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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_D10
         (654 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z46935-9|CAA87053.1|  523|Caenorhabditis elegans Hypothetical pr...   177   4e-45
Z36949-3|CAA85417.1|  523|Caenorhabditis elegans Hypothetical pr...   177   4e-45
U36187-1|AAC06337.1|  523|Caenorhabditis elegans cyclophilin iso...   177   4e-45
AF421146-1|AAL27008.1|  523|Caenorhabditis elegans cyclophilin M...   177   4e-45
AL031621-2|CAA20934.2| 1000|Caenorhabditis elegans Hypothetical ...    33   0.18 
AC024812-7|AAF59548.2|  419|Caenorhabditis elegans Hypothetical ...    31   0.94 
Z81548-1|CAB04464.1| 1217|Caenorhabditis elegans Hypothetical pr...    30   1.2  
U58746-5|AAB00625.1|  310|Caenorhabditis elegans Hypothetical pr...    29   2.2  
Z71262-4|CAA95814.1|  775|Caenorhabditis elegans Hypothetical pr...    29   2.9  
Z82278-10|CAC15860.2|  390|Caenorhabditis elegans Hypothetical p...    28   6.7  
Z81519-6|CAB04220.2| 1631|Caenorhabditis elegans Hypothetical pr...    28   6.7  
AL132943-14|CAC14395.2|  390|Caenorhabditis elegans Hypothetical...    28   6.7  
AL034543-6|CAJ43443.1| 1631|Caenorhabditis elegans Hypothetical ...    28   6.7  
Z93398-8|CAJ80823.1| 3424|Caenorhabditis elegans Hypothetical pr...    27   8.8  
Z93398-5|CAD90186.2| 3436|Caenorhabditis elegans Hypothetical pr...    27   8.8  
Z93398-3|CAH04742.1| 3322|Caenorhabditis elegans Hypothetical pr...    27   8.8  
Z93398-2|CAH04741.1| 3323|Caenorhabditis elegans Hypothetical pr...    27   8.8  
Z93398-1|CAH04740.1| 3405|Caenorhabditis elegans Hypothetical pr...    27   8.8  
Z92788-8|CAJ80815.1| 3424|Caenorhabditis elegans Hypothetical pr...    27   8.8  
Z92788-5|CAD90175.2| 3436|Caenorhabditis elegans Hypothetical pr...    27   8.8  
Z92788-3|CAH04710.1| 3322|Caenorhabditis elegans Hypothetical pr...    27   8.8  
Z92788-2|CAH04709.1| 3323|Caenorhabditis elegans Hypothetical pr...    27   8.8  
Z92788-1|CAH04708.1| 3405|Caenorhabditis elegans Hypothetical pr...    27   8.8  
U39849-6|AAM81124.1|  642|Caenorhabditis elegans Hypothetical pr...    27   8.8  
U39849-5|AAA81048.2|  663|Caenorhabditis elegans Hypothetical pr...    27   8.8  
AJ505904-1|CAD44515.1| 3436|Caenorhabditis elegans VAB-10A prote...    27   8.8  
AJ505903-1|CAD44514.1| 3436|Caenorhabditis elegans VAB-10A prote...    27   8.8  
AJ505815-1|CAD44323.1| 3436|Caenorhabditis elegans VAB-10A prote...    27   8.8  

>Z46935-9|CAA87053.1|  523|Caenorhabditis elegans Hypothetical
           protein F59E10.2 protein.
          Length = 523

 Score =  177 bits (432), Expect = 4e-45
 Identities = 86/168 (51%), Positives = 112/168 (66%), Gaps = 1/168 (0%)
 Frame = +2

Query: 152 MGKRQHQKDKMYLTYTEWTTLYGGKRSGTATE-EDTTFKRLPFDHCCLCLQPFDDPYCDA 328
           MGK+QHQKDK+YLT +EW ++ GG +  T T  +   FKRLP +HC L L PF+DP C  
Sbjct: 1   MGKKQHQKDKLYLTTSEWKSI-GGHKDDTGTRLQRAQFKRLPINHCSLSLLPFEDPVCAR 59

Query: 329 DGNVFELQAIIDFRKKFKINPVTGKKLDIKTLIKLNFFKNAEDAYHCPVLFKPFTKNSHI 508
            G +F+L AI+ + KK   NP TGK L  K LI L F K  +  + CPV F+ FT +SHI
Sbjct: 60  SGEIFDLTAIVPYLKKHGKNPCTGKPLVAKDLIHLKFDKGEDGKFRCPVTFRTFTDHSHI 119

