Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_D11
         (505 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_04_0385 + 17167174-17167440,17173321-17173962                       30   0.92 
02_05_0516 + 29694631-29695182                                         30   0.92 
11_06_0572 + 25083629-25083637,25084380-25084808,25085189-25086568     29   2.1  
12_02_0874 + 23915303-23915543,23915630-23915713,23915797-239163...    28   4.9  
12_02_0792 - 23191120-23191313,23191419-23191775,23192027-231921...    27   6.5  
11_01_0058 + 438000-438230,438847-438902,440003-440117,440314-44...    27   8.6  
10_05_0011 - 7822847-7822880,7823653-7823754,7823859-7824106,782...    27   8.6  
07_03_1478 - 26828500-26828583,26828854-26829335,26830265-26830337     27   8.6  
04_04_1623 - 34846056-34846223,34846547-34846644,34846738-348468...    27   8.6  
04_04_1565 - 34451411-34451875,34454077-34455249,34455340-34455402     27   8.6  
04_04_0921 - 29431812-29432786                                         27   8.6  
03_02_0581 - 9617039-9617936,9618057-9618502,9618985-9619071,961...    27   8.6  
01_06_0208 - 27540077-27540992,27541310-27541497                       27   8.6  

>09_04_0385 + 17167174-17167440,17173321-17173962
          Length = 302

 Score = 30.3 bits (65), Expect = 0.92
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = -3

Query: 263 LPSPPGSTESSGHGRRSLAAATEPRTD 183
           LP  P +T SSG+ R S +A++ PR D
Sbjct: 146 LPPEPSATTSSGNDRSSSSASSPPRAD 172


>02_05_0516 + 29694631-29695182
          Length = 183

 Score = 30.3 bits (65), Expect = 0.92
 Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
 Frame = +3

Query: 192 WFGRRSKT-PS--AVAGAFSRAWWRWQHKYVQPKKVGMA 299
           W  RRSK+ PS  A AG   + WW W   ++  KK G A
Sbjct: 67  WAFRRSKSAPSLGAFAGGPLKRWWDWGVGWLMSKKPGFA 105


>11_06_0572 + 25083629-25083637,25084380-25084808,25085189-25086568
          Length = 605

 Score = 29.1 bits (62), Expect = 2.1
 Identities = 16/57 (28%), Positives = 27/57 (47%)
 Frame = -2

Query: 279 VVRTYVAISTRLD*KLRPRQTESCCGDRTTNRFRSASTD*MEYQVFHSSVQDRKAHV 109
           ++   +A  T++  +L P   +  C D  T  FR AS D ++  +FH      K H+
Sbjct: 518 MIEQRLAYWTKVKCELPPMHHDGECPDHMTTIFRDASRDSIDRAMFHDVFLVIKTHL 574


>12_02_0874 +
           23915303-23915543,23915630-23915713,23915797-23916312,
           23916426-23916482,23916630-23916802,23916886-23917014,
           23917102-23917296,23917381-23917503,23918171-23918284
          Length = 543

 Score = 27.9 bits (59), Expect = 4.9
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = +1

Query: 187 VRGSVAAARLRLPWPELSVEPGGDGNISTYNLRRLAWLHS 306
           VR S A +R   P   + VE   DG+  T++L +L W HS
Sbjct: 34  VRASDAGSRAA-PGEVVHVEAKSDGSNVTFHLTQLQWHHS 72


>12_02_0792 -
           23191120-23191313,23191419-23191775,23192027-23192108,
           23192186-23193097,23193190-23193346,23193540-23193694,
           23194667-23194819,23195334-23195627,23195711-23195896,
           23196062-23196662,23196868-23196992,23197101-23197197,
           23197299-23197411,23198129-23198233
          Length = 1176

 Score = 27.5 bits (58), Expect = 6.5
 Identities = 17/62 (27%), Positives = 26/62 (41%)
 Frame = +3

Query: 108 VHGPYDPARYYGKPDTPFSQLKLNEIGSWFGRRSKTPSAVAGAFSRAWWRWQHKYVQPKK 287
           +HG         KPD P   L LN+ GS+    SK     +   + AWW + ++  +   
Sbjct: 633 LHGASSTIIKNHKPDNPIPPLTLNQAGSFTVCHSKAWD--SKIVTSAWWVYPYQVSKTAP 690

