Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_D17
         (654 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    24   0.95 
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    24   0.95 
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   5.1  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   5.1  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   6.7  

>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 24.2 bits (50), Expect = 0.95
 Identities = 21/83 (25%), Positives = 40/83 (48%)
 Frame = +2

Query: 38  GLIIIYHTNF*LKCGCVADFNVCRVLVLAL*NTYLQTISFKLNIFVLNKKMQSSSPGPVI 217
           GL ++Y     +      D  V  +L L   ++ LQT++ K+N   +++K+   S G V 
Sbjct: 358 GLNVVYVVTAWICAITKRDMFVEFLLKLVDFDSKLQTMNIKVNYHRVHRKIMVQSLGRVG 417

Query: 218 DLRADVNRLVLHSNLINLEVIID 286
            L   +  L + +NL    +I++
Sbjct: 418 VLVVIIGTLAIIANLNGDTMIVE 440


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 24.2 bits (50), Expect = 0.95
 Identities = 21/83 (25%), Positives = 40/83 (48%)
 Frame = +2

Query: 38  GLIIIYHTNF*LKCGCVADFNVCRVLVLAL*NTYLQTISFKLNIFVLNKKMQSSSPGPVI 217
           GL ++Y     +      D  V  +L L   ++ LQT++ K+N   +++K+   S G V 
Sbjct: 83  GLNVVYVVTAWICAITKRDMFVEFLLKLVDFDSKLQTMNIKVNYHRVHRKIMVQSLGRVG 142

Query: 218 DLRADVNRLVLHSNLINLEVIID 286
            L   +  L + +NL    +I++
Sbjct: 143 VLVVIIGTLAIIANLNGDTMIVE 165


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -1

Query: 549  VFKLFKSKPIFXIKLFILQIN 487
            VF  F    +F + +F+LQ+N
Sbjct: 1269 VFAFFMFNALFVLVVFLLQLN 1289


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -1

Query: 549  VFKLFKSKPIFXIKLFILQIN 487
            VF  F    +F + +F+LQ+N
Sbjct: 1269 VFAFFMFNALFVLVVFLLQLN 1289


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -2

Query: 506 YSFCKLTIXRPIHVXRSAYILPLKA 432
           Y FC+  I  P H   +  + PLK+
Sbjct: 299 YYFCRAFIIFPTHFYCAFSLYPLKS 323


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,825
Number of Sequences: 336
Number of extensions: 3108
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)