Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_D11
(505 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g30420.1 68414.m03718 ATP-binding cassette transport protein,... 27 2.0
At1g20980.1 68414.m02626 SPL1-Related2 protein (SPL1R2) strong s... 29 2.4
At3g10660.1 68416.m01282 calcium-dependent protein kinase isofor... 27 7.2
At1g63560.1 68414.m07185 receptor-like protein kinase-related co... 27 7.2
At2g02835.1 68415.m00229 hypothetical protein 27 9.5
At1g76990.3 68414.m08966 ACT domain containing protein low simil... 27 9.5
At1g76990.2 68414.m08965 ACT domain containing protein low simil... 27 9.5
At1g76990.1 68414.m08964 ACT domain containing protein low simil... 27 9.5
At1g01130.1 68414.m00016 expressed protein ; expression supporte... 27 9.5
>At1g30420.1 68414.m03718 ATP-binding cassette transport protein,
putative contains Pfam profiles PF00005: ABC transporter,
PF00664: ABC transporter transmembrane region
Length = 1488
Score = 26.6 bits (56), Expect(2) = 2.0
Identities = 10/32 (31%), Positives = 16/32 (50%)
Frame = +3
Query: 18 YLLELIFRKVHRAFLKIWLSVITPRQYNPAVH 113
YL + R + +L IW TP+ Y+P +
Sbjct: 921 YLTTEVLRVLSSTWLSIWTDQSTPKSYSPGFY 952
Score = 20.6 bits (41), Expect(2) = 2.0
Identities = 12/46 (26%), Positives = 20/46 (43%)
Frame = +3
Query: 225 VAGAFSRAWWRWQHKYVQPKKVGMAPFYQLLVGSMVFFYAINYGRI 362
VA F+ ++W K++ A +L M+FF GR+
Sbjct: 964 VAVTFTNSFWLISSSLHAAKRLHDAMLNSILRAPMLFFETNPTGRV 1009
>At1g20980.1 68414.m02626 SPL1-Related2 protein (SPL1R2) strong
similarity to SPL1-Related2 protein [Arabidopsis
thaliana] GI:6006427; contains Pfam profile PF03110: SBP
domain
Length = 1035
Score = 28.7 bits (61), Expect = 2.4
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = +2
Query: 131 TLLWKT*YSIQSVEAERNRFVVRSPQQDSVCRGRSFQSSL 250
T L K + SV ER+ +SP QDS RG+ +SSL
Sbjct: 349 TNLEKRTFGFSSVGGERSSSSNQSPSQDSDSRGQDTRSSL 388
>At3g10660.1 68416.m01282 calcium-dependent protein kinase isoform 2
(CPK2) identical to calcium-dependent protein kinase
isoform 2 [Arabidopsis thaliana] gi|9837343|gb|AAG00535;
contains protein kinase domain, Pfam:PF00069; contains
EF hand domain (calcium-binding EF-hand), Pfam:PF00036,
INTERPRO:IPR002048
Length = 646
Score = 27.1 bits (57), Expect = 7.2
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = -3
Query: 245 STESSGHGRRSLAAATEPRTDFVQ 174
S+ S G+G+ S AA+EP TD VQ
Sbjct: 34 SSSSHGNGQVSKEAASEPATDQVQ 57
>At1g63560.1 68414.m07185 receptor-like protein kinase-related
contains Pfam profile: PF01657 Domain of unknown
function DUF26; weak similarity to receptor-like protein
kinase 5 (GI:13506747) [Arabidopsis thaliana]
Length = 273
Score = 27.1 bits (57), Expect = 7.2
Identities = 13/56 (23%), Positives = 26/56 (46%)
Frame = -2
Query: 231 RPRQTESCCGDRTTNRFRSASTD*MEYQVFHSSVQDRKAHVQQDYTALG*SPKAIF 64
+P+ + C DR ++ F S+ + SS++DR + +G SP ++
Sbjct: 3 QPQHMATFCDDRLSDNFTQTSSYKANRETLLSSLRDRSSLGTYSNATIGLSPDTVY 58
>At2g02835.1 68415.m00229 hypothetical protein
Length = 198
Score = 26.6 bits (56), Expect = 9.5
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +3
Query: 87 PRQYNPAVHGPYDPARYYGKPDTPFSQL 170
P +Y ++ PY P PD+PF+ L
Sbjct: 121 PEEYEDSLISPYIPEAVLRSPDSPFALL 148
>At1g76990.3 68414.m08966 ACT domain containing protein low
similarity to uridylyltransferase SP|P56884 from
Rhizobium meliloti; contains Pfam ACT domain PF01842
Length = 453
Score = 26.6 bits (56), Expect = 9.5
Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = -2
Query: 207 CGDRTTNRFRSAST-D*MEYQVFHSSVQDRKAHVQQDY 97
C DR F T M+Y VFH+++ +H Q+Y
Sbjct: 271 CEDRPKLMFDIVCTLTDMQYIVFHATISSSGSHASQEY 308
>At1g76990.2 68414.m08965 ACT domain containing protein low
similarity to uridylyltransferase SP|P56884 from
Rhizobium meliloti; contains Pfam ACT domain PF01842
Length = 453
Score = 26.6 bits (56), Expect = 9.5
Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = -2
Query: 207 CGDRTTNRFRSAST-D*MEYQVFHSSVQDRKAHVQQDY 97
C DR F T M+Y VFH+++ +H Q+Y
Sbjct: 271 CEDRPKLMFDIVCTLTDMQYIVFHATISSSGSHASQEY 308
>At1g76990.1 68414.m08964 ACT domain containing protein low
similarity to uridylyltransferase SP|P56884 from
Rhizobium meliloti; contains Pfam ACT domain PF01842
Length = 453
Score = 26.6 bits (56), Expect = 9.5
Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = -2
Query: 207 CGDRTTNRFRSAST-D*MEYQVFHSSVQDRKAHVQQDY 97
C DR F T M+Y VFH+++ +H Q+Y
Sbjct: 271 CEDRPKLMFDIVCTLTDMQYIVFHATISSSGSHASQEY 308
>At1g01130.1 68414.m00016 expressed protein ; expression supported
by MPSS
Length = 180
Score = 26.6 bits (56), Expect = 9.5
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +1
Query: 178 TKSVRGSVAAARLRLPWPELSVEPGG 255
T S G VAA R+ PW + S E GG
Sbjct: 56 TASASGEVAARRVLPPWMDPSYEWGG 81
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,501,334
Number of Sequences: 28952
Number of extensions: 213323
Number of successful extensions: 586
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 574
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 585
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 898188928
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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