Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_D18
         (511 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    23   1.2  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    23   1.6  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    23   1.6  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    23   1.6  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    23   2.1  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    22   3.7  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    22   3.7  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   6.4  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    21   6.4  

>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 10/13 (76%), Positives = 11/13 (84%)
 Frame = +2

Query: 77  ISNLCFLLFTILG 115
           IS +CFLL TILG
Sbjct: 44  ISAICFLLSTILG 56


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 11/41 (26%), Positives = 21/41 (51%)
 Frame = -1

Query: 268 VLMNLYKLVXRPLPCVITQTG*NSYNGYTDT*NSSQKVTKV 146
           +L   Y+L+   L  ++ +T   S  G+TD  N  +K  ++
Sbjct: 204 ILRVRYQLLNEYLETLVQETNRTSVEGWTDVSNVKRKSKEI 244



 Score = 21.8 bits (44), Expect = 3.7
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +3

Query: 57  LNYFQNVFPTCVSCYS 104
           L YF+ VF + +SC S
Sbjct: 88  LRYFEEVFSSLLSCCS 103


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 11/41 (26%), Positives = 21/41 (51%)
 Frame = -1

Query: 268 VLMNLYKLVXRPLPCVITQTG*NSYNGYTDT*NSSQKVTKV 146
           +L   Y+L+   L  ++ +T   S  G+TD  N  +K  ++
Sbjct: 204 ILRVRYQLLNEYLETLVQETNRTSVEGWTDVSNVKRKSKEI 244



 Score = 21.8 bits (44), Expect = 3.7
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +3

Query: 57  LNYFQNVFPTCVSCYS 104
           L YF+ VF + +SC S
Sbjct: 88  LRYFEEVFSSLLSCCS 103


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = +1

Query: 292 QVXNK*IWKKISHSIPYTCHLSKKLPSYI 378
           ++ N+ IWKK+       C L +K+   I
Sbjct: 257 KIKNEIIWKKLREDYTRQCRLVRKVDKEI 285


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
 Frame = -1

Query: 277 RWQVLMNLYKLVXRPLPCVITQTG*NSYNGYTDT*NSSQKVTKVVTCR-CFHIAYTKN 107
           ++Q L+ L K   +PL CV++    + Y   T+   SS +    +T R  FH A T++
Sbjct: 210 KFQPLLRLPKFKKKPLLCVVSTL--SCYLERTELLRSSGETRLFLTHRKPFHPASTQS 265


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +2

Query: 362 NFQAIXNKLKVLIYCFVII*M**ILTNNTFI 454
           N   + NK  + I CFV++ +  I+T  TF+
Sbjct: 81  NNSLVINKRLIFIECFVMMALTLIVTLFTFL 111


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +2

Query: 362 NFQAIXNKLKVLIYCFVII*M**ILTNNTFI 454
           N   + NK  + I CFV++ +  I+T  TF+
Sbjct: 81  NNSLVINKRLIFIECFVMMALTLIVTLFTFL 111


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 6.4
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +1

Query: 241 KRVYIGSSKLAILFQH 288
           +RV+I  SK+  L QH
Sbjct: 217 RRVFISFSKICYLHQH 232


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 21.0 bits (42), Expect = 6.4
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +1

Query: 241 KRVYIGSSKLAILFQH 288
           +RV+I  SK+  L QH
Sbjct: 235 RRVFISFSKICYLHQH 250


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,543
Number of Sequences: 336
Number of extensions: 2173
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12154132
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)