Query: 288 VG 293
            G
Sbjct: 691 TG 692


>11_01_0058 +
           438000-438230,438847-438902,440003-440117,440314-440424,
           442331-442518,442957-443013,443109-443268,443368-443436,
           443580-443699
          Length = 368

 Score = 27.1 bits (57), Expect = 8.6
 Identities = 15/47 (31%), Positives = 20/47 (42%)
 Frame = +3

Query: 96  YNPAVHGPYDPARYYGKPDTPFSQLKLNEIGSWFGRRSKTPSAVAGA 236
           Y P     Y P  Y+G+P  P + L+   +G        TPS V  A
Sbjct: 21  YKPTSRPHYQPPHYHGQPAAPPAPLQQQHLGP----HGVTPSTVGVA 63


>10_05_0011 -
           7822847-7822880,7823653-7823754,7823859-7824106,
           7824195-7824240,7824368-7825984,7826673-7826797,
           7826915-7829083
          Length = 1446

 Score = 27.1 bits (57), Expect = 8.6
 Identities = 12/17 (70%), Positives = 13/17 (76%)
 Frame = -3

Query: 263 LPSPPGSTESSGHGRRS 213
           LPS PGST SSG+  RS
Sbjct: 847 LPSTPGSTTSSGYPSRS 863


>07_03_1478 - 26828500-26828583,26828854-26829335,26830265-26830337
          Length = 212

 Score = 27.1 bits (57), Expect = 8.6
 Identities = 17/60 (28%), Positives = 25/60 (41%)
 Frame = +3

Query: 15  RYLLELIFRKVHRAFLKIWLSVITPRQYNPAVHGPYDPARYYGKPDTPFSQLKLNEIGSW 194
           +YL +  F  V  A    W+ V+         + P  P   +     PF+QL L  +GSW
Sbjct: 130 QYLNDTKFSGVGIANEGDWVVVVLSTSSGSGDYSPAPPGSNWAPSVHPFNQLILLLVGSW 189


>04_04_1623 -
           34846056-34846223,34846547-34846644,34846738-34846829,
           34847096-34847202,34847385-34847490,34848108-34848547
          Length = 336

 Score = 27.1 bits (57), Expect = 8.6
 Identities = 14/57 (24%), Positives = 27/57 (47%)
 Frame = -3

Query: 260 PSPPGSTESSGHGRRSLAAATEPRTDFVQLQLTEWSIRFSIVACRIVRPMYSRIILP 90
           P+PP ++   GHG  S  + ++  +D+  ++ TE    FS  +  +     S   +P
Sbjct: 56  PAPPPASLDGGHGDTSDGSGSDSDSDWEGVESTELDEDFSAASAFVAASAASGTSVP 112


>04_04_1565 - 34451411-34451875,34454077-34455249,34455340-34455402
          Length = 566

 Score = 27.1 bits (57), Expect = 8.6
 Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
 Frame = +3

Query: 141 GKPDTPFSQLKLNEIGSWFGRRS--KTPSAVAGAFSRAWW 254
           G P+   S    +     FGR S  KTP ++   F+R WW
Sbjct: 169 GTPNRSSSSCSSSPDTLGFGRSSSTKTPESMKPCFAREWW 208


>04_04_0921 - 29431812-29432786
          Length = 324

 Score = 27.1 bits (57), Expect = 8.6
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +3

Query: 51  RAFLKIWLSVITPRQYNPAVHGPYDP 128
           RA  K W S + PR   P +  PYDP
Sbjct: 30  RAVCKSWRSFLRPRSRPPWLMLPYDP 55


>03_02_0581 -
           9617039-9617936,9618057-9618502,9618985-9619071,
           9619276-9619416,9620220-9620411,9620491-9620652,
           9621116-9621199,9621329-9621706
          Length = 795

 Score = 27.1 bits (57), Expect = 8.6
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -1

Query: 115 PCTAGLYCLGVITESHIFRKARCTFL 38
           PC AG++  G+  E H  R A C  L
Sbjct: 192 PCAAGIFAHGIEDEFHQVRTAACKSL 217


>01_06_0208 - 27540077-27540992,27541310-27541497
          Length = 367

 Score = 27.1 bits (57), Expect = 8.6
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +3

Query: 210 KTPSAVAGAFSRAWWRW 260
           + P   AG+F   WWRW
Sbjct: 275 RAPPLSAGSFLTGWWRW 291


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,212,911
Number of Sequences: 37544
Number of extensions: 280338
Number of successful extensions: 888
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 866
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 888
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1071221400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)