Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_D17
(654 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 24 1.1
AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase pro... 24 1.5
U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodops... 23 1.9
AF091732-1|AAD02869.2| 154|Apis mellifera long-wavelength rhodo... 23 1.9
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 22 4.5
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 22 6.0
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 22 6.0
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 22 6.0
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 22 6.0
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 22 6.0
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 22 6.0
AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly pro... 21 7.9
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 24.2 bits (50), Expect = 1.1
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -2
Query: 476 PIHVXRSAYILPLKANLEARNAHDMH 399
PI+V AYI +K+N+ D+H
Sbjct: 38 PINVYTKAYIYTIKSNMAKTLQFDVH 63
>AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase
protein.
Length = 580
Score = 23.8 bits (49), Expect = 1.5
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 209 PVIDLRADVNRLVLHSNLINLEVIID 286
PV AD +RLV + + L+VI+D
Sbjct: 94 PVYGTLADFDRLVRRAKSLGLKVILD 119
>U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodopsin
protein.
Length = 377
Score = 23.4 bits (48), Expect = 1.9
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +3
Query: 66 FN*NVVALQILTCVVYWFWLYKIPIF 143
FN +++ L C Y W+Y +P+F
Sbjct: 207 FNRGLLSASYLVC--YGIWVYFVPLF 230
>AF091732-1|AAD02869.2| 154|Apis mellifera long-wavelength
rhodopsin protein.
Length = 154
Score = 23.4 bits (48), Expect = 1.9
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +3
Query: 66 FN*NVVALQILTCVVYWFWLYKIPIF 143
FN +++ L C Y W+Y +P+F
Sbjct: 83 FNRGLLSASYLVC--YGIWVYFVPLF 106
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 22.2 bits (45), Expect = 4.5
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = +1
Query: 553 LPNRQLHNEHTYKSCKKVTLQNM 621
L N+ +HN + YK+ K N+
Sbjct: 318 LSNKTIHNNNNYKNYNKKLYYNI 340
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic
acetylcholine receptor alpha4subunit protein.
Length = 569
Score = 21.8 bits (44), Expect = 6.0
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 68 KNLYDKLLSNHTVII 24
K LYD LLSN+ ++
Sbjct: 30 KRLYDDLLSNYNKLV 44
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic
acetylcholine receptor alpha4subunit protein.
Length = 569
Score = 21.8 bits (44), Expect = 6.0
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 68 KNLYDKLLSNHTVII 24
K LYD LLSN+ ++
Sbjct: 30 KRLYDDLLSNYNKLV 44
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic
acetylcholine receptor alpha3subunit protein.
Length = 566
Score = 21.8 bits (44), Expect = 6.0
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 68 KNLYDKLLSNHTVII 24
K LYD LLSN+ ++
Sbjct: 26 KRLYDDLLSNYNKLV 40
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic
acetylcholine receptor alpha1subunit protein.
Length = 601
Score = 21.8 bits (44), Expect = 6.0
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -2
Query: 68 KNLYDKLLSNHTVII 24
K LYD LLSN+ +I
Sbjct: 22 KRLYDDLLSNYNRLI 36
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 21.8 bits (44), Expect = 6.0
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -2
Query: 68 KNLYDKLLSNHTVII 24
K LYD LLSN+ +I
Sbjct: 22 KRLYDDLLSNYNRLI 36
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 21.8 bits (44), Expect = 6.0
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -2
Query: 68 KNLYDKLLSNHTVII 24
K LYD LLSN+ +I
Sbjct: 35 KRLYDDLLSNYNRLI 49
>AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly
protein 8 protein.
Length = 416
Score = 21.4 bits (43), Expect = 7.9
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +1
Query: 115 GFGFIKYLSSDNFFQ 159
GF I Y +SDN FQ
Sbjct: 208 GFALIIYNNSDNSFQ 222
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,353
Number of Sequences: 438
Number of extensions: 3292
Number of successful extensions: 17
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19804986
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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