Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_D09
(502 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
S62170-1|AAB26902.1| 112|Drosophila melanogaster acidic ribosom... 102 3e-22
AY069125-1|AAL39270.1| 112|Drosophila melanogaster GH13422p pro... 102 3e-22
AE014134-102|AAF51499.1| 112|Drosophila melanogaster CG4087-PA ... 102 3e-22
Y00504-1|CAA68557.1| 112|Drosophila melanogaster protein ( Dros... 99 2e-21
AY600955-1|AAT12844.1| 1047|Drosophila melanogaster gag protein ... 29 3.5
AE014134-11|AAF51568.2| 2833|Drosophila melanogaster CG31973-PB,... 29 3.5
BT011434-1|AAR99092.1| 765|Drosophila melanogaster RH61815p pro... 29 4.7
AE014134-1179|AAF52446.2| 746|Drosophila melanogaster CG31632-P... 29 4.7
>S62170-1|AAB26902.1| 112|Drosophila melanogaster acidic ribosomal
protein rpA2 protein.
Length = 112
Score = 102 bits (244), Expect = 3e-22
Identities = 54/96 (56%), Positives = 58/96 (60%)
Frame = +3
Query: 120 LDDDVAVTGEKISTILKAAAVXVEPYWPGLFAKALEGINVRDLITNIGSXXXXXXXXXXX 299
+DDDVAVTGEKI+TILKAA V VEPYWPGLFAKALEGINV+DLITNIGS
Sbjct: 17 VDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEGINVKDLITNIGSGVGAAPAGGAA 76
Query: 300 XXXXXXXXXXXEEKXEXXKXXXXXXXXXXMGFGLFD 407
+K E K MGFGLFD
Sbjct: 77 PAAAAAAPAAESKKEEKKKEEESDQSDDDMGFGLFD 112
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = +2
Query: 71 MVSKAELACVYSALIL 118
M +KAELACVY++LIL
Sbjct: 1 MSTKAELACVYASLIL 16
>AY069125-1|AAL39270.1| 112|Drosophila melanogaster GH13422p
protein.
Length = 112
Score = 102 bits (244), Expect = 3e-22
Identities = 54/96 (56%), Positives = 58/96 (60%)
Frame = +3
Query: 120 LDDDVAVTGEKISTILKAAAVXVEPYWPGLFAKALEGINVRDLITNIGSXXXXXXXXXXX 299
+DDDVAVTGEKI+TILKAA V VEPYWPGLFAKALEGINV+DLITNIGS
Sbjct: 17 VDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEGINVKDLITNIGSGVGAAPAGGAA 76
Query: 300 XXXXXXXXXXXEEKXEXXKXXXXXXXXXXMGFGLFD 407
+K E K MGFGLFD
Sbjct: 77 PAAAAAAPAAESKKEEKKKEEESDQSDDDMGFGLFD 112
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = +2
Query: 71 MVSKAELACVYSALIL 118
M +KAELACVY++LIL
Sbjct: 1 MSTKAELACVYASLIL 16
>AE014134-102|AAF51499.1| 112|Drosophila melanogaster CG4087-PA
protein.
Length = 112
Score = 102 bits (244), Expect = 3e-22
Identities = 54/96 (56%), Positives = 58/96 (60%)
Frame = +3
Query: 120 LDDDVAVTGEKISTILKAAAVXVEPYWPGLFAKALEGINVRDLITNIGSXXXXXXXXXXX 299
+DDDVAVTGEKI+TILKAA V VEPYWPGLFAKALEGINV+DLITNIGS
Sbjct: 17 VDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEGINVKDLITNIGSGVGAAPAGGAA 76
Query: 300 XXXXXXXXXXXEEKXEXXKXXXXXXXXXXMGFGLFD 407
+K E K MGFGLFD
Sbjct: 77 PAAAAAAPAAESKKEEKKKEEESDQSDDDMGFGLFD 112
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = +2
Query: 71 MVSKAELACVYSALIL 118
M +KAELACVY++LIL
Sbjct: 1 MSTKAELACVYASLIL 16
>Y00504-1|CAA68557.1| 112|Drosophila melanogaster protein (
Drosophila melanogastermRNA for A-type ribosomal protein
rp21C. ).
Length = 112
Score = 99 bits (238), Expect = 2e-21
Identities = 53/96 (55%), Positives = 57/96 (59%)
Frame = +3
Query: 120 LDDDVAVTGEKISTILKAAAVXVEPYWPGLFAKALEGINVRDLITNIGSXXXXXXXXXXX 299
+DDDVAVTGEKI+TILKAA V VEPYWPGLFAKALE INV+DLITNIGS
Sbjct: 17 VDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEAINVKDLITNIGSGVGAAPAGGAA 76
Query: 300 XXXXXXXXXXXEEKXEXXKXXXXXXXXXXMGFGLFD 407
+K E K MGFGLFD
Sbjct: 77 PAAAAAAPAAESKKEEKKKEEESDQSDDDMGFGLFD 112
>AY600955-1|AAT12844.1| 1047|Drosophila melanogaster gag protein
protein.
Length = 1047
Score = 29.1 bits (62), Expect = 3.5
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = -1
Query: 253 VIRSRTLMPSKALANRPGQYGSTXTAAAFKMVEI-FSPVTATSSSSQDESRVN 98
+I S+ L+P+K N P QY T A K +I FS + S +S N
Sbjct: 255 LIASQNLVPAKTHINSPTQYNDTNATNALKTAKINFSSHSHQSEIKPTQSAKN 307
>AE014134-11|AAF51568.2| 2833|Drosophila melanogaster CG31973-PB,
isoform B protein.
Length = 2833
Score = 29.1 bits (62), Expect = 3.5
Identities = 21/68 (30%), Positives = 26/68 (38%), Gaps = 1/68 (1%)
Frame = -2
Query: 201 ANMALHXQPPLSRWWKFSHQLRQ-HHHQARMRAE*THANSAFDTIFSFERASCRRP*LKR 25
AN A+H P H+ RQ HHHQ R + NS F A R+
Sbjct: 1835 ANPAMHFVSPFKSLENLLHEDRQHHHHQLRTTTRPRYTNSPAFPEFLQTTAKSRKNLFMM 1894
Query: 24 EQARLSSR 1
R SS+
Sbjct: 1895 ASVRNSSK 1902
>BT011434-1|AAR99092.1| 765|Drosophila melanogaster RH61815p
protein.
Length = 765
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = -2
Query: 420 IKLLSQRDRSPCHRRTPRVPPXXFXXSS 337
+ L +RD P RRTPR PP SS
Sbjct: 332 VSALLRRDEPPPQRRTPRSPPLGHLTSS 359
>AE014134-1179|AAF52446.2| 746|Drosophila melanogaster CG31632-PA
protein.
Length = 746
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = -2
Query: 420 IKLLSQRDRSPCHRRTPRVPPXXFXXSS 337
+ L +RD P RRTPR PP SS
Sbjct: 332 VSALLRRDEPPPQRRTPRSPPLGHLTSS 359
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,275,519
Number of Sequences: 53049
Number of extensions: 305472
Number of successful extensions: 781
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 750
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 775
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1784022528
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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