Query: 509 VAIRTSGNVYSYEAVEQLNIKGKNWXDLVDDTPFAARNDIITIQXPQN 652
           +AI TSGNVYS+EAV++LN+K  +  DL+ D PF  R DII +Q P +
Sbjct: 120 LAIATSGNVYSHEAVQELNLKRNHLKDLLTDVPF-TRADIIDLQDPNH 166


>Z36949-3|CAA85417.1|  523|Caenorhabditis elegans Hypothetical
           protein F59E10.2 protein.
          Length = 523

 Score =  177 bits (432), Expect = 4e-45
 Identities = 86/168 (51%), Positives = 112/168 (66%), Gaps = 1/168 (0%)
 Frame = +2

Query: 152 MGKRQHQKDKMYLTYTEWTTLYGGKRSGTATE-EDTTFKRLPFDHCCLCLQPFDDPYCDA 328
           MGK+QHQKDK+YLT +EW ++ GG +  T T  +   FKRLP +HC L L PF+DP C  
Sbjct: 1   MGKKQHQKDKLYLTTSEWKSI-GGHKDDTGTRLQRAQFKRLPINHCSLSLLPFEDPVCAR 59

Query: 329 DGNVFELQAIIDFRKKFKINPVTGKKLDIKTLIKLNFFKNAEDAYHCPVLFKPFTKNSHI 508
            G +F+L AI+ + KK   NP TGK L  K LI L F K  +  + CPV F+ FT +SHI
Sbjct: 60  SGEIFDLTAIVPYLKKHGKNPCTGKPLVAKDLIHLKFDKGEDGKFRCPVTFRTFTDHSHI 119

Query: 509 VAIRTSGNVYSYEAVEQLNIKGKNWXDLVDDTPFAARNDIITIQXPQN 652
           +AI TSGNVYS+EAV++LN+K  +  DL+ D PF  R DII +Q P +
Sbjct: 120 LAIATSGNVYSHEAVQELNLKRNHLKDLLTDVPF-TRADIIDLQDPNH 166


>U36187-1|AAC06337.1|  523|Caenorhabditis elegans cyclophilin
           isoform 4 protein.
          Length = 523

 Score =  177 bits (432), Expect = 4e-45
 Identities = 86/168 (51%), Positives = 112/168 (66%), Gaps = 1/168 (0%)
 Frame = +2

Query: 152 MGKRQHQKDKMYLTYTEWTTLYGGKRSGTATE-EDTTFKRLPFDHCCLCLQPFDDPYCDA 328
           MGK+QHQKDK+YLT +EW ++ GG +  T T  +   FKRLP +HC L L PF+DP C  
Sbjct: 1   MGKKQHQKDKLYLTTSEWKSI-GGHKDDTGTRLQRAQFKRLPINHCSLSLLPFEDPVCAR 59

Query: 329 DGNVFELQAIIDFRKKFKINPVTGKKLDIKTLIKLNFFKNAEDAYHCPVLFKPFTKNSHI 508
            G +F+L AI+ + KK   NP TGK L  K LI L F K  +  + CPV F+ FT +SHI
Sbjct: 60  SGEIFDLTAIVPYLKKHGKNPCTGKPLVAKDLIHLKFDKGEDGKFRCPVTFRTFTDHSHI 119

Query: 509 VAIRTSGNVYSYEAVEQLNIKGKNWXDLVDDTPFAARNDIITIQXPQN 652
           +AI TSGNVYS+EAV++LN+K  +  DL+ D PF  R DII +Q P +
Sbjct: 120 LAIATSGNVYSHEAVQELNLKRNHLKDLLTDVPF-TRADIIDLQDPNH 166


>AF421146-1|AAL27008.1|  523|Caenorhabditis elegans cyclophilin
           MOG-6 protein.
          Length = 523

 Score =  177 bits (432), Expect = 4e-45
 Identities = 86/168 (51%), Positives = 112/168 (66%), Gaps = 1/168 (0%)
 Frame = +2

Query: 152 MGKRQHQKDKMYLTYTEWTTLYGGKRSGTATE-EDTTFKRLPFDHCCLCLQPFDDPYCDA 328
           MGK+QHQKDK+YLT +EW ++ GG +  T T  +   FKRLP +HC L L PF+DP C  
Sbjct: 1   MGKKQHQKDKLYLTTSEWKSI-GGHKDDTGTRLQRAQFKRLPINHCSLSLLPFEDPVCAR 59

