein.
Length = 646
Score = 32.3 bits (70), Expect = 1.3
Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 7/63 (11%)
Frame = +1
Query: 370 VNCPICNXSFENTEIEEHVNKCLFLNSC----EKSNSKRQGQQLLSPN---EKRKKVEKL 528
V CP+C I H+++CL L+ + S R G++ P+ KR+++ +
Sbjct: 3 VQCPVCQQMMPAAHINSHLDRCLLLHPAGHAEPAAGSHRAGERAKGPSPPGAKRRRLSES 62
Query: 529 TAL 537
+AL
Sbjct: 63 SAL 65
>AB056152-1|BAB60709.1| 665|Homo sapiens Werner helicase
interacting protein protein.
Length = 665
Score = 32.3 bits (70), Expect = 1.3
Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 7/63 (11%)
Frame = +1
Query: 370 VNCPICNXSFENTEIEEHVNKCLFLNSC----EKSNSKRQGQQLLSPN---EKRKKVEKL 528
V CP+C I H+++CL L+ + S R G++ P+ KR+++ +
Sbjct: 18 VQCPVCQQMMPAAHINSHLDRCLLLHPAGHAEPAAGSHRAGERAKGPSPPGAKRRRLSES 77
Query: 529 TAL 537
+AL
Sbjct: 78 SAL 80
>AK124118-1|BAC85777.1| 157|Homo sapiens protein ( Homo sapiens
cDNA FLJ42124 fis, clone TESTI2009477, weakly similar
to TRICHOHYALIN. ).
Length = 157
Score = 29.9 bits (64), Expect = 6.7
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +1
Query: 454 EKSNSKRQGQQLLSPNEKRKKVEKLTALPPNLKSSQ 561
EK +++ Q + RK+ E++T LPP +K++Q
Sbjct: 95 EKQMGEQEEQMRKREEQMRKREEQITQLPPGMKNTQ 130
>BC032561-1|AAH32561.1| 553|Homo sapiens UIMC1 protein protein.
Length = 553
Score = 29.5 bits (63), Expect = 8.9
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +1
Query: 370 VNCPICNXSFENTEIEEHVNKCLFLNSCEKSNSKRQ 477
V+CP+C+ F T+IE H C L + ++RQ
Sbjct: 337 VSCPLCDQCFPPTKIERHAMYCNGLMEEDTVLTRRQ 372
>BC001302-1|AAH01302.1| 495|Homo sapiens RAD18 homolog (S.
cerevisiae) protein.
Length = 495
Score = 29.5 bits (63), Expect = 8.9
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +1
Query: 370 VNCPICNXSFENTEIEEHVNKCLFLNSCEKSNSKRQGQQLLSPNEK 507
V+CP+C + + I +H++ C L+ EK S R P K
Sbjct: 202 VDCPVCGVNIPESHINKHLDSC--LSREEKKESLRSSVHKRKPLPK 245
>AY961989-1|AAX44049.1| 495|Homo sapiens RAD18 homolog (S.
cerevisiae) protein.
Length = 495
Score = 29.5 bits (63), Expect = 8.9
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +1
Query: 370 VNCPICNXSFENTEIEEHVNKCLFLNSCEKSNSKRQGQQLLSPNEK 507
V+CP+C + + I +H++ C L+ EK S R P K
Sbjct: 202 VDCPVCGVNIPESHINKHLDSC--LSREEKKESLRSSVHKRKPLPK 245
>AY004333-1|AAF86618.1| 495|Homo sapiens RAD18 protein.
Length = 495
Score = 29.5 bits (63), Expect = 8.9
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +1
Query: 370 VNCPICNXSFENTEIEEHVNKCLFLNSCEKSNSKRQGQQLLSPNEK 507
V+CP+C + + I +H++ C L+ EK S R P K
Sbjct: 202 VDCPVCGVNIPESHINKHLDSC--LSREEKKESLRSSVHKRKPLPK 245
>AK222771-1|BAD96491.1| 495|Homo sapiens postreplication repair
protein hRAD18p variant protein.
Length = 495
Score = 29.5 bits (63), Expect = 8.9
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +1
Query: 370 VNCPICNXSFENTEIEEHVNKCLFLNSCEKSNSKRQGQQLLSPNEK 507
V+CP+C + + I +H++ C L+ EK S R P K
Sbjct: 202 VDCPVCGVNIPESHINKHLDSC--LSREEKKESLRSSVHKRKPLPK 245
>AK023075-1|BAB14392.1| 495|Homo sapiens protein ( Homo sapiens
cDNA FLJ13013 fis, clone NT2RP3000590, weakly similar to
UVS-2 PROTEIN. ).
Length = 495
Score = 29.5 bits (63), Expect = 8.9
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +1
Query: 370 VNCPICNXSFENTEIEEHVNKCLFLNSCEKSNSKRQGQQLLSPNEK 507
V+CP+C + + I +H++ C L+ EK S R P K
Sbjct: 202 VDCPVCGVNIPESHINKHLDSC--LSREEKKESLRSSVHKRKPLPK 245
>AF284753-1|AAG59855.1| 349|Homo sapiens X2HRIP110 protein.
Length = 349
Score = 29.5 bits (63), Expect = 8.9
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +1
Query: 370 VNCPICNXSFENTEIEEHVNKCLFLNSCEKSNSKRQ 477
V+CP+C+ F T+IE H C L + ++RQ
Sbjct: 133 VSCPLCDQCFPPTKIERHAMYCNGLMEEDTVLTRRQ 168
>AF284749-1|AAG59851.1| 641|Homo sapiens XHRIP110 protein.
Length = 641
Score = 29.5 bits (63), Expect = 8.9
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +1
Query: 370 VNCPICNXSFENTEIEEHVNKCLFLNSCEKSNSKRQ 477
V+CP+C+ F T+IE H C L + ++RQ
Sbjct: 425 VSCPLCDQCFPPTKIERHAMYCNGLMEEDTVLTRRQ 460
>AF169796-1|AAF80856.1| 484|Homo sapiens zinc finger DNA binding
protein protein.
Length = 484
Score = 29.5 bits (63), Expect = 8.9
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +1
Query: 370 VNCPICNXSFENTEIEEHVNKCLFLNSCEKSNSKRQGQQLLSPNEK 507
V+CP+C + + I +H++ C L+ EK S R P K
Sbjct: 202 VDCPVCGVNIPESHINKHLDSC--LSREEKKESLRSSVHKRKPLPK 245
>AF113538-1|AAF14875.1| 349|Homo sapiens retinoid x receptor
interacting protein protein.
Length = 349
Score = 29.5 bits (63), Expect = 8.9
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +1
Query: 370 VNCPICNXSFENTEIEEHVNKCLFLNSCEKSNSKRQ 477
V+CP+C+ F T+IE H C L + ++RQ
Sbjct: 133 VSCPLCDQCFPPTKIERHAMYCNGLMEEDTVLTRRQ 168
>AB035274-1|BAA99284.1| 495|Homo sapiens postreplication repair
protein hRAD18p protein.
Length = 495
Score = 29.5 bits (63), Expect = 8.9
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +1
Query: 370 VNCPICNXSFENTEIEEHVNKCLFLNSCEKSNSKRQGQQLLSPNEK 507
V+CP+C + + I +H++ C L+ EK S R P K
Sbjct: 202 VDCPVCGVNIPESHINKHLDSC--LSREEKKESLRSSVHKRKPLPK 245
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,956,229
Number of Sequences: 237096
Number of extensions: 1438986
Number of successful extensions: 6737
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 6637
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6737
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5929224630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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