Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_D11
         (505 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z66515-4|CAA91350.1|  153|Caenorhabditis elegans Hypothetical pr...    66   2e-11
Z69903-7|CAA93776.1| 1607|Caenorhabditis elegans Hypothetical pr...    29   2.5  
Z69660-1|CAA93489.1| 1607|Caenorhabditis elegans Hypothetical pr...    29   2.5  
AF000262-9|AAN60529.1|  820|Caenorhabditis elegans Hypothetical ...    28   3.3  

>Z66515-4|CAA91350.1|  153|Caenorhabditis elegans Hypothetical
           protein R53.4 protein.
          Length = 153

 Score = 65.7 bits (153), Expect = 2e-11
 Identities = 29/61 (47%), Positives = 37/61 (60%)
 Frame = +3

Query: 90  RQYNPAVHGPYDPARYYGKPDTPFSQLKLNEIGSWFGRRSKTPSAVAGAFSRAWWRWQHK 269
           +++N  VHGPY   RYYGK DT F  +KL ++ +W  RR KTPSA    F R  WR  + 
Sbjct: 51  KRWNKNVHGPYCHWRYYGKLDTKFMDVKLGDLPAWMARREKTPSAFYNEFMRNIWRVHNL 110

Query: 270 Y 272
           Y
Sbjct: 111 Y 111


>Z69903-7|CAA93776.1| 1607|Caenorhabditis elegans Hypothetical
           protein F39B1.1 protein.
          Length = 1607

 Score = 28.7 bits (61), Expect = 2.5
 Identities = 16/58 (27%), Positives = 29/58 (50%)
 Frame = +3

Query: 138 YGKPDTPFSQLKLNEIGSWFGRRSKTPSAVAGAFSRAWWRWQHKYVQPKKVGMAPFYQ 311
           +  PD P  Q K+N+I   +   S  PS+ +G+ + +   ++  Y +P + G  P  Q
Sbjct: 34  FESPDEPARQRKINQIKQLYEANSPGPSSYSGSLATSPIDFRPVYNEP-RAGPIPHSQ 90


>Z69660-1|CAA93489.1| 1607|Caenorhabditis elegans Hypothetical
           protein F39B1.1 protein.
          Length = 1607

 Score = 28.7 bits (61), Expect = 2.5
 Identities = 16/58 (27%), Positives = 29/58 (50%)
 Frame = +3

Query: 138 YGKPDTPFSQLKLNEIGSWFGRRSKTPSAVAGAFSRAWWRWQHKYVQPKKVGMAPFYQ 311
           +  PD P  Q K+N+I   +   S  PS+ +G+ + +   ++  Y +P + G  P  Q
Sbjct: 34  FESPDEPARQRKINQIKQLYEANSPGPSSYSGSLATSPIDFRPVYNEP-RAGPIPHSQ 90


>AF000262-9|AAN60529.1|  820|Caenorhabditis elegans Hypothetical
           protein C48E7.8 protein.
          Length = 820

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 16/39 (41%), Positives = 21/39 (53%)
 Frame = +1

Query: 16  GTYSN*FLEKCIGLF*KYGFR*LPQGSIILLYMGLTILH 132
           G+ SN  + KC+ L      R LP  S+ LL+MGL   H
Sbjct: 407 GSSSNFSIIKCLALLGHRCLRLLPALSLYLLFMGLVYNH 445


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,165,369
Number of Sequences: 27780
Number of extensions: 227675
Number of successful extensions: 590
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 561
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 590
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 967231538
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)