Query: 329 DGNVFELQAIIDFRKKFKINPVTGKKLDIKTLIKLNFFKNAEDAYHCPVLFKPFTKNSHI 508
            G +F+L AI+ + KK   NP TGK L  K LI L F K  +  + CPV F+ FT +SHI
Sbjct: 60  SGEIFDLTAIVPYLKKHGKNPCTGKPLVAKDLIHLKFDKGEDGKFRCPVTFRTFTDHSHI 119

Query: 509 VAIRTSGNVYSYEAVEQLNIKGKNWXDLVDDTPFAARNDIITIQXPQN 652
           +AI TSGNVYS+EAV++LN+K  +  DL+ D PF  R DII +Q P +
Sbjct: 120 LAIATSGNVYSHEAVQELNLKRNHLKDLLTDVPF-TRADIIDLQDPNH 166


>AL031621-2|CAA20934.2| 1000|Caenorhabditis elegans Hypothetical
           protein F28H6.4 protein.
          Length = 1000

 Score = 33.1 bits (72), Expect = 0.18
 Identities = 14/48 (29%), Positives = 28/48 (58%)
 Frame = -3

Query: 403 LSSHRINFKLFSKINDSLQFKYIAVCITVGIVKGLQTKTTVIEWKSFK 260
           ++ HR N+K F++  D + ++++A  I  GIV+   T+     W+ F+
Sbjct: 204 MAPHRRNWKAFTEFEDGIMWQFVADDINAGIVRESYTRNV---WEEFR 248


>AC024812-7|AAF59548.2|  419|Caenorhabditis elegans Hypothetical
           protein Y54E10BR.8 protein.
          Length = 419

 Score = 30.7 bits (66), Expect = 0.94
 Identities = 16/38 (42%), Positives = 22/38 (57%)
 Frame = +2

Query: 446 NAEDAYHCPVLFKPFTKNSHIVAIRTSGNVYSYEAVEQ 559
           + E  Y C V  K FTKNSH+  IR   N+++ E  +Q
Sbjct: 329 SGERPYICNVCGKSFTKNSHV--IRHLKNIHNRELAQQ 364


>Z81548-1|CAB04464.1| 1217|Caenorhabditis elegans Hypothetical protein
            F54F12.1 protein.
          Length = 1217

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = -3

Query: 373  FSKINDSLQFKYIAVCITVGIVKGLQTKTTVIEWKSF 263
            F  +  + Q  Y+ VCIT    KG+  K  V+ W+SF
Sbjct: 1111 FGAVQSAQQLMYLIVCIT----KGVMAKEGVLYWRSF 1143


>U58746-5|AAB00625.1|  310|Caenorhabditis elegans Hypothetical
           protein R05G6.4 protein.
          Length = 310

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 6/58 (10%)
 Frame = +2

Query: 209 TLYGGKRSGTATEEDTTFKRLPFD-----HCC-LCLQPFDDPYCDADGNVFELQAIID 364
           T +  +R   A+   T   RL  D     HCC L LQP  +P     G +F+ +AI++
Sbjct: 15  TYHERRRDAKASGYGTLHARLGADSIKEFHCCSLTLQPCRNPVISPTGYIFDREAILE 72


>Z71262-4|CAA95814.1|  775|Caenorhabditis elegans Hypothetical
           protein F22D6.5 protein.
          Length = 775

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = +2

Query: 410 DIKTLIKLNFFKNAEDAYHCPVLFKPFTKNSHIVAI 517
           +++ L KLN   + ED YHC  LF+ F  ++H+  +
Sbjct: 499 ELEVLRKLNE-ADKEDKYHCLRLFRTFKHHNHLCLV 533


>Z82278-10|CAC15860.2|  390|Caenorhabditis elegans Hypothetical
           protein Y116F11B.2 protein.
          Length = 390

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = +2

Query: 236 TATEEDTTFKRLPFDHCCLCLQPFDDPYCDADGN 337
           T TEE TT    PF  C  CLQ +++  C  +GN
Sbjct: 54  TTTEEPTTTTTAPF--CANCLQVYNND-CFGEGN 84


>Z81519-6|CAB04220.2| 1631|Caenorhabditis elegans Hypothetical
           protein F29C12.3 protein.
          Length = 1631

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +2

Query: 428 KLNFFKNAEDAYHCPVLFKPFTKNSHIVA 514
           K NF +N+E   H P  FK   KN  ++A
Sbjct: 454 KKNFSENSEKTMHLPDKFKSNLKNDFVIA 482


