Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_D17
         (654 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0922 - 7113781-7113942,7114093-7114235,7115305-7115506,711...    28   7.5  
06_01_0275 + 2029542-2029689,2029777-2030295,2030657-2030754,203...    28   7.5  
10_07_0098 - 12844631-12845074,12845329-12846570                       27   9.9  

>06_01_0922 -
           7113781-7113942,7114093-7114235,7115305-7115506,
           7115590-7115685,7117053-7117139,7117237-7117638
          Length = 363

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
 Frame = +2

Query: 176 LNKKMQSSSPGPVIDLRADVNRLVLHSNLI-NLEVIIDIEHELRKES 313
           L  KM+ SS  P++DL+ +  R +     I  +E+I+ +E + R  S
Sbjct: 179 LAAKMEESSAPPLLDLQIEGTRFIFEPRTIQRMELIVLVELDWRLRS 225


>06_01_0275 +
           2029542-2029689,2029777-2030295,2030657-2030754,
           2031718-2032028,2032560-2032631,2032729-2033398
          Length = 605

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 14/28 (50%), Positives = 16/28 (57%)
 Frame = -2

Query: 635 HSFXRIFCKVTFLQDLYVCSLCNCLFGS 552
           H F R FC V+FL +      CN LFGS
Sbjct: 317 HDFVRPFCTVSFLSE------CNILFGS 338


>10_07_0098 - 12844631-12845074,12845329-12846570
          Length = 561

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
 Frame = +2

Query: 314 GDLISLMFLL--YDDPXIALXKLTAYQQSXNAYHEHSLLQDWLL 439
           GD     FLL     P ++L K T  +   N YH++ ++QD L+
Sbjct: 354 GDQFWFRFLLGWLMPPKVSLLKATQGESIRNYYHDNHVIQDMLV 397


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,614,027
Number of Sequences: 37544
Number of extensions: 258039
Number of successful extensions: 531
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 527
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 531
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)