>AL132943-14|CAC14395.2|  390|Caenorhabditis elegans Hypothetical
           protein Y116F11B.2 protein.
          Length = 390

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = +2

Query: 236 TATEEDTTFKRLPFDHCCLCLQPFDDPYCDADGN 337
           T TEE TT    PF  C  CLQ +++  C  +GN
Sbjct: 54  TTTEEPTTTTTAPF--CANCLQVYNND-CFGEGN 84


>AL034543-6|CAJ43443.1| 1631|Caenorhabditis elegans Hypothetical
           protein F29C12.3 protein.
          Length = 1631

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +2

Query: 428 KLNFFKNAEDAYHCPVLFKPFTKNSHIVA 514
           K NF +N+E   H P  FK   KN  ++A
Sbjct: 454 KKNFSENSEKTMHLPDKFKSNLKNDFVIA 482


>Z93398-8|CAJ80823.1| 3424|Caenorhabditis elegans Hypothetical protein
            ZK1151.1h protein.
          Length = 3424

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = +2

Query: 497  NSHIVAIRTSGNVYSYEAVEQLN-IKGKNWXDLVDDTPFAARNDI 628
            N+  V    +G V+++     L  +KGKN+ D +D + F+ R D+
Sbjct: 2509 NAGTVKDTQTGRVHNFLEAGNLGLVKGKNFGDTLDSSLFSGRLDL 2553


>Z93398-5|CAD90186.2| 3436|Caenorhabditis elegans Hypothetical protein
            ZK1151.1a protein.
          Length = 3436

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = +2

Query: 497  NSHIVAIRTSGNVYSYEAVEQLN-IKGKNWXDLVDDTPFAARNDI 628
            N+  V    +G V+++     L  +KGKN+ D +D + F+ R D+
Sbjct: 2521 NAGTVKDTQTGRVHNFLEAGNLGLVKGKNFGDTLDSSLFSGRLDL 2565


>Z93398-3|CAH04742.1| 3322|Caenorhabditis elegans Hypothetical protein
            ZK1151.1f protein.
          Length = 3322

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = +2

Query: 497  NSHIVAIRTSGNVYSYEAVEQLN-IKGKNWXDLVDDTPFAARNDI 628
            N+  V    +G V+++     L  +KGKN+ D +D + F+ R D+
Sbjct: 2407 NAGTVKDTQTGRVHNFLEAGNLGLVKGKNFGDTLDSSLFSGRLDL 2451


>Z93398-2|CAH04741.1| 3323|Caenorhabditis elegans Hypothetical protein
            ZK1151.1e protein.
          Length = 3323

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = +2

Query: 497  NSHIVAIRTSGNVYSYEAVEQLN-IKGKNWXDLVDDTPFAARNDI 628
            N+  V    +G V+++     L  +KGKN+ D +D + F+ R D+
Sbjct: 2408 NAGTVKDTQTGRVHNFLEAGNLGLVKGKNFGDTLDSSLFSGRLDL 2452


>Z93398-1|CAH04740.1| 3405|Caenorhabditis elegans Hypothetical protein
            ZK1151.1d protein.
          Length = 3405

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = +2

Query: 497  NSHIVAIRTSGNVYSYEAVEQLN-IKGKNWXDLVDDTPFAARNDI 628
            N+  V    +G V+++     L  +KGKN+ D +D + F+ R D+
Sbjct: 2490 NAGTVKDTQTGRVHNFLEAGNLGLVKGKNFGDTLDSSLFSGRLDL 2534


>Z92788-8|CAJ80815.1| 3424|Caenorhabditis elegans Hypothetical protein
            ZK1151.1h protein.
          Length = 3424

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = +2

Query: 497  NSHIVAIRTSGNVYSYEAVEQLN-IKGKNWXDLVDDTPFAARNDI 628
            N+  V    +G V+++     L  +KGKN+ D +D + F+ R D+
Sbjct: 2509 NAGTVKDTQTGRVHNFLEAGNLGLVKGKNFGDTLDSSLFSGRLDL 2553


>Z92788-5|CAD90175.2| 3436|Caenorhabditis elegans Hypothetical protein
            ZK1151.1a protein.
          Length = 3436

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = +2

Query: 497  NSHIVAIRTSGNVYSYEAVEQLN-IKGKNWXDLVDDTPFAARNDI 628
            N+  V    +G V+++     L  +KGKN+ D +D + F+ R D+
Sbjct: 2521 NAGTVKDTQTGRVHNFLEAGNLGLVKGKNFGDTLDSSLFSGRLDL 2565


>Z92788-3|CAH04710.1| 3322|Caenorhabditis elegans Hypothetical protein
            ZK1151.1f protein.
          Length = 3322

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = +2

Query: 497  NSHIVAIRTSGNVYSYEAVEQLN-IKGKNWXDLVDDTPFAARNDI 628
            N+  V    +G V+++     L  +KGKN+ D +D + F+ R D+
Sbjct: 2407 NAGTVKDTQTGRVHNFLEAGNLGLVKGKNFGDTLDSSLFSGRLDL 2451


>Z92788-2|CAH04709.1| 3323|Caenorhabditis elegans Hypothetical protein
            ZK1151.1e protein.
          Length = 3323

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = +2

Query: 497  NSHIVAIRTSGNVYSYEAVEQLN-IKGKNWXDLVDDTPFAARNDI 628
            N+  V    +G V+++     L  +KGKN+ D +D + F+ R D+
Sbjct: 2408 NAGTVKDTQTGRVHNFLEAGNLGLVKGKNFGDTLDSSLFSGRLDL 2452


>Z92788-1|CAH04708.1| 3405|Caenorhabditis elegans Hypothetical protein
            ZK1151.1d protein.
          Length = 3405

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = +2

Query: 497  NSHIVAIRTSGNVYSYEAVEQLN-IKGKNWXDLVDDTPFAARNDI 628
            N+  V    +G V+++     L  +KGKN+ D +D + F+ R D+
Sbjct: 2490 NAGTVKDTQTGRVHNFLEAGNLGLVKGKNFGDTLDSSLFSGRLDL 2534


>U39849-6|AAM81124.1|  642|Caenorhabditis elegans Hypothetical
           protein C06A8.1b protein.
          Length = 642

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 14/51 (27%), Positives = 22/51 (43%)
 Frame = +3

Query: 144 HSRWGNDSXXXXXXXXXXXNGQLSTVENVLERLLKKIQHLKDFHSITVVFV 296
           + RWGN S              L+TV N  +RL     +++ F  +  VF+
Sbjct: 379 NGRWGNSSSPAFGDVSSYYLSNLTTVRNADDRLAMFGANIESFEDVKRVFI 429


>U39849-5|AAA81048.2|  663|Caenorhabditis elegans Hypothetical
           protein C06A8.1a protein.
          Length = 663

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 14/51 (27%), Positives = 22/51 (43%)
 Frame = +3

Query: 144 HSRWGNDSXXXXXXXXXXXNGQLSTVENVLERLLKKIQHLKDFHSITVVFV 296
           + RWGN S              L+TV N  +RL     +++ F  +  VF+
Sbjct: 400 NGRWGNSSSPAFGDVSSYYLSNLTTVRNADDRLAMFGANIESFEDVKRVFI 450


>AJ505904-1|CAD44515.1| 3436|Caenorhabditis elegans VAB-10A protein
            protein.
          Length = 3436

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = +2

Query: 497  NSHIVAIRTSGNVYSYEAVEQLN-IKGKNWXDLVDDTPFAARNDI 628
            N+  V    +G V+++     L  +KGKN+ D +D + F+ R D+
Sbjct: 2521 NAGTVKDTQTGRVHNFLEAGNLGLVKGKNFGDTLDSSLFSGRLDL 2565


>AJ505903-1|CAD44514.1| 3436|Caenorhabditis elegans VAB-10A protein
            protein.
          Length = 3436

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = +2

Query: 497  NSHIVAIRTSGNVYSYEAVEQLN-IKGKNWXDLVDDTPFAARNDI 628
            N+  V    +G V+++     L  +KGKN+ D +D + F+ R D+
Sbjct: 2521 NAGTVKDTQTGRVHNFLEAGNLGLVKGKNFGDTLDSSLFSGRLDL 2565


>AJ505815-1|CAD44323.1| 3436|Caenorhabditis elegans VAB-10A protein
            protein.
          Length = 3436

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = +2

Query: 497  NSHIVAIRTSGNVYSYEAVEQLN-IKGKNWXDLVDDTPFAARNDI 628
            N+  V    +G V+++     L  +KGKN+ D +D + F+ R D+
Sbjct: 2521 NAGTVKDTQTGRVHNFLEAGNLGLVKGKNFGDTLDSSLFSGRLDL 2565


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,305,304
Number of Sequences: 27780
Number of extensions: 266451
Number of successful extensions: 784
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 750
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 784
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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